Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          ------->GAMYB                                                                                       <---------ALFIN1                                                                              ------->TEIL                                                                              <---------ARR14(2)                                                              --------->LBD16 <---------ARR11(1)                                                             <---------ANAC55(1)     <-----------GT1                                                             --------->ANAC55(2)  ----------->GT1                                                             <---------ANAC58 --------->ARR11(3)                                                             <---------ANAC58 --------->ARR14(2)                                                             <---------ANAC55(2)<---------ANAC46                                                             <---------ANAC46<---------CCA1(2)                                                    --------->AtLEC2       --------->ANAC58                                           ------->TEIL   --------->GLK1(2)--------->ANAC46 ---ANAC46                           <------ZmHOX2a(2)   <---------GLK1(2) --------->ANAC55(1)   ---- >ZAT14                             --------->ARR11(3)   --------->ARR14(2)--------->ANAC58      <--- >ZAT18                             <---------ARR11(3)   <---------ARR14(2)<---------ANAC55(2)   <--- -ZAT14              --------->GLK1(1)     -------->P   <---------At4g35610--------->ANAC55(2)   ----   gtctgagtttgctagtaactcagatagcctctcacttagatcatcaacctctctatgcagattccgtatgtagttgcacgtatcttgtaacaccctcgct  28002100                                     --------->ANAC46         <---------MYB59                            --------->ICU4                   --------->ANAC55(2)                            <---------YAB1                 <-----------GT1                          --------->YAB1            <---------CCA1(2)                          <--------HAHB4        --------->ANAC58                         <---------YAB1         --------->ANAC46                        ------->TEIL --------->ANAC58  --------->AHL20(1)                          --                     <---------ANAC55(2)     --------->ARR14(2)                               <------ ----->At4g35610     --------->ANAC55(2)     <---------ARR14(2)                               <------ ------ZAT2   <---------ANAC55(2)    --------->ANAC58  <---------AHL20(1)               <---------At4g35610 ------At4g35610 ------->TEIL<---------ICU4--------->ARR14(2)<---------ANAC55(2)     <-------TEIL<--- ----->ZAT2   --------->ANAC55(2)<-----------GT1--------->ANAC58       --------->WRKY12 --------->At4g35610   gctgaaacctgtcaatatgtatcatgtatcattattttcatgccatatatacgcatatatattacataactagttgacttagttagattcagcatacctt  28002200                                                                              ------>ZmHOX2a(2)                                                                              ===================HOX2a_HOX2a                                                                             <------ZmHOX2a(2)                               --------->GLK1(2)                             ====================HOX2a_HOX2a                          ====================================HOX2a_HOX2a   --------->AGP1===========                          <------ZmHOX2a(1)                                 <---------ARR11(3)                       <-----------RAV1(2)                          ------>ZmHOX2a(2) --------->ARR14(2)                    --------->At4g35610                             =============================HOX2a_HOX2a                    --------->ZAT2                                --------->ARR11(3)  <---------ARR14(2)        ------>NtERF2  =======================RAV           --------->ATHB12--------->ARR14(2)  <----   --------->SPL7   <---------ZAT2                      --------->ATHB12    --------->ARR11(3)-------   --------->DEAR3(2)  <---------LBD16                 <---------YAB1 --------->At4g35610 ------>ZmHOX2a(1) ------->ETT(1)     <---------At4g35610                <------ZmHOX2a(2)    <---------ARR14(2)<------ ---ANAC58       --------->LBD16  <---------MYB46(3)  <---------ARR11(3)   --------->GLK1(1) -------- ---ANAC58     ----------->RAV1(2)<-----------RAV1(1) --------->ARR11(3)   <---------GLK1(1) <------- --------HVH21 ===============================RAV  --------->YAB1 <---------ARR11(3)  --------->ARR11(3)   gtcggaacgacgactgtccctgagctcaggaagaagctgttgcaacttgataatcagatcattgatttgatcttctgagatccttgaagttcctgatgat  28002300                           <---------AHL20(2)                     ------>NtERF2                    --------->LBD16                    <---------ETT(1)                    --------->ANAC46 ==================HOX2a_HOX2a                                                       <----------DOF2 -----WOX13(1)     --------->HSFB2a(2)                                       ---------->DOF2 -->ATHB12         <---------HSFB2a(2)                                    --------->ANAC58 ---ICU4    ------>ZmHOX2a(2)                                             --------->ANAC58 ->ICU4   --------->ARR11(3)                                          --------->CCA1(2) --YAB1   <---------ARR11(3)                                 ----------->HVH21       <---------DAG2   tgcctcgaacgtgatcttcttcccgacatttttttgtagaatattgttcaacaagtagtaagagtgacagagatagaagcaaaggcactttatcggtgaa  28002400                                       ---------->DOF2                                              <                                    <------NtERF2                                                ----                                   --------->LBD16                                               ----                            --------->ARR14(2)                                                  -----               ----------->GT1    --------->LBD16                                               -----              <---------TOE1(3)   --------->RAP2.6(2)                                         <------              <---------TOE2(3)   <---------ANAC46                --------->DAG2            ---------             <---------ANAC46    <---------LBD16                 ---------->DOF2  *TSS      <--------        <---------ANAC46    <---------ARR14(2)              ----------->GT1      <---------TOE2(3) <-   acaggttatggagtttagggtaacacagaagttatgccggaaaaagaagagagagagatagatagagaaaagttgatagtatgaaggaaacaagtgaagt  28002500                                                                                          <----------                                                                                          --------->GLK1(2)                                                                                          ------->TEIL                                                                                          <---------ARR11(1)                                                                                          <---------ARR14(2)                                                            --------------->AGL15         --------->ARR14(2)                                                            <---------------AGL15        <---------CCA1(2)                          <---------AHL20(2)               <-----------------AGL2        <---------ARR14(1)                         <---------YAB1                    <-----------------AGL3      <---------ANAC58 <-------GAMYB        <---------YAB1                       ----------------->AGL3<---------ARR11(3) ---------MYB46(3)    <---------AHL20(2)                <----------DOF2          <---------AHL20(2) ----->MYB52(1)       --------->AHL20(2)               <---------ANAC58          --------->AHL20(2) -------->AtMYB77  <----------DOF2                     <---------ANAC58          --------->AHL20(1) ------>TGA1    --------->ARR11(3)               <---------AHL20(2)              --------->ARR11(3) ------>HVH21   <---------ARR11(3)              --------->AHL20(2)               <---------AHL20(1) ---O2         <------MYB83                 --------->AHL20(1)                  --------->AHL20(2) >ZAT14       --------->MYB59               <---------AHL20(1)              --------->AHL20(2) -ZAT14   <---------TOE2(3)                --------->AHL20(2)  <---------YAB1 --------->AHL20(2) --------ANAC46<------MYB46(1)      <---------YAB1 <------------CBF    ----------->GT1 <---------ANAC58   gacggttgtatttatgtaggtctttttattatttgtttatgaaaaatatataaaattgctttcttattttagttagaaaaaaatatattgcgaatcttat  28002600                                                                                          ------>ZmHOX2a(2)                                                                                         <------ZmHOX2a(2)                                                                                        <---------AGP1                             ------>ZmHOX2a(1)                                          <---------ARR11(3)                             ----------->HVH21                                <---------------AtSPL8                           --------->At4g35610                             <---------AHL20(2)                       <---------ALFIN1      --------->YAB1                --------->AHL20(2)                     ------>NtERF2          <---------YAB1                <---------AHL20(2)             --------->AHL20(2)     <----------DOF2             --------->GLK1(2)       --------->AGP1             <---------AHL20(2)<<<<<<<GRF7--------->YAB1        --------->ARR14(2)      --------->ARR11(3)             --------->YAB1----------->RAV1(2)                  <---------ARR14(2)<-------TEIL -ARR10  <---------AHL20(2)<---------At4g35610                 <---------GLK1(2)  ------->TEIL   ttttcaaatattgaattatatgccccctctcctgacaacttttgttataatagaacgatttcagagaatctcgtattttaaatgtacatagatctaaatt  28002700                                                                          <---------AHL20(2)                                                                        <---------YAB1                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)             <---------AHL20(1)                                      <---------AHL20(1)             --------->AHL20(1)                               --------->At5g28300          --------->YAB1                                     <---------ANAC46          <---------AHL20(2)                                 ----------->GT1          --------->AHL20(2)                                 --------->TOE2(3)       --------->YAB1                                 --------------->AGL15      <---------YAB1                                  <---------------AGL15        <---------ANAC58  <------MYB46(1)                                    <-----------------AGL1        <---------ANAC58  <------MYB83                                     <-----------GT1   --------->AHL20(1) <----------DOF2  ----------->GT1        ------->TEIL           <---------ICU4--------->LBD16<---------AHL20(1)    --   tgctaggtataataatatatatcgttgaatctagccaaaacatatatgaaaaattaccctataccgtaaaatttattaatatgtttcgagctttgaattt  28002800                                                                                   --------->ARR11(3)                                                                                   <---------ARR11(3)                                                                                  <---------CCA1(2)                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)                                                                          <---------ICU4                                                                          <--------ATHB1                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                          --------->ATHB51                                                     <-----------GT1     --------->ICU4                    --------->AHL20(2)              <-----------GT1    --------->YAB1                    --------->AHL20(1)     --------->ARR11(3)       --------->TOE2(3)                    <---------AHL20(1)     <---------ARR11(3)       --------->TOE1(3) ------->ZAT6      <---------CCA1(2)     <---------TOE2(3)    <---------ICU4 <---------AHL20(2)   gacactcggaccttgcagttcatatattagagttctaacttctaaggtctatttttaacattcttcattaccttaataatttatatatcttcaacttagt  28002900                                                                            --------->ANAC55(2)                                                                            <---------ANAC55(2)                                                                         --------->TGA2(2)                                                                        <---------RAP2.6(3)                                                                        <-----------HVH21                                                                       --------->bZIP60(2)                                                    <---------AHL20(2) --------->bZIP60(1)            --------->AHL20(2)                  <---------AHL20(2)     --------->ANAC58       <---------ANAC55(2)                     <---------AHL20(2)      --------->ANAC58       <----------ID1                     <---------AHL20(1)           --------->ANAC46       <---------YAB1     ---------->DOF2 --------->AHL20(1)          ------->TEIL <---------YAB1      ----------->GT1 <---------AHL20(2)      --------->MYB46(3)                     - <---------AHL20(2)<------ZmHOX2a(1) --------->AHL20(2)      --------->DEAR3(2)                     -   ttttttattacgaaaaaaataggaagtgaaaagaaacattttaatattttttattttatacgaacagacatggacgtcatgtaacagaaataaacatttg  28003000  Previous    Next  AGI:  At1g74500.1    Description:  bHLH family protein. similar to bHLH family protein [Arabidopsis thaliana] (TAIR:AT3G47710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62531.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 28001836    to: 28002482    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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