Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                ----------->GT1                                             ----------->GT1                                            --------->DAG2                                          ---------->DOF2                                        --------->AtMYB61       ---------->DOF2           --------->ANAC46  <---------------AGL15          --------->At5g28300                 -----      <----------DOF2       ----------------->AGL1         ----------->GT1                    ------- ->HSFB2a(2)                ----------------->AGL3  <---------AHL20(2)        --------->TOE2(3) ----- --HSFB2a(2)  <---------AtLEC2   <---------ATHB12   --------->AHL20(2)        --------->TOE1(3) -----   attctaaactttcactgcatgaaaactgtttccaaatgaagaccaaaagggtaattaaacactgtgaaaagcctggtataccttcaacatcatcaaacaa  27904200                                                                             ---------->DOF2                                                                           <---------AHL20(2)                                                                         --------->CCA1(2)                        --------->LBD16                       --------->At4g35610 ---->ANAC58           --------->LBD16                        <---------At4g35610                 <-- --->DOF2             <---------LBD16               --------->MYB52(1)  <---------ARR11(3)    <------ ---->ANAC58          --------->LBD16        --------->ARR11(3)         --------->ARR11(3)   -------- ---->ANAC46         <---------LBD16         <---------ARR11(3) ---------->DOF2           <----------DOF2   gccattgaattcgttgtatatttccccggataagttcaaacttcgaagctcttcaaacggatgcagcaaagaaagatttaaaagagaactctctttaaag  27904300                                            --------->ZAT18                                            <---------ZAT14                               <---------ALFIN1                                      --------->ATHB12   ----------->HVH21          --------->DEAR3(1)                                     <--------HAHB4 <---------At4g35610    --------->GLK1(2)   <---------ZAT18                          --------->YAB1 -----TEIL     <---------HSFB2a(1)      --------->ATHB12        ----------->RAV1(1) <---------YAB1 ---TOE2(3)  ---------->DOF2  <---------ZAT18     ---------->DOF2  ----------->RAV1(1)--------->TOE2(3) -->DOF2--------->MYB52(1)  ------>NtERF2 <---------WOX13(1) --------->ANAC46 <----------DOF2   ttcgtctgaccaatggaaagctcgataatccgcccacttgtttgattgcacttaaggccctcccagcgacaacaattgctctttgtatcattagtccaag  27904400                                                      <---------At4g35610                                                      --------->At4g35610                                                 <---------ANAC58                      <---------ARR14(2)         <---------ANAC58                      --------->ARR14(2)     ------->TEIL                   <------NtERF2          <---------ANAC55(2)               <----------DOF2            <---------WRKY38(1)           --------->ANAC55(2)           <----------DOF2           --------->WRKY18(1)         <------ZmHOX2a(2)           <----------DOF2              -----          <-----------HVH21           <---------ARR11(3)      ---------->DOF2                   <----     <---------ZAT14<---------ALFIN1  --------->ARR11(3)   ----------->RAV1(1)                 <-----   tagggagaacagagtcaaggccccaatctgcagtttttgagatcatgtatttcttgagctccaacaaagctttcctttctttttcaatacagcatttgta  27904500                                                                                --------->YAB1               --------->ZAT6                                               <---------------AGL15       <---------REM1(1)                                           <---------MYB46(3) --------->ANAC46    --------->YAB1                     ------>MYB46(1)     --------------->AGL15 ---->ARR14(2)------>MYB83                    --------->LBD16    <---------MYB52(1)      <---------GLK1(2) -----ARR14(2)------>MYB46(1) <---------CCA1(2)         ------>MYB83       ----------------->AGL2 ----CCA1(2) ----------->RAV1(1)        ----------->HVH21  <----------DOF2 ----------------->AGL3   tccacgtagttgtaccaacagtagcataacccatatcaggttttgacccgagaacaccttcctttccattggttagagccaaaaatagtcagaaacttca  27904600                                                  <---------At4g35610        --------->ANAC58                                                  <---------ZAT14            --------->ANAC58                                           --------->ARR14(2)         ----------->GT1                                           <---------ARR14(2)      --------->ARR14(2)                                        --------->YAB1             <---------ARR14(2)            ----                                      --------->ANAC58      ---------->DOF2 --------->DAG2       <---       ----------->GT1            <-----------GT1 --------->ZAT14 <------ZmHOX2a(1)              ----     <------------CBF     <-------TEIL--------->ANAC58  ----------->HVH21  ---------->DOF2  ---------   aaatttggattgtaagtttagacatatattcatgttttacaagcatatacactgctgtttgacaaagaggaaatggaaaaagcaagttgcataagaaaat  27904700            ---------->DOF2         ----------->TBP       <-----------TBP       --------->AHL20(2)       <---------AHL20(2)     <-----------TBP     <---------AHL20(2)                                               <---------YAB1     --------->AHL20(2)                                             --------->YAB1   ----------->TBP                                                  <---------AtLEC2   --------->AHL20(2)        --------->DAG2                <---------ANAC58  --------->AHL20(1)        ---------->DOF2                <---------ANAC46  <---------AHL20(1) --------->ATHB12        ----------->HVH21 <---------ANAC58       <---------TOE2(3) ----->AHL20(1)     <---------ATHB12       <---------At4g35610 <---------ANAC58  --------->ANAC58 ------AHL20(1)   --------->WOX13(1)       --------->At4g35610<---------MYB46(3) --------->ANAC58 ----->AHL20(2) ------------>CBF      <---------At4g35610  <---------ANAC58--------->DAG2 >AHL20(2) <---------AHL20(2)<---------------AtSPL8   <-----------RAV1(1) ---------->DOF2           <   ataatatatatatataaagtcaatctttggaaaagtactcatctcatatgacatatttgtggggtgcttagcatgataaagttaagcaaaggtttaagca  27904800                                   ------------>CBF                                 ----------->HVH21                               --------->O2                               <---------TGA1a     ---------->DOF2           --------->TGA1a     ====================================bZIP_DOF              --------->ZAT14  --------->MYB52(1)           --------->bZIP60(2)             <---------ZAT14 ------->GAMYB<------------CBF <---------O2            --------->YAB1 ========================================MYC_MYB  <---------YAB1                                   <- ---------MYB52(2)        <-----------GT1<-----------GT1       --------->REM1(2)    <-----------GT1--   caactaacaaagacaaaattgttggaattagccacatgacaatttactcattctgaataatacagtgtagagtctgccataacttatttctatacttcaa  27904900           --------->DAG2          ---------->DOF2                                          --------->YAB1      <---------TOE2(3)                            <---------AHL20(2)    --------->AHL20(2)                      --------->bZIP60(1)   <---------YAB1    <---------AHL20(2)                      <---------bZIP60(1)  --------->AHL20(2)   --------->ICU4                      <---------bZIP60(1)     <---------MYB52(1)   <---------ATHB12        ---------->DOF2 <---------ARR11(3)----------->GT1 --------ZAT18------------------------>ANAC81     <---------AHL20(1)            ------->TEIL   ------ ------->ZAT18--------->ALFIN1         --------->bZIP60(1)------------>MYB.PH3(1)            <-------   gtgcaattaatgtaaagtggaacaagagtaaaagaacgatgacatgatatcatatatttgaaaccgttataatagatagatgaatgttatgcagggttag  27905000                        <------ZmHOX2a(1)                      --------->LBD16                                 ----------->GT1                     <---------HSFB2a(2)                            ---------->DOF2                    ------>ZmHOX2a(2)                          ----------->GT1              <---------ANAC55(2)                   <---------KAN4(2)--------->DAG2 --->MYB52(2) --------->ANAC55(2)      ---------->DOF2   --------->YAB1                             - -P <---------REM1(2)--------->HSFB2a(2)    ---------->DOF2 --------->MYB52(1)           <---------YAB1   tcagtcttcacacattatgtgatccaggacaaatattaaactaaagaaaagaagaataaacataatggaaaaaagtcaaaaactatttcttctaattagc  27905100  Previous    Next  AGI:  At1g74180.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G25470.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G49290.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G74190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41813.1); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 27900858    to: 27904569    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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