Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->ZAT18                                                                    <------NtERF2                                                                   <<<<<<<<<AtERF-4                                                                   <---------ERF1                                                                   <---------MYB46(3)                                                                   <---------RAP2.3(1)                                                                   <<<<<<<<<AtERF-5                                                                   <<<<<<<<<AtERF-3                                                                   ------>NtERF2       <-------GAMYB                                               <<<<<<<<<AtERF-1      <---------MYB46(3)                                           <<<<<<<<<AtERF-2      <-----------RAV1(1)                                         <---------RAP2.3(2)  <------MYB46(1)                                                 <---------DEAR3(1)  <------MYB83                 >>>>>>>ZML2                        <---------RAP2.3(3) --------->MYB59        --------->DEAR3(1)                        --------->ATERF1(2)           ----- ---------MYB55(1)     <------NtERF2                              <---------RAP2.6(2)  <---------MYB52(1) --------MYB52(1)     ------>NtERF2                               <---------ATERF1(2)  --------->ARR14(2) ------ANAC55(2)      --------->ABI4(1)                          --------->ATERF1(1)   <---------ARR14(2) ----->ANAC58        <---------ALFIN1            --------->ICU4  --------->RAP2.6(3) --------->DEAR3(1) ----->ANAC55(2)     --------->DEAR3(1)    <---------LBD16     <---------DEAR3(1)   <------NtERF2---- ----->ANAC58     --------->ANAC46      --------->ARR11(3)     --------->ALFIN1    --------->LBD16 >bZIP60(1)       --------->ANAC58      <---------ARR11(3)   --------->ALFIN1<---------GLK1(1)------>ZmHOX2a(1) >TGA2(1)         --------->ANAC58  --------->At4g35610      <-----------RAV1(1)   ------>NtERF2----- -TGA2(1)<---------REM1(1)     <---------HSFB2a(2)       ---------->DOF2  <---------ZAT18  ------>ZmHOX2a(1) -bZIP60(1)      --------->SPL7--------->HSFB2a(2)--------->ATHB12<---------ANAC46--------->ANAC46   cgttaggtctgttgtagggaacgccaccgcgttctagcagaagaactcggaaagattgcgaaagtgtggcggctagtggacatcccgccgttcctcctcc  27481800                                                                                 --------->HSFB2a(1)                                     --------->At4g35610                         <---------HSFB2a(1)                           --------->ANAC58                           --------->ZAT2          -------                           --------->ANAC58                           <---------ZAT2   ----------->RAV1(1)                           --------->ANAC46          ------->TEIL     <---------At4g35610     -------                      ------>ZmHOX2a(1)           <---------YAB1      --------->At4g35610--------->ZAT6     --------->ANAC55(2)--------->DEAR3(1)  --------->SPL7        --------->LBD16<---------HSFC1(2)     <---------ANAC55(2)----------->HVH21<---------ANAC46        <---------LBD16 --------->HSFC1(2) ------>HVH21        --------->TOE1(2)   <---------ANAC58       <---------LBD16 <---------TOE1(2) -->NtERF2 --------->YAB1------>NtERF2   <---------ANAC58  --------->ANAC58     <---------TOE2(2) ---->DEAR3(1)       --------->TOE2(2)<---------MYB52(1)   --------->ANAC58  <---------MYB52(2)   gacgattatgtaatcgtagtaatcctccgacgcaaaatcagttgcgttcgatatgaatcgcatgaaaccgggagctgcaacgaaggttccaacagtaaga  27481900                                                                                                -----                                                                                            ---------                                                                                        --------->ANAC58                                                      --------->YAB1                    --------->ANAC46                 --------->GLK1(2)       --------->At4g35610                            --------->ANAC58       ---------->DOF2                  --------->ANAC58       <---------ANAC58     --------->CCA1(2) -->ANAC58      <---------GLK1(2)       --------->ANAC58       <---------ANAC58---------------------- -->ANAC58    ----------->ARR10   <---------TOE2(3)  <------ZmHOX2a(2)       ---------->DOF2<--------   aacaacaatgaaagagaagaatctcaaaatcaaattagggataagctaaacatcgatcatcgttttcttgctattactcaaaagcgatacaaggaaatca  27482000                                    <---------YAB1                                <---------GLK1(2)                                --------->ARR11(3)                                                  >    --------->TOE2(3)         <---------ATHB12  --------->YAB1                          <---------ANAC46 ----->DOF2                 ---------->DOF2   --------->ANAC58               <---------HSFB2a(2)    < >GLK1(1)                 <------NtERF2       --------->ANAC58               --------->HSFB2a(2)    < -->ANAC81               ------>NtERF2 <---------YAB1        --------->GLK1(2)       --------->TOE2(2) -GLK1(1)              ---------->ID1--------->YAB1         <---------GLK1(2)<---------LBD16        <   aagaaacctcatcaaaaacttcttcgtcgccaaagattatgatgtttcaagcattaacatgagattctacagaaattttctcggaaacttacgtcgatta  27482100                                                           --------->REM1(2)                                                           <---------ZAT14                                                           --------->ZAT14                                                          --------->ALFIN1 <-------MYC3                                           <---------ANAC46 ------->MYC3                                           --------->DEAR3(1) >>>>>>>CAMTA3                                          <---------ANAC58               <-----------TGA1 ---------O2  ---------->DOF2         >>>>>>>>>TBF1     <---------ANAC58           <---------MYB52(1) ---------ANAC58             <---------------AGL15     <------NtERF2         --------->WOX13(1) ---------ANAC58         XXXXXXXXXXXXXXXXXXXX>MIR830  --------->ZAT18     --------->GLK1(2)   acgcgtggccttgcattagagcgatgaactactccaagaagaagaagcactacgagcgccgtgtagagaagagaagaatcaatccgtttcgtcattctcg  27482200                      --------->ZAT2                      <---------ZAT2                      <---------At4g35610         --------->DAG2                 --------->HSFB2a(2)             ---------->DOF2                 <---------HSFB2a(2)          <---------HSFB2a(2)           <---------ARR14(3)                 --------->HSFB2a(2)           <---------ARR11(3)                <---------LBD16           --------->ARR14(3)       --------->AHL20(1)           --------->ARR14(2)       <---------AHL20(1)           <---------ARR14(2)       <---------AHL20(2)     <---------HSFC1(2)           <---------GLK1(2)        --------->AHL20(2)     --------->HSFB2a(1)                      -           --------->ARR11(3)      <---------AHL20(2)      <---------HSFB2a(1)               --------    <-------GAMYB<---------LBD16   --------->AHL20(2)     ----------->ARR10              --------->DAG2   <-----------RAV1(1)--------->At4g35610   <---------LBD16--------->HSFC1(2)           ---------->DOF2   ttcttctgttgaagattttctcggagctgatagaaaattaaattttctcgggaaagtgagaagtttctcagttagagagagaaacagagtaaaagtagtt  27482300                              --------->GLK1(2)               <---------GLK1(1)                             <---------GLK1(2)            --------->HSFB2a(2)                             <---------ARR14(2)           <---------HSFB2a(2)                        <-------GAMYB                    <---------LBD16               --------->DEAR3(1)                       <---------MYB46(3)             --------->At4g35610            <---------At4g35610                      <---------ANAC46                <---------ZAT2                 --------->At4g35610                <---------AHL20(2)                    --------->ZAT2                --------->DEAR3(1) --------->DOF2--------->AHL20(2)                     <---------At4g35610        --------->YAB1<----- --->GT1       <---------AHL20(2)               <-----------ARR10        ---------->DOF2 <------NtERF2   aaaaaagaagactcaaattaaatggcgcttggattctgttatagagagagtttctcagctctggaactctgatataaaagtaatcacagccgtcgatgag  27482400                                                                                       <---------MYB52(1)                                                                                       --------->DOF5.7(2)                                                                               ----------->HVH21                                                                           <---------AHL20(2)                                                                          --------->AHL20(2)                       <---------MYB46(3)                ----------->GT1  <---------AHL20(2)                     <-------GAMYB                  <---------ZAT14       <---------AHL20(1)   ------                    <---------MYB46(3)              --------->ZAT14       <---------ARR11(3)  -------                  <---------At4g35610           <---------ALFIN1          --------->AHL20(1)  <------                  --------->At4g35610         <----------DOF2             --------->ARR11(3) --------               =================================HOX2a_HOX2a         --------->ANAC58  <-------GAMYB               <------ZmHOX2a(2)            --------->At4g35610     --------->ANAC58<------NtERF2              --------->ARR11(3)            <---------At4g35610   <---------ANAC58 ------>NtERF2 ----TOE2(3)----------->ARR10            ------>ZmHOX2a(1)        <---------ANAC58--------->ANAC46   gtttagaccaagttgagatcagcggttgtcaagagaagtagtcctgagctctaccgcagtggataatagcatgcaatatatttgacgccgttagcaaccg  27482500                                                                 --------->LBD16                                                             --------->GLK1(2)                                                         --------->YAB1         <---------TOE1(3)                  <------NtERF2                     ------------>CBF------------>CBF --------->HSFB2a(2)                              ------->GAMYB<---------LBD16  <---------TOE2(3) ->GAMYB   <---------DOF5.7(2)  <---------------AtSPL3   --------->AHL20(2)--------->LBD16 -->MYB46(3)<---------TOE2(3)   <---------------AtSPL8  <---------ATHB12 <-----------------AG <------ZmHOX2a(1) ------AtMYB77  <---------DEAR3(1)  --------->MYB52(1)--------->WOX13(1) <---------LBD16 --------->MYB52(1) >P     <----------DOF2        ---------->DOF2   <------------AtMYB77    <-----------------AGL1   tctctggaccctttaacgtcgtcgtcttgttgtaaaagtaccgatttgataactgccaatcaaattccggttcaatccggttaagggaagataacaggat  27482600       <-----------HVH21     ------->PIF5     <-------PIF5     <-------MYC2     <-------MYC4     ------->MYC2     ------->MYC4     ------->MYC3     <-------MYC3    <<<<<<<<<<HY5    <--------ABF1    --------->bZIP60(2)    <<<<<<<<<<AtMYC2                          --------->ZAT6    <---------ANAC55(2)           --------->ETT(2)    <<<<<<<<<<ABI5                <---------ETT(2)    --------->O2                <---------ZAT14    <---------O2--------->ALFIN1--------->ZAT14    --------->TGA1a <---------ZAT18          <---------YAB1                                     <----    <---------TGA1a<---------ANAC46     <---------ZAT6                             <---------ICU4    --------->ANAC55(2)        *TSS>>>>>>>>>>>>>>>>>LFY                      ----------->GT1   <-----   ttagccacgtgtcatgaggttgtgcagattagactgtagccagtgttatcactaccgtctaaacacagagagagagagagagcaaaaatggctatggcga  27482700  Previous    Next  AGI:  At1g73050.1    Description:  (R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative. similar to glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT1G12570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63379.1); contains InterPro domain Glucose-methanol-choline oxidoreductase, C-terminal; (InterPro:IPR007867); contains InterPro domain Glucose-methanol-choline oxidoreductase; (InterPro:IPR012132); contains InterPro domain Glucose-methanol-choline oxidoreductase, N-terminal; (InterPro:IPR000172) Range:  from: 27480226    to: 27482195    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g73060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49401.1) Range:  from: 27482631    to: 27485109    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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