Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ANAC58                                                     <---------ANAC46                                                     <---------ANAC58                                                    <-----------------------TaNAC69(2)                                                 ---------->DOF2                                               ============================HOX2a_HOX2a                                               ------>ZmHOX2a(1)                                           <---------ARR14(2)                                           --------->ARR14(2)                                           <---------ARR11(3)                                           --------->AGP1---------->DOF2                                           --------->ARR11(3)                                          --------->GLK1(1)                       <----------DOF2       ----------->GT1                    <---------GLK1(1)             <----------DOF2           <--      --------->AtLEC2       <----------DOF2<------ZmHOX2a(2)       ------>ZmHOX2a(2)           -----    <---------bZIP60(2)    <---------HSFC1(2) --------->TOE2(3)   <---------ARR11(3)           <----- ----------->HVH21         --------->HSFC1(2)------>ZmHOX2a(2)    --------->ARR11(3)    <----------DOF2 ---------WOX13(1) ---------->DOF2       ----------->ARR10       <------------------------ANAC81<----   tgactgacatggaaaaacagagaaagggaagcttttgaagagtgagatcctaaaagcgtgaaagctctgatcttctttttctcactttcactttgagaat  27449900                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                        <----------DOF2                         <----                                                     ---------->ID1                             -----                                                 <----------DOF2                                <----           <----------ID1                        <---------DAG2                                 -----         ---------->DOF2                   --------->ALFIN1                             <---------YAB1 ---------GT1                              <-----------RAV1(1)--------->YAB1            ------>ZmHOX2a(1) ---->HSFB2a(1)       <---------------AtSPL8    <---------ANAC58                <---------WOX13(1)<-- ----KAN4(2)          --------------->AtSPL8    <---------ANAC46              --------->ATHB12  <---- -----HSFB2a(1)---------->DOF2  <-----------GT1 <---------ANAC58             <---------YAB1 <--------   tttctgtctgagaaagacaaagaatgggtactattttctctccctgtgtggctttttccttttatcagatttatggcatttgattgattcctgatagttg  27450000     <----------DOF2 ---------MYB46(3) ---------DEAR3(2) ------MYB83 ------MYB46(1) ------->MYB111(1) --------AtMYB61 ----GAMYB ------ANAC58                  <-------TEIL ------ANAC58                 <------ZmHOX2a(2) --MYB83                     <---------ARR14(2) ---->MYB52(2)               <---------ARR11(3) --MYB46(1)                  --------->AGP1     <---------DAG2                              --------- ---->MYB55(2)               --------->ARR14(2) <----------DOF2                   <---------YAB1 ------P ---------->ID1      --------->ARR11(3)<---------DAG2                  --------->ICU4  ------ -----MYB46(3)     --------->ANAC58      --------------->AtSPL8     ---------->DOF2--------->ATHB12 -MYB46(3)         --------->ANAC58--------->ARR14(2)      <----------DOF2  <---------YAB1  <--------   gttggttctttgttgtttcgctagcaatgtagatccatatatacgagtacctttttctctgctttcttcagaaagaatgtcattgttattggtttcagaa  27450100                                                                            <-------GAMYB                                                                           --------->MYB55(2)                                                                           <---------MYB46(3)                                                                           --------->MYB111(2)                                                                         <---------ANAC58          <-                                                                         <---------ANAC58  <---------                                                                         <-------GAMYB     ----------                                                                        <---------MYB46(3)--------->TOE2(3)                        --------->YAB1                                 <---------AtMYB61--------->ARR11(3)              <---------ANAC58                                       <----------DOF2    <---------ARR11(3)              <---------ANAC46                                      <---------ANAC58   --------->CCA1(1) >HSFB2a(2)   <---------ANAC58                                      <---------ANAC58   --------->RVE1(1) ---->DOF2   <-----------------------TaNAC69(2)                 <---------ANAC58   <---------AHL20(2) -HSFB2a(2) <<<<<<<<<<AtWER                                     <---------ANAC58   --------->AHL20(2)   agtaatgcctctgcatgcgtaaacaatactaagaccaagtcgtttctctcgtttcatttcaaaattgtttgctttggttgttgaataaaatatctcaatt  27450200                                      <-------TEIL                                              <----        <------------CBF        <---------ANAC58               ---------->DOF2          <---------At4g35610 -----ZmHOX2a(1) ---------->DOF2<---------ANAC58          ----------->GT1               --------->At4g35610 ------AGL15<---------ANAC46 ----------->HVH21          <-------TEIL               --------->ZAT14 -->CBF--------->ATHB12 <----------DOF2              --------->At4g35610   *TSS    <---------ZAT14   aggagacagtgattgtgtttaaagggcttctgtgacgagctacataatccatattagatgcagataaaagcgagggatgttgttctgtacagctcatcga  27450300                                                                               <-------GAMYB                                     --------->TOE2(3)                        <-----------RAV1(1)                               <---------ICU4----------->GT1        <----------DOF2          <-----------GT1     <------ZmHOX2a(2)                   <---------ANAC58                 --    ----------->GT1   --------->ANAC58   <---------TOE2(3)        <---------ANAC58             <----- -----LBD16           --------->ANAC58  ---------->DOF2      <-----------RAV1(1)         <---------YAB1   cggagatggtatatacaatgtctctcgcatcgatcatttcattaaagatgtgaaacttgcagactgtggcctttcttatgctgttgtctctattatgggt  27450400                                                     --------->GLK1(2)                                              --------->YAB1                                              <---------ICU4      --------->MYB52(1)                     --------->ICU4 ---------->DOF2                           --------->YAB1 ---->ZmHOX2a(1)                   ------->TEIL  --------->YAB1        --------->MYB59 ----PCF2            <----------DOF2 <----------DOF2<---------GLK1(2)<---------MYB52(1)            --   cctcaaagtagcggtatgcattcctttagagaagatggacttttgtaataatcagaatttgtttgaatgtagttagttcatttacagaaatgttttgtga  27450500             --------->ZAT14             --------->ZAT18             <-------TEIL             <---------ZAT18             <---------ZAT14                                                                      <--         --------->DAG2                                                                          <---         --------------->AtSPL8                                             --------->ATHB12     <---         --------------->AtSPL3                      <---------------------WRI1    <---------At4g35610         <---------------AtSPL8            <----------DOF2                 <---------YAB1   ---------        ---------->DOF2                    <---------DAG2              <------MYB46(1)      <-------- --------->HVH21      <-----------GT1 --------->MYB46(3)  <-------TEIL <------MYB83--------->At4g35610   tttgacagggaaaagtacactattgaaccatttgtttggaacaaactttatggagatggatgcattcaagggaaggtatgatttcatctgatagtatttg  27450600                          --------------->AGL15                          <---------------AGL15                         <---------ANAC46                         <---------ANAC58                         <-----------------AGL1                          <---------ANAC58                         <---------ANAC58                                <---------ANAC58                     <-------GAMYB                                       <---------ANAC46         --------->LBD16 ================================================MADS_MADS        <---------ANAC55(1)       <------ZmHOX2a(1)                --------->ARR14(2)        <---------ANAC58 <-----------------AGL2                    <---------ARR14(2)        <---------ANAC46 ----------------->AGL1                   <---------GLK1(1)        <---------ANAC58 <-----------------AG                  --------->DAG2           <---------RAP2.6(3)  <-----------GT1   <---------MYB46(3)                       ---------->DOF2            --------->LBD16 --------DOF2       --------->MYB52(2)                   <---------------AGL15         --------->ATERF1(2) ------ANAC58       <-----------RAV1(1)                  ----------->RAV1(1)           <---------ATERF1(2) ------ANAC58    ------------>MYB.PH3(2)                 --------------->AGL15        <---------LBD16 >ARR14(2)    ---------->DOF2   --------->MYB59         ----------------->AGL1      --------->ALFIN1 -ARR14(2) --------->REM1(2)--------->ATHB12            <-----------------AGL1   <---------ARR11(3) -   cttttaacttccgtgtaaaagtttgttgcctgattaggaactcgtctataggtctcagaccacaaaaggtatctggcttgcaagatgtgccggtatagag  27450700                                     <------NtERF2                             --------->DEAR3(1)                            --------->DEAR3(2)                                    --------->ALFIN1                            <------NtERF2              --------->ICU4         <---------ANAC46   <---                         <---------ABI4(2)        ----------->GT1       <---------AtMYB61  --------->YAB1 -------->AtLEC2         --------->ZAT18      <------ZmHOX2a(1)    <----------DOF2<-----------RAV1(1)   ccttgcacccttgtaatggatttagagggcaccgatggcagagagcgaggagaggtaatttttgtctcgctgttttggtttagtgtgtggcattgatcac  27450800  Previous    Next  AGI:  At1g72960.1    Description:  root hair defective 3 GTP-binding (RHD3) family protein. similar to root hair defective 3 GTP-binding (RHD3) family protein [Arabidopsis thaliana] (TAIR:AT5G45160.1); similar to RHD3 (ROOT HAIR DEFECTIVE 3) [Arabidopsis thaliana] (TAIR:AT3G13870.1); similar to RHD3 (ROOT HAIR DEFECTIVE 3) [Arabidopsis thaliana] (TAIR:AT3G13870.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN63206.1); similar to root hair defective 3 GTP-binding protein [Triticum aestivum] (GB:AAS67855.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47076.1); contains InterPro domain Root hair defective 3 GTP-binding (InterPro:IPR008803) Range:  from: 27450275    to: 27454523    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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