Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------YAB1                 <-----------GT1                --------->YAB1             --------->YAB1             <---------AHL20(2)             -------->ATHB1             --------->ATHB51             <--------HAHB4             -------->HAHB4             <---------ICU4            <---------ATHB51                                                                =========            --------->ICU4                                                                  =========            <---------YAB1                   <-----------GT1                                ------>ZmHOX2a(1)          <--------HAHB4              --------->ZAT6       ----------->GT1                <---------ANAC58          --------->YAB1             --------->ZAT14       <---------MYB46(3)             <---------ANAC58          <---------ICU4             <---------ZAT14    <------MYB83  -------->P       <----------DOF2         --------->AHL20(2)          --------->ZAT18    <---------MYB46(3)             ==============         --------->ICU4              <---------ZAT18<-----------RAV1(1)                ------>ZmHOX2a(1)       --------->YAB1            <---------------AtSPL8 <------MYB46(1)                ============== ---------YAB1 <---------YAB1    --------------->AtSPL8<---------AtMYB61           <---------ARR11(3)   acatgataagaataattattatcagttccatcgatattgtacactaaaaaccatatgttggtggtgaaaacttaccaagtttcaaaatcctttcctgcta  27424000                                                                                                    -                                                                                                    <                 <---------At4g35610                                                               --              ----------->ARR10                                                                    <-           <-----------HVH21                                                                       --       ------>ZmHOX2a(2)                                                                           --      <------ZmHOX2a(2)                                                                            --     <---------ARR14(2)                                                                            <-     --------->ARR14(2)                                                                            <- ============HOX2a_HOX2a                                                                           <- =============HOX2a_HOX2a                  --------->MYB59         <-----------HVH21               == =============HOX2a_HOX2a           <-----------------AGL1      <---------ANAC58          <---------At4g35610 ============HOX2a_HOX2a         ----------->HVH21              <---------ANAC58          --------->At4g35610   aactggcgatctgggtgagagcttctctccaagttgtgaccttgttaggcattttagagtcttggtacttgtcaaatgtgaaactcccagtctgatgtct  27424100          <------ZmHOX2a(2)        <------ZmHOX2a(1)                                                    <---------At4g35610 ------>MYC3                                                                 --------->GLK1(1) -------MYC3                                                                 <---------ZAT2        <- ------->TGA1a                                                               --------->ZAT2  ------>MYB83 --------TGA1a                                                          <---------LBD16      ------>MYB46(1) ------->ANAC55(2)                                            <-------TEIL--------->LBD16    -------- ------->O2                                      <----------DOF2       --------->AtLEC2    <---------MYB111(1) ------->ANAC46                           --------->YAB1     <------ZmHOX2a(2)             --------->MYB46(3) --------ANAC46                           --------->TOE2(3) --------->ARR11(3)         --------->MYB46(3) --------ANAC55(2)                  --------->TOE2(3)       <---------ARR11(3)        --------->ANAC46 --------O2                         <----------DOF2         <---------ARR14(2)        --------->ANAC58 ==============================================bZIP_DOF     --------->ARR14(2)        --------->ANAC58   cacgtgagaaggatcaactccatagaaaatggggacaactttaatcttattctttaggtgaagatccattaccatgcggagctcgtccaagcaccaacta  27424200                                                                                             <-------                                                                                     <---------ZAT2                                                                                     --------->ZAT2                                                                                     --------->At4g35610                                                                                   ------>NtERF2                                                                                  --------->DEAR3(1)                                                                                 --------->ATERF1(1)                                                        --------->At4g35610    --------->DEAR3(1)                                                        <---------At4g35610    <---------DEAR3(1)                                                        <---------ZAT2       <---------ATERF1(1)    - --------REM1(1)                               <---------AtLEC2   <---------LBD16<------NtERF2    <-- >P                    --------->YAB1        <---------YAB1  --------->GLK1(1)--------->ATERF1(1)<---   gatgaagcgtagttctccgatagaatcacaagagcatatgtagagttttgaatggctctgctgatttcttcggagatggagtcgccgagctcaagctttt  27424300                                                                                --------->ANAC46          ----------->GT1                                         --------->LBD16  --------->ARR14(2)          --------->ANAC46                                       <---------ANAC46  <---------ARR14(2)          --------->ANAC58                                       <---------ANAC58  <---------GLK1(2)          --------->ANAC58                                       <---------ANAC58--------->LBD16  <---------YAB1                                   ----------->HVH21      --------->At4g35610 ---DOF2 ------->TEIL                             <---------WOX13(1)      <---------At4g35610 -------->YAB1        <---------DAG2 <---------ANAC46           <---------LBD16 --------->LBD16 ---------GT1      ------->GAMYB     <---------ANAC58        <---------ANAC58  <---------LBD16     -- --------GT1   --------->MYB46(3)    <---------ANAC58        <---------ANAC58  --------->LBD16     --   tatcatctttgaacgtaacaactcccttatcgacaagttgtttgtgcaaatgactgacaatgttcttgcgggtgtcttctccccggaaactcaagaacac  27424400              <------ZmHOX2a(1)           --------->CCA1(2)          --------->ARR14(2)          <---------ARR14(2)                           ==============================HOX2a_HOX2a       <---------HSFB2a(2)                   --------------->AGL15       --------->HSFB2a(2)    --------->ANAC58         ===========================HOX2a_HOX2a  --------->SPL7              --------->ANAC58 <----------DOF2                           --------->YAB1 ------->TOE1(1)           <---------REM1(1)<-----------------AGL3            <------ZmHOX2a(1)   --- ------->TOE2(1)--------->At4g35610<---------MYB52(1)  <------ZmHOX2a(2)   <------ZmHOX2a(1)      <--   atcgtacttccagataggagatgaagaagatgaagccattagtctctctctttatggatcaactatttggccaagaaggaggatgaagaaatcatatcaa  27424500                                                                                           ------>NtERF2                                                --------->YAB1                            --------->DEAR3(1)                                            --------->LBD16                               --------->RAP2.6(2)                                       --------->WRKY12                                --------->ANAC46                                       --------->WRKY38(1)                             --------->ANAC58           --------->ARR11(3)        ------->MYC3  <---------ICU4                    <---------ALFIN1           <---------ARR11(3)        <-------MYC2  --------->ATHB12            <---------ALFIN1 ------>ARR11(3)   <------------CBF  ------->MYC2 --------->ICU4            --------->ARR11(3)    <-- -------ARR11(3)--------->YAB1       <-------MYC3 <---------YAB1         --------->YAB1--------->ANAC58   gttcttagtacaagataatcatattgtcacaaacttgcacgttgtccgtataatgatttcaaatccatggttcaataagaccctcccccaagccaccctg  27424600                           --------->WRKY38(1)                           --------->WRKY12                           --------->WRKY45                  ------------>CBF              <-------PIF5--------->DOF5.7(2)              ------->PIF5<---------MYB52(1)                      <------NtERF2     *TSS <---------CCA1(2)             --------->ANAC58         --------->ANAC58           <-----------TGA1  --------->ARR11(3)             --------->ANAC58         --------->ANAC58       --------->ANAC46      <---------ARR11(3)             --------->ANAC46  <----------DOF2           <-----------GT1      ------------>CBF             --------->bZIP60(2)  <---------HSFB2a(2)<---------ARR11(3)      --------->TOE2(3) -------REM1(1)  <-----------HVH21--------->HSFB2a(2)--------->ARR11(3)     --------->REM1(1)<-------   ttgtaacacagttgcacgtcgtcaattcgttgacttttggaagccaaactctctagatattacaaggcgtcattaactacatcaatatctcatttctttg  27424700                                                    <<<<<<<<<TBF1                                               <---------ANAC58           --------->DAG2                                          --------->YAB1                 ---------->DOF2                                          <---------ICU4        --------->At4g35610       --------->HSFB2a(2)                            --------->ZAT14    <---------ANAC58 <---------At4g35610       <---------HSFB2a(2)                 --------->YAB1          --------->ICU4        <-----------HVH21   --------->LBD16                <---------ATHB12         <---------YAB1      ------>ZmHOX2a(1)     ------>ZmHOX2a(1) ---DOF2      --------->WOX13(1)       --------->YAB1     ------>ZmHOX2a(1)  --------->ALFIN1       <   gtcaaaattcaggcatcaatcatctatctctccactatcgataatcatggcttcttcttcctcctcatcagagcataaagtgttcctgagttttagaaga  27424800                                                ---------->DOF2                                        <---------TOE1(2)                                   ---------                                       <---------MYB52(1)                                   ---------                                      <-------GAMYB                                        <---------                                     --------->MYB55(2)                                <------NtERF2              <----------DOF2        --------->MYB52(2)                               --------->LBD16           <---------ARR11(3)        <---------MYB46(3)                              <---------ANAC46       <---------MYB52(1)           --------->SPL7                               <-----------RAV1(2)   --------->MYB52(1) --------->At4g35610   <------ZmHOX2a(2)                   --------->At4g35610 --------->ZAT18      <---------At4g35610<---------MYB46(3)                     <---------ZAT2 ------ZmHOX2a(1) <-----------HVH21<---------MYB52(1)                           --------->ZAT2 ------   gaggacaccggtagaacttttgtcagccatctataccgttcgttggatcaaaaagaaattcgaacttacaaatttgaaaaccagcaggcgggagacggaa  27424900  Previous    Next  AGI:  At1g72860.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G17600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16282.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3 (InterPro:IPR011713) Range:  from: 27419889    to: 27424439    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g72870.1    Description:  disease resistance protein (TIR-NBS class), putative. similar to disease resistance protein (TIR-NBS class), putative [Arabidopsis thaliana] (TAIR:AT1G72850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49902.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain von Willebrand factor, type A (InterPro:IPR002035); contains InterPro domain NB-ARC; (InterPro:IPR002182) Range:  from: 27424684    to: 27426845    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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