Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->AHL20(2)                                                    --------->TOE1(3)                                              --------->YAB1                                         <---------ARR11(3)                                         <---------ARR11(1)                                         --------->ARR14(2)                                         --------->ARR11(3)                         ----------->GT1 <---------ARR14(2)                 <----------DOF2         <-----------ARR10                <---------ANAC58        ------>MYB83<----------DOF2       <---------TOE1(2)----------->GT1 <---------ARR14(1) -------REM1(1) <---------ANAC58        <---------CCA1(2)                 ------>ZmHOX2a(2) -ANAC46  --------->ARR14(2)            ------>MYB46(1)            ---------->DOF2                  - -REM1(1) <---------ARR14(2)       <-----------GT1  --------->TOE2(3)  <------ZmHOX2a(1)           <-   ttgtagtccctggttctggctttggacaggtaaaatataaccaaatcttcataactttaaatgtcttacaaaaggatcgaacttgaataatgggttttgg  27240100                  --------->LBD16                  --------->HSFB2a(2)                  <---------HSFB2a(2)                  ------>ZmHOX2a(1)                 <---------ANAC46              <---------ARR14(2)                                                                 ----              --------->ARR14(2)                                                                 <---           --------->MYB59                                                            ----------->HVH21           <---------TOE1(3)                                     --------->GLK1(2)  --------->At4g35610     <---------TOE2(3)                                   <----------ID1         --------->ARR14(2) -------->ATHB12 <---------LBD16      <-------TEIL<---------HSFB2a(2)           <---------ARR14(2) ------TEIL<---------TOE2(3)   <----------DOF2    --------->HSFB2a(2)      ----------->GT1   --------   attcattgtggtttaggttcctggaacatggcactttagatgcacaatacttccacaagaagacaagattccagcgatagtgaatcgtctgacagagttc  27240200                                 <------ZmHOX2a(1)                             ---------->DOF2                          <---------MYB52(2)                      --------->LBD16                     --------->ANAC58                     <---------HSFB2a(2)                     --------->HSFB2a(2)                     --------->ANAC46       <-------TEIL <---------LBD16      <----------DOF2--------->ANAC55(2)   <---------ARR11(3)<---------ANAC55(2)                                  --------->DAG2   --------->ARR11(3)--------->ANAC58                          <---------DAG2                    ---- ----->HSFB2a(2)  <---------ARR14(2) ----------->HVH21         <---------------AGL15             <--- ------HSFB2a(2)  --------->ARR14(2)<---------MYB59 ------->TEIL<----------DOF2                 ----- ->GLK1(1)       <---------GLK1(1) --------->At4g35610  ---------->DOF2  ---------->DOF2       <-----   cacaagagcttcatggacgagttccgcaactaaaaggacctgaccatgaagatgaacttaaagacccttttgaagaaaagtgtgatcagtttgagttatt  27240300                                                                   <---------------AtSPL3                                                                   --------------->AtSPL8           -                                                                   <---------------AtSPL8           <                                                    --------->AHL20(2)                              -                                                    <---------AHL20(2)                              <                                             --------->At4g35610--------->AHL20(1)                  -  ---------->DOF2                            <---------At4g35610<---------AHL20(1)           -------- ----->AHL20(2)                        <---------YAB1           --------->ARR11(3)       <-----------HVH21 ------AHL20(2)                      --------->YAB1<---------AHL20(2)                   --------->bZIP60(2) ---->AHL20(2)                 --------->ANAC58    --------->AHL20(2)                 <---------ANAC58 ----YAB1                      --------->ANAC58    <---------AHL20(1)                 <---------ANAC58   aaaaaaaagaaaacttgtgttttgaatttgatcaggcaattgtgatcagctaatttaattttagaatattttgtacttccattccatggcatgtcatatg  27240400                                                                                               ------           ----------->GT1    <---------YAB1                                          --------->LBD16 --------->CCA1(2) --------->ATHB12                                                  --------->HSFB2a(2) -------->ARR14(2) <---------AHL20(2)                                         --------->ARR11(3) ---------ARR14(2)--------->AHL20(2)             <---------AHL20(2)           <---------ARR11(3) -------->ARR11(3)--------->AHL20(1)            <---------YAB1               --------->YAB1--------->DAG2 ---------ARR11(3)<---------AHL20(1)         <---------AHL20(2)             <---------YAB1---------->DOF2 -------->ARR11(1)<---------AHL20(2)         --------->AHL20(2)  --------->AHL20(2)  <---------HSFB2a(2) ->At4g35610  <---------AHL20(2)             <---------YAB1      <---------AHL20(2) <---------LBD16   aagatatgaaaattagtaaatttattgggcttataaatgggccttatattattaatgggccttatatttatttttcatatgatatttctggagaaagcga  27240500                                                                                    <---------HSFB2a(2)                                                                                    --------->HSFB2a(2)          ------------>CBF                                                <---------MYB52(1)      <---------ARR11(3)                                                --------->DEAR3(1)      --------->ARR11(3)                --------->ANAC58              <---------At5g28300    <---------AHL20(2)                  --------->ANAC58            <------ZmHOX2a(2)              <- --------->AHL20(1)                  *TSS        --------->AHL20(2)--------->ARR11(3)              -- <---------ARR11(3)             --------->HSFB2a(1)                <---------ARR11(3)       --------- ----->RAV1(1)   <-----------GT1<---------HSFB2a(1)        --------->ALFIN1     --------->KAN4(2) ---   cagtatattatcttcaatttttccattttgaagaattttctcaagaaaaaaaaaaatcaatgtggagaagatcaccgtcgtttattctcgacgagcgacg  27240600                                                                                     ------>NtERF2                                                                                     <------NtERF2                                                                                    <---------ORA47(2)                        --------->CCA1(2)                                           <---------ATERF1(1)                      <------NtERF2                                                 --------->DEAR3(1)                     <---------MYB46(3)                                    ------>MYB83------>NtERF2                    <---------ANAC58                                       ------>MYB46(1)        <-----------GT1<---------ARR14(2)                                <---------MYB59  -----------     --------->ARR14(2)--------->ARR14(2)                                <---------MYB46(2)--------->MYB52(1) --------ZAT2       <---------ANAC58                                  <-----------GT1--------->RAP2.3(1) ------->ZAT2       <---------ANAC46   ------>ZmHOX2a(1)        --------->LBD16   <---------LBD16 -->HVH21          <-----------------------TaNAC69(2)           <---------At4g35610<---------DEAR3(1) ---->TEIL         <---------LBD16     <----------DOF2      --------->ARR14(2)  <---------LBD16   aagctcgaattcacctccaatggcggatacaacacgaggtccttttcaaaaccctgattccatctccgcttattaccaaactcgcgcggcgcatcacggt  27240700                                            <---------ANAC46                                            --------->DEAR3(1)                                            <---------ANAC58                                            <---------DEAR3(1)                                            <---------ANAC58                                           --------->RAP2.3(1)                                           <------NtERF2                                           --------->ATERF1(1)                                           --------->DEAR4(2)                                          <---------ERF1                                          <---------RAP2.3(1)                                          <---------RAP2.6(1)                                          <---------RRTF1(1)                                          ------>NtERF2                                          <---------ORA47(2)                                          <---------ATERF1(1)                                         <---------DREB2C(2)                                         <---------ATERF1(2)                                         --------->ATERF1(2)                                         <---------RRTF1(3)                                         <---------RRTF1(2)                                         <---------RAP2.6(2)                                         <---------DEAR3(1)                                         <---------RAP2.3(2)                                         <---------RAP2.3(3)                                        --------->ATERF1(1)                                        <------NtERF2                                       <---------ATERF1(1)                                      --------->WRKY12                                      <---------DEAR3(1)                                     <---------MYB52(1)                                    <-------GAMYB                                      <---------HSFB2a(2)                                   <---------MYB46(3)                                  --------->HSFB2a(2)                                  <------NtERF2                                       <---------LBD16                                 ------>NtERF2                                       <---------LBD16                                --------->DEAR3(1)                                  ------>ZmHOX2a(2)                                --------->RAP2.3(2)                               --------->ARR11(3)               <---------ANAC58 --------->RAP2.6(2)      ------>NtERF2     --------->LBD16               <---------ANAC58 --------->RAP2.3(3)    --------->ATERF1(1)<---------ANAC55(2)              --------->STY1(2)--------->DEAR3(2)<-----------RAV1(2)      --------->ANAC46      --------->ANAC58       --------->ANAC58 <------NtERF2    <---------ICU4--------->ARR14(2)      --------->ANAC58       --------->ANAC46------>NtERF2    --------->ZAT2 <---------ARR14(2)      --------->ANAC46       --------->ANAC58<-----------HVH21<---------ZAT2 --------->MYB52(1) >HVH21       <---------STY1(2)--------->RAP2.3(1)    <---------ATERF1(1) --------->ANAC55(2)       -   gtcattacaagcgactggctagcccaagctcaagccgccgttggcggcgtctcaggcgatgcccagcatgacttatccgtaactgatctcgggaacgaga  27240800                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             --------->ARR14(2)                                             <-----------ARR10                                             <---------ARR11(3)                                             --------->GLK1(2)                                             <---------ARR14(2)                                 <----                                             <---------AGP1        <----------DOF2              <----                                            <---------CCA1(2)    <------NtERF2               --------                                            <---------ARR14(1) <------NtERF2                <--------                                           --------->LBD16     <---------RAP2.6(2)     <---------MYB52(1)                                          ------->GAMYB       <---------LBD16         <-------GAMYB                                         <---------LBD16    <------NtERF2          <---------At4g35610                                        -------->P          --------->ATERF1(1)    --------->At4g35610                                        --------->MYB52(1) <-----------HVH21       <---------ZAT2         <---------AHL20(2)           --------->MYB46(3)   <---------RAP2.6(3)   <---------RAP2.6(2)      <---------TOE2(3)       ----------->GT1--------->ARR11(3)<---------ANAC46 <---------At4g35610 ---------->GT1         XXXXXXXXXXXXXXXXXXX>MIR773B*      --------->DEAR3(1)<----------DOF2 <--------   agtcgtttaatgtaattgaagagttcaataactggagaaaacaaccggatctggctgaagccgtcgcggctatacgagctttggctgctgttattcgtgc  27240900 -----ANAC58                                    <---------YAB1 -----ANAC58                                  <---------At4g35610               <----------DOF2 ->TOE1(2)     --------->ATHB12        ---------->DOF2 --------->ANAC46         <---------DAG2 -ANAC58      <---------YAB1     --------->At4g35610   --------->ANAC58      <-----------GT1 -ANAC58      --------->ICU4     <---------At4g35610   --------->ANAC58    <-----------GT1   gagcgaagcgagcaccatgatggagcttgaaattgagctcaaaaaggcttctgatacactcaaggtgagaattcatttttcactttctgttcattcttcg  27241000  Previous    Next  AGI:  At1g72330.1    Description:  ALAAT2 (ALANINE AMINOTRANSFERASE 2); alanine transaminase. similar to ALAAT1 (ALANINE AMINOTRANSFERAS), alanine transaminase [Arabidopsis thaliana] (TAIR:AT1G17290.1); similar to alanine aminotransferase [Capsicum annuum] (GB:AAR05449.1); similar to alanine aminotransferase 1 [Glycine max] (GB:ABW17196.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45546.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdoma Range:  from: 27237147    to: 27240450    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g72340.1    Description:  eukaryotic translation initiation factor 2B family protein / eIF-2B family protein. similar to GTP binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT1G53880.1); similar to GTP binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT1G53900.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62132.1); contains InterPro domain Initiation factor 2B related; (InterPro:IPR000649) Range:  from: 27240537    to: 27242274    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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