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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                 --------->ANAC46
                                                              <-----------GT1
                                                           --------->YAB1
                                                  --------->ANAC58
                                                  --------->ANAC46
                     -------->ATHB1<---------MYB59--------->ANAC58--------->LBD16
                     <---------ICU4--------->TOE2(3)       <---------ICU4
                     --------->ATHB12        --------->ARR14(2) <---------LBD16
   --------->ANAC46  --------->ATHB51        <---------ARR14(2)<---------At5g28300
   --------->ANAC58 <---------ATHB51<---------------AGL15 <---------YAB1
   --------->ANAC58 --------->ICU4 <---------------AGL15  --------->ICU4
-------HVH21        <---------AHL20(2)      <------ZmHOX2a(1)<---------YAB1
--->ANAC46          --------->AHL20(2)---------->DOF2  --------->ICU4
--ANAC55(2)   --------->ANAC58     --------------->AGL15<---------ICU4                        <-----
->ANAC55(2)   --------->ANAC58    <---------ANAC55(2) --------------------->WRI1        --------->CCA1(2)
 
ttacacacgcacaatagaagcaaattattgtttgaatacctaaaagaggatagacgacataattatcaccgcaaacactctaaattttgggatatagctt  27183100
                                          --------->AHL20(2)
                                      <---------AHL20(1)
                                      --------->AHL20(1)
                                   --------->AHL20(2)
                             ----------->GT1
                            --------->ANAC58            <---------ANAC46
                            --------->ANAC46            ----------->GT1
                            --------->ANAC58   <-------TEIL                          <---------ICU4
                         --------->ARR14(2)--------->AHL20(2) --------->DAG2        <---------YAB1
-----DOF2                <---------ARR14(2)<---------AHL20(2)---------->DOF2   ----------->GT1
 
tcattagattacattttgactcacatggtatacggcaaaaaaatattaaattcatggcaacgtataaagttgatatttcaacatgttataatttctctct  27183200
                                                                                        <-------PIF5
                                                                                        <-------MYC3
                                                                                        ------->PIF4
                                                                                        ------->PIF5
                                                                                        ------->MYC3
                                                                                        <-------MYC4
                                                                                        ------->MYC2
                                                                                        <-------PIF4
                                                                                        <-------MYC2
                                                                                        ------->MYC4
                                                                                       <---------ANAC55(2)
                                                                                       <---------ANAC46
                                                                                       --------->O2
                                                                                       <---------O2
                                                         ========================================bZIP_DOF
                                                         <----------DOF2               --------->TGA1a
                                                    =============================================bZIP_DOF
                                                    <----------DOF2                    <---------ANAC58
                                                 <-----------ARR10          <---------ETT(2)       -
            <-----------GT1                      --------->GLK1(2)          --------->ETT(2)       -
         ----------->GT1                         <---------ARR11(3) --------->ZAT18    <---------ANAC58
         <---------ZAT6    ---------->DOF2      <---------GLK1(2)   --------->ETT(2)   <---------TGA1a
     <---------YAB1   ------->TEIL           --------->ANAC46    <---------ANAC46     ------------>OsbHLH66
 
cttcgaacatgagtgtaacaagacgaaccccaaagcctgcaaaaacacacagaatcttttctttggttttgtggaccggtctacaatctcacgtgcaaaa  27183300
                                                                             ----------->GT1
                                                                             <---------ZAT6
                                                                           <------------CBF
                                                                     <---------HSFC1(2)
          <------ZmHOX2a(2)             --------->ZAT14              --------->HSFC1(2)
         --------->ARR11(3)      <---------DAG2                      --------->HSFB2a(1)
         <---------ARR11(3)--------->ZAT6                       <---------LBD16
    <-------TEIL         --------->ARR11(3)       <------MYB46(1)    <---------HSFB2a(1)      <-----
<---------ATHB12         <---------ARR11(3)       <---------MYB46(3)--------->ARR14(2)   <---------DAG2
----->MYB46(1)          <---------CCA1(2)         <------MYB83  --------------->AtSPL8   <----------DOF2
----->MYB83------>ZmHOX2a(2)     <----------DOF2<---------MYB52(1)  <---------ARR14(2) --------->At4g35610
 
ccaaacatacacgatctctctctctctatatctctactttttctgaactcagttggtttcgattttcttcggaccttctattgttaaatcagctttataa  27183400
                                                   *TSS<---------------AtSPL8
            ====================HOX2a_HOX2a    <---------DAG2
     <---------GLK1(2)                       ---------->ID1
    <---------HSFC1(2)                      <---------WRKY18(1)
    --------->HSFC1(2)                      <-----------GT1
   --------->ANAC58                  <----------DOF2   --------------->AtSPL8<<<<<<<<<TBF1
   --------->ANAC58      <------ZmHOX2a(2) ----------->HVH21           <----------DOF2
------GT1   ------>ZmHOX2a(1)  --------->AtMYB61<----------DOF2      ---------->ID1              <--
 
cctcacaagcttctcctctattccatagatcaaaccacaactttgtttgacctttttttgagtacttctcttgtcttttcttcttcaagtttacttagtt  27183500
                               <---------ANAC58
                               <---------ANAC46                                          ---------->ID1
                               <---------ANAC58                                <----------DOF2
                         <-----------GT1               <---------AHL20(2)     <---------DAG2
               <---------MYB52(1)              <-----------GT1             <-----------GT1
              <-------GAMYB <----------DOF2 <---------ICU4         <---------ANAC58  <---------ANAC58
--------->HSFB2a(2)  <---------AHL20(2)    --------->ICU4          <---------ANAC58  <---------ANAC58
--------DOF2 <-----------RAV1(1)        ----------->GT1--------->AHL20(2)<----------DOF2 ---------->ARF1
 
ctttgagaacaaatttctgttgattttttttctttcttgtagagggataattacaagtttaatttccctagagtgtctttaccttttgccttgtctccct  27183600
                                                                                                 <--
                                              ------>ZmHOX2a(1)                                  ===
                                   <----------DOF2                                           -------
            ---------->DOF2      ------>ZmHOX2a(1)<----------DOF2           --------->YAB1   <------
       --------->DAG2   <---------DAG2     <-----------GT1              <----------DOF2     --------
      ---------->DOF2   <----------DOF2   <-----------GT1              <---------DAG2 ----------->GT1
 
ctcgagacaaaaagagaaagagaaacactttctgtcctctttttttttcctctctttttctctctcgctggaaaccttttcatattcaagtgtaatttta  27183700
                                                           <---------MYB52(1)
                                                        <-------TEIL
                                                        --------------->AtSPL3
                                                        ================HOX2a_HOX2a
                                                        ------>ZmHOX2a(2)
                                                       <------ZmHOX2a(2)
                                                       --------->ARR14(1)
                                                       =================HOX2a_HOX2a
                                                      --------->ARR14(2)
                                                      <---------ARR14(2)                    <-------
                      --------->YAB1                  --------->AGP1                     <---------MYB52(1)
    --------->ANAC58  <---------ICU4                  --------->ARR11(3)               <---------ANAC58
    --------->ANAC58  -------->HAHB4                  <---------ARR11(3)         <---------ARR11(3)
    --------->ANAC46 --------->ICU4                 ----------->ARR10            <---------GLK1(2)
-------------AGL15   <---------ATHB51            --------->LBD16                 --------->ARR11(3)
===================================MADS_MADS    --------->ANAC58               ----------->ARR10
-->AHL20(2)      <-----------------AGL3         --------->ANAC58               --------->ICU4
---AHL20(2)      <-----------------AGL2         --------->ANAC46   --------->REM1(1)   <---------ANAC58
->YAB1     <-----------GT1                     <---------LBD16   ------>ZmHOX2a(1)  <-----------GT1
 
atatttcaagcaattttctagctaattatggccttggaggctgtagtttacccgcaagatccgttctcctacatctcttgcaaagattttccgttttacg  27183800
                                   --------->ARR11(3)
                                   <---------ARR14(2)                                         ------
                                   --------->ARR14(2)                                      <--------
                                   <---------ARR11(3)                                      -------->HAHB4
                                 --------->ANAC58                                          <--------HAHB4
                                 --------->ANAC58                                          <--------ATHB1
                           --------->CCA1(2)                                               ---------
                          --------->ARR11(3)                                               ---------
                          --------->AGP1                                                  <---------ATHB51
                          <---------ARR11(3)                                              --------->ICU4
                          --------->ARR14(2)                         --------->ANAC58     <---------YAB1
                          <---------ARR14(2)                   --------->ANAC58    <---------ANAC58
                     <------ZmHOX2a(2)                         --------->ANAC58    <---------ANAC46
                    --------->ARR11(3)               <---------TOE2(3) <------ZmHOX2a(1)--------->YAB1
    <----------DOF2 <---------ARR11(3)           --------->TOE2(3)   --------->ANAC58 <-------------
----GT1       >>>>>>>>>TBF1<------ZmHOX2a(2)  ----------->RAV1(1)<------ZmHOX2a(1) <---------ANAC58
 
acttatactttcaagaagaagaagatcaagatccacaagatactaagaacaacattaagctagggcaaggacaaggacatggttttgcgagtaataatta  27183900
                                                                                      --------->ETT(2)
                                                                                      <---------ETT(2)
                                                            --------->TGA1a           ----------->HVH21
                                                            <---------O2             <------NtERF2
                                                            --------->ANAC58  --------->At4g35610
                                                            --------->ANAC46  <---------At4g35610
                                                            --------->bZIP60(2)------>ZmHOX2a(2)
                                                            <---------TGA1a   <---------GLK1(1)
                                                            --------->O2     <---------ARR14(2)
                                                            --------->ANAC58 <---------ARR11(3)
                                                ------>ZmHOX2a(2)            --------->ARR14(2)
                              <---------ICU4    ==============================HOX2a_HOX2a
                              --------->YAB1   ===============================HOX2a_HOX2a
                             --------->ICU4    <------ZmHOX2a(2)             ------->TEIL
                             <---------YAB1    --------->GLK1(1)             <---------AGP1
                           --------->YAB1     --------->ARR14(3)             --------->ARR11(3)
 --------->At5g28300 --------->YAB1           --------->ARR11(3)       ===============HOX2a_HOX2a
------->GAMYB     --------->YAB1 --------->YAB1<---------GLK1(1)       ------>ZmHOX2a(1)  ------>NtERF2
--->YAB1 --------->LBD16  <---------YAB1      <---------ARR14(3)    ------>MYB83    ------>NtERF2
-ICU4--------->ARR14(2) <---------ICU4        --------->ARR14(2)    ------>MYB46(1)--------->ATERF1(2)
>ATHB51<---------LBD16 <---------YAB1         <---------ARR14(2)<---------ARR11(3) <---------ATERF1(2)
>YAB1<---------ARR14(2)--------->ICU4        <------ZmHOX2a(1)  --------->ARR11(3) --------->DEAR3(1)
-----ATHB9    <---------YAB1<---------AHL20(2)<---------ARR11(3)--------->ARR14(3) <---------ANAC46
 
caacggtagaaccggagattatagtgatgattataattacaacgaagaggatctccaatggccacgagaccttccttatggatctgccgtcgacaccgag  27184000
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AGI:  At1g72210.1   
Description:  basic helix-loop-helix (bHLH) family protein (bHLH096). similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G22490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61663.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598)
Range:  from: 27183452    to: 27186092    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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