Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                  ---------->TaMYB80                                                                                <------ZmHOX2a(1)                                                                              <---------TOE2(3)                             <-----------HVH21           --------->YAB1       <---------TOE1(3)  <--- -------->DOF2     <----------DOF2                 <----------DOF2      --------->ICU4   ------>NtERF2   ttaaagacatggccaatgggcctttcactcttgtcaaacccatttgagtcgggctttagtcataactcattttaaagattaaggaatatgaggccagttc  27064700                    <---------ANAC58           ------>ZmHOX2a(1)         --------->YAB1        <<<<<<<<<ARR2                   <---------ANAC58        <<<<<<<<<ARR1                   <---------ANAC55(2)        <<<<<<<<<ARR2            ----------------->AG                           --------->ZAT14        <<<<<<<<<ARR1   ---------->ID1  <---------ANAC58                 --------->YAB1   <-----------GT1  <---------ANAC58    --------->ANAC55(2)        --------->ARR11(3)              <-  ---------->ID1  <---------TOE1(3)     <---------ANAC55(1)        <---------ARR11(3)            ---- ---ARR11(3)      <---------TOE2(3)--------->WOX13(1)              --------->GLK1(2)             <--- -------DOF2<---------TOE1(2)   -------->P       ---------->DOF2  --------->RVE1(1)           -------   ttttgtcacaatcctagtttaagcttgtctcacttaccaattacgtctctcaaaagacaaattttaaaaaatctataatctctactctctaacatgtata  27064800                                                         --------->AHL20(2)                                                    ----------->GT1    --------->YAB1                              --------->ATHB12   <---------YAB1                            <---------ANAC58 --------AHL20(2)              --------->AHL20(2) <---------WOX13(1)                             <--- ----->AHL20(2)             <----------DOF2  <---------ANAC46                              <---------WOX13(1) ------AHL20(2)       --------->YAB1         <---------ANAC58                      <-----------HVH21 >TEIL        <---------MYB52(1)             ----------------->AGL1       --------->YAB1   <---------YAB1   tatatatgataaactcgttggctattacaacttttaaatcacaaatggcctgattggaaaaaaatgtatacataaatgataagtttgtcactgattaatg  27064900                                         <------MYB83                          <---------AHL20(2)                  <---------AtLEC2       <------MYB46(1)            --------->AHL20(2)          --------->MYB59            --------->ATHB12     <---------ANAC58                                                <---            <---------ICU4--------->AHL20(2)                                                    <----            --------->ATHB51     <---------ANAC58                                     --------->AHL20(2)            <---------AHL20(2)   <---------ANAC46                                     <---------AHL20(2)        <---------YAB1   --------->AHL20(2)                                       <---------AHL20(2)   <---------HSFB2a(1)   <---------AHL20(1)         ----------->GT1              --------->AHL20(2)   --------->HSFB2a(1)--------->YAB1  <---------MYB52(1)  <-----------GT1        <---------AHL20(2) - -------ID1--------->ICU4<---------AHL20(2)        <---------TOE2(3)          --------->YAB1    -----   cgagaaaattctaattatttgcattaataaaattagcgtagttaggttttaaaaaggtttatacaatacattatacatatttataaatttaaatgttttt  27065000                 --------->AHL20(2)             <---------AHL20(2)             --------->AHL20(2)            <---------AHL20(1)            --------->AHL20(1)            --------->AHL20(2)                                                                 <-----            <---------AHL20(2)                                                                -------        --------->AHL20(2)                                                                    -------        <---------AHL20(1)                                                                    <------        <---------AHL20(2)        --------->TOE1(3)                                   <----------DOF2       --------->AHL20(2)       --------->ARR11(3)                                 <-----------GT1  --------->AHL20(2)            <---------ARR11(3)       <---------AHL20(2)       <-----------GT1<---  <---------AHL20(2) --------->AHL20(2)                  <---------YAB1          <---------AHL20(2) ------AHL20(2)  <---------AHL20(1)                  ------>MYB46(1)     <---------ANAC58     <------ -----AHL20(2)   <---------AHL20(2)        ---------->DOF2               <---------ANAC58     ------- -------->AHL20(2)  <---------YAB1--------->TOE2(3)  ------>MYB83        <---------ANAC46     <------ ---->AHL20(2)   --------->AHL20(1)     --------->AHL20(2)           <---------AHL20(2)  --------->AHL20(2)   aaatttatattaaatttattttattatttagataaatcttaaataaaaagaaaccaaatattatttgttattttttcgtgaaatttatctttttaatata  27065100                                      <---------MYB52(2)                                     --------->At4g35610                                     <---------At4g35610                                   <---------ARR14(2)                                   --------->ARR14(2)                                  <------NtERF2                                 --------->LBD16                                --------->RAP2.3(2)                                <---------ANAC46                               <------NtERF2                               --------->ATERF1(1)                               <---------LBD16                               --------->RAP2.3(1)                              <---------RRTF1(1)                              <---------RAP2.3(1)                              <---------ATERF1(1)                              ------>NtERF2                              <---------ERF1                             <---------RAP2.3(2)                             --------->TCP16(1)                             <---------ANAC46                             --------->TCP20                             <---------PCF2                             <---------RAP2.3(3)                                             --------                             <---------DEAR3(1)                                              <-------                             <---------RRTF1(2)                                              --------                            <------NtERF2                                                    <-------        ----------->GT1     <---------ABI4(2)                                               <--------    <---------YAB1          --------->ATERF1(1)                                          ------>ZmHOX2a(1)  <---------AHL20(2)       <---------ATERF1(1)                                           ============ <---------AHL20(2)        <---------RAP2.3(1)   <-----------HVH21                       ============ ----AHL20(2)              <---------ERF1     --------->SPL7                   <----------DOF2 -->AHL20(1)              <---------RAP2.3(3)<---------STY1(1)                 <---------DAG2<------- -->ARR11(3)              <---------DEAR3(1) --------->STY1(1)               --------------->AGL15 ---ARR11(3)              --------->ALFIN1   <---------MYB52(1)              <---------------AGL15 ------AHL20(2)           <---------RRTF1(3)<---------SPL7                  <-----------------AGL3 ---AHL20(1)           --------->ALFIN1----------->HVH21                    <-----------------AGL2 -->AHL20(2)           <---------AtMYB61--------->MYB52(1)            <------------------------ANAC81 ---AHL20(2) ---------->DOF2--------->RAP2.3(1) *TSS        <-----------GT1 <-----------------AGL1   ttttttattttagtaaaaagaaggaatggtggcgccggaaactgaccgtagggtcagtctaattactctctcagcgtttctctttttggtcctcaaatct  27065200        --------->AGP1        <-----------ARR10        --------->ARR11(3)        <---------ARR11(3)        --------->ARR14(2)        <---------ARR14(3)        --------->ARR14(3)        <---------ARR14(2) ->ARR11(3)                                                  -------->P --ARR11(3)                                              --------->ANAC58 ->ARR14(2)              --------->ARR14(2)              --------->ANAC58             --------->ZAT2 ----ARR10------>ZmHOX2a(2)                              --------->ANAC46             --------->At4g35610 -CCA1(2)<------ZmHOX2a(2)<---------GLK1(1)           --------->WRKY18(1)             <---------ZAT2 ===============HOX2a_HOX2a------>ZmHOX2a(2)    <-----------GT1             ------>ZmHOX2a(1) <------ ================HOX2a_HOX2a          <---------CCA1(2)---------->DOF2 <---------GLK1(1)     -------- --ARR14(2)              <---------ARR11(3)  <---------CCA1(2)         --------->GLK1(1)  <------ZmHOX2a(1)   tcaccttcaagatcttcttcgtccctcgatctccgatttcaaatctcgtttctccgttcaagcaacctctctgaattcctagtctcacagcaggaattag  27065300                                                  --------->ANAC58                                                  --------->ANAC58                                               ----------->HVH21                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                                            --------->ARR14(2)                                       <---------ARR14(2)                                ----------->RAV1(2)                                          <-------                                <---------At4g35610                                          --------   <------NtERF2                --------->At4g35610        <---------TOE2(3)          <------ZmHOX2a(1) <---------DEAR3(1)      ------>ZmHOX2a(2)  <---------ARR14(2)    ----------->RAV1(2)<----------ID1 ---ICU4         <---------At4g35610   --------->ARR14(2)  <---------TOE1(3)        ----------->GT1 ->ICU4     <---------GLK1(1) --------->REM1(1)----------->TGA1<-------TEIL    --------->AHL20(2)   tactcggcgaagcgatttctgcttcgatctctacatctgaagttccgatctgacgaaatttagggttcgtctgggtcgaagttaaataggaaaaagattt  27065400                                                  <---------TOE2(3)                    --------->GLK1(2)           ---------->DOF2                   <---------ARR14(2)       <---------YAB1  <---------At4g35610                  <------NtERF2             --------------->AGL15                       <---------ANAC58     <---------ANAC58                       <---------------AGL15                       <---------ANAC58     <---------ANAC46                      <-----------------AGL3               <------MYB46(1)     <---------ANAC58     <---------ZAT6 --------->GLK1(2)<---------ANAC58      <------MYB83 --ARR11(3)     <---------ANAC46        <---------GLK1(2) <---------ANAC58     <---------AtMYB61 ->ARR11(3)    <---------LBD16        ----------->ARR10   <---------ANAC46     --------->MYB59   cgaattggcttgagaatggcggaatctagtggaagttggagagattcttataaaggaatgtcgtctgataacatcaagggtttggttttagcgttgtctt  27065500                                                             <---------ZAT6                                                         <---------ZAT14                            <                                                      <---------ANAC46                              <                                                   --------->TOE1(2)                                -                                                  --------->ZAT2                                   <-                                                  <---------ZAT2          <------MYB83<----------DOF2                     <-------TEIL                 <---------At4g35610     ----------->GT1 -----------                     <---------YAB1            ---------->DOF2            <------MYB46(1) --------->TOE2(3)       --------->ATHB12            ---------->DOF2--------->At4g35610   <-----------RAV1(2)<---------   ctagtttgttcattggtgctagtttcattgttaagaagaaagggcttaagaaagctgcgagtactggtactagggcaggtataaatctctttcctttaat  27065600  Previous    Next  AGI:  At1g71900.1    Description:  similar to permease-related [Arabidopsis thaliana] (TAIR:AT1G34470.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81783.1); contains InterPro domain Protein of unknown function DUF803 (InterPro:IPR008521) Range:  from: 27065148    to: 27068158    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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