Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ---------->DOF2                                  ------>ZmHOX2a(2)                        --------->ANAC58                   <---------MYB59 ===================HOX2a_HOX2a                        --------->ANAC46                 ------>MYB46(1) --------->ARR11(3)                        --------->ANAC58                 ------>MYB83    <---------AGP1                       <-------TEIL                    --------->DEAR3(1)<-----------ARR10                      --------->CCA1(2)               --------->MYB46(3) <---------ARR14(2)                      --------->ARR14(1)          --------->TOE1(1)      <---------ARR11(3)                     --------->ARR11(1)          =================================HOX2a_HOX2a                     <---------ARR14(2)          --------->HSFB2a(2)     --------->ARR14(2)                     --------->ARR14(2)     <---------At4g35610       ------>ZmHOX2a(1)                     <---------ARR11(3)     --------->At4g35610       --------->LBD16 --->TEIL <---------MYB52(2)     --------->ANAC58<---------HSFB2a(2) <---------LBD16        --------- -At4g35610        ----------->ARR10   --------->YAB1 --------->DEAR3(2)<---------CCA1(2)---------->DOF2 >At4g35610   --------->ZAT6     --------->ANAC58------>ZmHOX2a(1)  ----------->RAV1(2)------>ZmHOX2a(1)   aactccaagagaactaacaccaagatacgaaagagaagcactcgtaagctcctcgaaccgacttaacttatcctggatcttatcccctcctaaaagctga  26927600                  <---------ZAT2          <----------TaMYB80      --------->O2--------->ZAT2      <---------O2<---------At4g35610                              --------->ATHB51      <---------ANAC55(2)                                          <---------ICU4      --------->ANAC58                                            --------->ICU4      --------->ANAC58                 --------->At4g35610      --------->YAB1    <---------ALFIN1           <-------TEIL        ---------->DOF2<---------YAB1 >At4g35610       --------->At4g35610  <---------At4g35610     <-------TEIL   atcgaaacacgtctattcccagcagagagaacatacatttcatctaacaaaaacaaagaagaagattcattatttcaaattccaaaaactcactgaaact  26927700                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                  <--                                   --------->MYB52(2)                                           -----                                 <---------MYB52(1)                                            <-----                                 ------>ZmHOX2a(1)             ---------->DOF2                 ------                    --------->ARR14(3)                    --------->At4g35610                <-------                    --------->ARR11(3)                    <---------At4g35610         --------->LBD16                    <---------ARR14(3)              <-----------ARR10              <---------At5g28300             <----------DOF2    --------->TOE2(3)   ------->TEIL        --------->ANAC58     --------    <-----------GT1 <---------ARR11(3)             <---------CCA1(2)    --------->ANAC58------>NtERF2   aaaatataacattctctttcaagaccttcttcgtccttagttgaaattgttctgtatctaagctccaaagcttgaagcaatgtgataccgcgactaagat  26927800                      --------->At4g35610         --------->MYB46(3)     --------->MYB46(3)                                        --------->ARR14(2)     <---------MYB52(2)                                        <---------ARR14(2) -------->LBD16       <---------At4g35610                   --------->ANAC55(2) --------HSFB2a(2)    <---------ZAT2               --------->ANAC58 ------->HSFB2a(2)    --------->ZAT2     <---------TOE2(3)  --------->ANAC46 -------LBD16    --------->At4g35610    <---------DOF5.7(2)<---------LBD16                         <- ---->GLK1(2)    <---------At4g35610    ---------->DOF2   --------->MYB52(1)                      --- ----GLK1(2)     <---------ZAT2       <---------MYB52(1) --------->WRKY12           --------->DEAR3(1) --->ARR11(3)    --------->ZAT2       --------->DOF5.7(2)----------->HVH21       <---------ALFIN1 <-- --TOE2(3)      ------->TEIL         <-------GAMYB --------->ANAC46    <---------YAB1           ----- --->ARR10   <---------ATHB12   --------->MYB46(3) --------->ANAC58 <---------MYB52(1)       ------>ZmHOX2a(2)   tctgggaacgaacaaatgaagctgagctctgagaacgaccgttaaagtagaaaacgccattgacggaaccgttatgttttccatcaccgtcttgatccca  26927900                                                             <---------O2                                                             --------->ANAC46                                                             ----------->HVH21                                                             <---------TGA1a                                                             --------->ANAC58                                                             --------->ANAC58                                                             --------->TGA1a                 <---------HSFB2a(2)                  --------->ABI4(2)                 --------->HSFB2a(2)                  <---------ZAT18        <------ZmHOX2a(2)                             --------->PCF2       --------->ARR14(2)     <---------ALFIN1        ------>NtERF2       <---------ARR14(2)  --------->ANAC46       --------->ANAC46   --------->ARR14(2)      --------     --------->DEAR3(1)<---------ARR14(2)        <---------LBD16     --------->GLK1(2)       <-------   ------->GAMYB <---------ANAC46                <---------At5g28300 <---------ARR14(2)      <-------  --------->ANAC46     --------->ARR14(2)       <-----------GT1  ------>NtERF2              ------>NtERF2  --------->DEAR3(1) ---------->TaMYB80     ------->TEIL     --------->O2                  --------->DEAR3(1) --------WRKY38(1)--------->LBD16        <---------ANAC46  --------->ANAC46        --------->ZAT18 ------>MYB46(3)<---------LBD16        ------>NtERF2  <---------ATERF1(1)          <---------ZAT18 -------ATHB12<---------ARR14(2)      ----------->HVH21    <---------ALFIN1        <---------ZAT14 ---->WOX13(1)--------->ARR14(2)      --------->DEAR3(1) <---------ALFIN1          --------->ZAT14   atcaacgccgatccaagttccggagtatccctccacatctccgacgtatttcacggtgcccacacgacgcgaatcgttgagagagtggactcgctgcccg  26928000                                                                                              <------NtERF2                                                                                             --------                                                                                             --------                                                                                            ---------                                                        --------->MYB46(3)                  ---------                                                      --------->MYB52(1)                    ---------                                                *TSS --------->MYB46(3)                    <---------LBD16                                            <---------ANAC55(1)                           ------>NtERF2                                            --------->ANAC55(2)                           --------->LBD16   ---------->DOF2                          <---------ANAC46                          --------->ARR14(2) <---------YAB1                             <---------ANAC55(2)                       <---------ARR14(2) --------->AGL1                             <---------ANAC58                         <---------GLK1(1) ----------AG  <---------ANAC58             <---------ANAC58              ---------->ID1 --------->ANAC46 ----------AGL1<---------ANAC58           <-----------GT1            ------->TEIL    --------->GLK1(1)   attatgaaagactcgttgctagactcagccttcatttttggaaattacgtctgaaacaaccgatgaaaacgaatttgtcgatttgagaaatccgccggaa  26928100                   <---------TOE2(3)              <---------At4g35610          <-----------TGA1          <-----------HVH21         <---------TGA2(1)         --------->TGA2(1)         --------->bZIP60(1)         <---------bZIP60(1)         --------->O2         <---------TGA1a         <---------O2--------->TOE2(3)      ----------->TGA1      ----------->HVH21    <---------At4g35610    --------->ZAT2--------->MYB52(1)    --------->At4g35610    <---------ZAT2<---------DOF5.7(2)  --------->TOE2(3) --->GT1 --------->TGA1a           <------NtERF2 ->LBD16----------->STF1        <---------PCF2                                                 ------ >RAP2.3(2)   --------->At4g35610 --------->RAP2.6(2)               ----------->GT1           <------ >LBD16<---------TGA2(2)      --------->ZAT18                     ---------->DOF2 --------->CCA1(2)-- >RAP2.6(2)--------->TGA2(2) --------->ALFIN1              --------->ANAC46<---------YAB1    <-------   aaatcaagctgacgtcagattaacgtcaagagtgggccgaaacttaatgggcttataaaaccctcaacaaaagtaaaattatagagatgggctaatttaa  26928200                                           <---------WRKY12                                           <---------WRKY38(1)                                           <---------WRKY45                                          --------->WRKY18(1)                                  <<<<<<<<<<<<<<<<<LFY                                  ----------->RAV1(1)                                  <---------RAP2.6(3)                                  ------>NtERF2                                 <---------ATERF1(2)                                 --------->ATERF1(2)                                 <---------ETT(1)                                                <---                                 ----------->HVH21                                               <---                                 --------->RAP2.3(3)   --------->DAG2                            ----                                 --------->ETT(2)   <---------------AGL15                        ----                                --------->DEAR3(2)  --------------->AGL15                     <------         ---------->DOF2        ----------------->AGL1---------->DOF2                    ---------->DOF2 ---->DOF2                  <---------ANAC58       <-----------------AGL3              --------->ANAC58 ---AHL20(2)                <---------ANAC58---------->DOF2                            --------->ANAC58 --------------->AGL1   --------->GLK1(2)<-----------HVH21                            --------->SPL7 --AHL20(2)            <---------GLK1(2)<---------MYB46(3)       <----------DOF2    <---------SPL7 --   agcccatatgagaaagaagtcaaacgattctcgtgccgacagtggtcaaaggaacttaaagtggcaacttttgttttggctatgttcggacgaaaggagt  26928300                                <----------DOF2                                                 -----                          <---------ICU4                                                        -----                       -------->HAHB4                                                           -----                       <--------HAHB4                                                  ----------->RAV1(2)                       <---------ICU4                                                  <---------At4g35610                       <--------ATHB1                                                  <---------ZAT2                       --------->ATHB51                                                ==============                       --------->YAB1                                                  --------->At4g35610 ------ZAT18          <---------YAB1                                                   --------->ZAT2 ------ZAT14          <---------ATHB51                                          <------ZmHOX2a(1) ----->ZAT14          --------->AHL20(2)                               --------------->AGL15   ------ ----->ZAT18          <---------ATHB12               <---------YAB1    ------>ZmHOX2a(1)      <------ ---ANAC46            --------->ICU4               --------->YAB1      ============================== ----->TEIL         --------->YAB1                <---------YAB1       <---------------AGL15---------   gtacttaagttttggattaaactaataattaagacttttttttttttttttgatgataatagacacttaagtcctcaaaataggaatccagctgcaacac  26928400  <---------ICU4            <------ZmHOX2a(1)                                <---------ARR11(3) <---------MYB52(1)       --------->MYB59                                   <---------CCA1(2) ---->ANAC46       --------------->AGL15                            --------->ANAC46 ---->ANAC58     ------>ZmHOX2a(1)                                  --------->ANAC58 ---->ANAC58 --------->ARR11(3)                                 --------->ANAC58 ===RAV      --------->ARR14(2)                --------->MYB46(3)  ------->TEIL ->GAMYB     <---------ARR14(2)    <---------ZAT2               --------->ANAC46                    < ---ALFIN1   <---------ARR11(3)    --------->ZAT2  --------->AtMYB61--------->ANAC58         -------- ==================================MADS_MADS <-----------GT1    --------->ANAC58  <----------DOF2  <- -->RAV1(1) --------->RVE1(1)      <---------At4g35610     --------->ARR14(2)--------->ARR11(3)<-----   accattagtacaaaaaatcctctctaattaggaatccagcttgcaattcaccaccaattcgaattcacgcacgcacacatatctctttctctcaatgttc  26928500  Previous    Next  AGI:  At1g71440.1    Description:  PFI (PFIFFERLING); protein binding. similar to hypothetical protein [Vitis vinifera] (GB:CAN61855.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938) Range:  from: 26924722    to: 26928048    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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