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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
--------->
YAB1
----------->
GT1
<---------
ANAC58
--------->
ZAT2
<---------
ANAC46
--------->
At4g35610
<---------
ANAC58
<---------
At4g35610
--------->
ARR11(3)
--------->
TGA1a
<-----------
ARR10
<---------
ZAT2
<---------
ARR11(3)
<---------
TOE2(2)
<---------
ARR14(2)
<---------
TOE1(2)
--------->
ARR14(2)
<-----------
RAV1(2)
----------->
GT1
<-------
TEIL
<-----------
RAV1(1)
--------->
ANAC58
<---------
TOE2(3)
--->
MYB52(1)
=================
RAV
--------->
ANAC58
<---------
TOE1(3)
>
YAB1
<-------
TEIL
<-----------
HVH21
--------->
AHL20(1)
<---------
CCA1(2)
<-----------
GT1
ctgtggaacaggtccatggactaatgtcgcag
gtgagtaataatattgaaacgaaatggtgacatatctcccttaaggttcgtgtatttcacagactcaa
26857800
<------
ZmHOX2a(2)
<---------
ARR14(2)
<---------
TOE1(2)
<-----------
HVH21
<---------
YAB1
<---------
O2
--------->
ATHB12
----------->
RAV1(1)
--------->
O2
--------->
YAB1
--------->
MYB46(3)
--------->
TGA1a
-------->
ATHB1
----------->
RAV1(1)
<---------
TGA1a
<
<---------
ICU4
---------->
DOF2
<-----------
TGA1
----------->
HVH21
<
<---------
YAB1
<--------
P
<-----------
HVH21
<---------
ALFIN1
------>
ZmHOX2a(2)
<---------
ATHB12
<------
MYB46(1)
<---------
ANAC58
--------->
ARR14(2)
--------->
ARR14(2)
--------->
WOX13(1)
<------
MYB83
-------->
ATHB1
<---------
ANAC58
<---------
ARR14(2)
<---------
DEAR3(2)
aatccatcattgttgtacttgtag
gtcataaaagatgaattattcaactcaatgcgtcagtccaacaacaaatctcccactgactcgtcggatccagacc
26857900
--------->
ATHB12
<---------
ICU4
<---------
ATHB12
--------->
MYB46(3)
---
<---------
WRKY18(1)
<---
--------->
WRKY38(1)
---------->
DOF2
<---------
TOE2(3)
----------->
HVH21
<---------
ANAC46
<---------
ANAC55(2)
<---------
WOX13(1)
<---------
AHL20(2)
<----
--------->
ANAC55(2)
--------------->
AGL15
--------->
AHL20(2)
-----
<---------
ICU4
<---------------
AGL15
------>
ZmHOX2a(1)
<---------
ANAC46
--------->
YAB1
<-----------------
AGL3
<-----------
RAV1(1)
<---------
MYB52(1)
--------->
ATHB12
<-----------------
AGL2
<---------
MYB46(3)
<-----------
RAV1(1)
---------
YAB1
<-----------------
AG
<--------
HAHB4
--------->
AHL20(2)
-----
---------
ATHB12
<----------
DOF2
<------------
CBF
<----------
DOF2
<-------
GAMYB
------
ctatgattacatattga
agttgctcttcttttggtttctagttttggattgacccatcatttgttgtcctttcatttattttctgttgtgtaaagaatta
26858000
---------->
DOF2
--------->
YAB1
<---------
ARR14(2)
--------->
YAB1
--------->
YAB1
<---------
GLK1(2)
<---------
KAN4(1)
------>
YAB1
--------->
ARR11(3)
--------->
KAN4(1)
------
YAB1
<---------
ARR14(3)
---------->
DOF2
-----
AHL20(2)
<---------
ARR11(3)
<-------
GAMYB
--------->
TOE2(3)
---->
AHL20(2)
--------->
ARR14(3)
<------
NtERF2
--------->
YAB1
---->
AHL20(1)
----------->
ARR10
<---------
DEAR3(1)
--------->
TOE1(3)
--->
YAB1
--------->
YAB1
<---------
TOE2(3)
<-------
TEIL
<---------
KAN4(2)
taatgctaatgagaataatacagaagaagattttggttaaagaaatgtttttaagccc
attcgattcgtcggggttaaaggaataatcttaagcccttaa
26858100
-----
------
------
<---------
ANAC58
<---------
ANAC58
--------->
GLK1(1)
--------->
WRKY38(1)
<---------
GLK1(1)
--------->
WRKY12
<---------
TOE2(3)
<----------
DOF2
<---------
ZAT18
<-----
--------->
ICU4
<---------
ARR11(3)
<---------
ZAT14
--------->
REM1(2)
<-----------
TBP
--------->
ARR11(3)
<----------
DOF2
<---------
O2
<-----
<------------
CBF
--------->
YAB1
------>
ZmHOX2a(2)
<---------
ALFIN1
--------->
ZAT14
--------->
LBD16
acaaaaattgtatttatggaaatcagaaacctagtgatcttttccaactctatcccctctctctttccttctctgcactcacgttgtccgtgaataggtg
26858200
--------->
RAP2.3(3)
------>
NtERF2
<---------
ATERF1(1)
--------->
DEAR3(1)
--------->
ATERF1(1)
<---------
ATERF1(1)
------>
NtERF2
------>
ZmHOX2a(1)
<---------
DEAR3(1)
<----------
DOF2
--------->
ALFIN1
--------->
DEAR3(1)
------>
GT1
--------->
YAB1
--------->
DAG2
<---------
ETT(2)
--->
ALFIN1
------------>
CBF
<-------
GAMYB
<---------
ANAC58
<-------------------
--------->
AtSPL8
<---------
ATHB12
<---------
MYB46(3)
<---------
ANAC58
------>
NtERF2
----------
AtSPL3
--------->
WOX13(1)
--------->
MYB52(2)
<---------
ANAC46
--------->
DEAR3(1)
----------
AtSPL8
------------>
CBF
<----------
DOF2
---------->
DOF2
--------->
ETT(2)
--------
gtactaaaacatggctaaca
atggcaatcatctttctctgtctttgtttgttgatgaaaagtgttccttatgggactgtcgacgacgacgcccacaagga
26858300
--
--------->
ANAC46
----
--------->
ANAC58
<---
--------->
ANAC58
<---
--------->
ANAC46
----
--------->
ZAT14
<---
<---------
ZAT14
<----
----------->
HVH21
------->
TEIL
---------
----------->
RAV1(2)
<---------
ZAT18
<---------
ANAC58
------>
MYB46(1)
--------->
ZAT18
<---------
ANAC46
--
WRI1
------>
MYB83
--------->
ANAC58
<---------
ANAC58
->
ANAC46
-------->
P
--------->
ANAC58
<---------
LBD16
gctatgtactgccaacctgaccatcttcaacaagcttatcaagaacgcacttcacacaacatggcaaacttatacacttgaagacgtagtattgcggaga
26858400
<---------
ANAC46
------>
MYB83
--------->
ZAT2
<---------
LBD16
--------->
HSFC1(2)
------>
MYB46(1)
<---------
HSFC1(2)
--------->
AtMYB61
<---------
ZAT2
<---------
LBD16
<---------
HSFB2a(1)
<---------
MYB46(2)
<---------
At4g35610
<---------
MYB59
---------->
DOF2
--------->
HSFB2a(1)
<---------
MYB111(1)
--------
------->
TOE2(3)
--------->
At4g35610
--------->
GLK1(1)
<-------
----->
GLK1(2)
<-----------
ARR10
--------->
LBD16
<--------
--------
ARR10
<---------
ARR14(2)
<---------
ARR14(2)
---------
------
ARR14(2)
--------->
ARR14(2)
--------->
ARR14(2)
--------->
ANAC58
----->
ARR14(2)
--------->
LBD16
<---------
ANAC46
<---------
MYB52(1)
<---------
SPL7
------
ARR11(3)
--------->
ANAC46
<---------
LBD16
--------->
TOE2(3)
<---------
MYB52(1)
--------->
ANAC58
-----
GLK1(2)
<---------
LBD16
<---------
GLK1(1)
--------->
TOE1(3)
<-------
GAMYB
--------->
LBD16
>
LBD16
--------->
TOE2(3)
<-------
TEIL
--------->
LBD16
<-----------
HVH21
<---------
LBD16
atcttagaaagccttagttatccggagcttcgtggaagtccggggataccaaaccttcaagaaaaca
gtcagttattgtctatagctccgcacggatatg
26858500
--------
--------
------>
ZmHOX2a(1)
<---------
ETT(1)
---------
->
GLK1(1)
<---------
ANAC58
<------------
--
GLK1(1)
<-------
MYC3
<---------
ANAC58
---------->
DOF2
-
ARR14(2)
<---------
ANAC46
<---------
MYB46(3)
----------->
HVH21
----------->
GT1
<--
>
ARR14(2)
<---------
REM1(1)
------->
MYC3
<----------
DOF2
--------->
ALFIN1
--------->
MYB52(1)
tttcctacaaatttgacatgtagcgagaaacatagcatatggctgtttctcgcgctgttcgtgcccgaccaaggggtttggaaactggttaaagaacggc
26858600
--------->
AHL20(2)
--------->
AHL20(2)
<---------
ANAC58
<---------
ANAC55(2)
<---------
TOE1(2)
<---------
AHL20(2)
->
ANAC58
<---------
ANAC58
----------->
GT1
->
ANAC58
--------------->
AtSPL8
--------->
At4g35610
--------->
DAG2
>
RAP2.6(3)
--------->
ANAC55(2)
------->
MYC3
--------->
TOE1(2)
<---------
At5g28300
---
AtSPL3
<-------
TEIL
<-------
MYC3
<---------
MYB46(3)
<---------
TOE2(3)
------
----
NtERF2
------->
TEIL
<-----------
GT1
<<<<<<<<<<<<<<<<<
LFY
<---------
At4g35610
---------->
DOF2
<
atcgaaggaactatgtacgtgataaatttataccacgttttgctatgaacaatggttcaacatgggagctatataggtttacag
tgaaaagtgactctgt
26858700
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AGI:
At1g71230.1
Description:
AJH2/CSN5/CSN5B (COP9-SIGNALOSOME 5B); protein binding. Identical to COP9 signalosome complex subunit 5a (CSN5A) [Arabidopsis Thaliana] (GB:Q9FVU9;GB:O82523); similar to AJH1/CSN5A/JAB1 (COP9 SIGNALOSOME 5A) [Arabidopsis thaliana] (TAIR:AT1G22920.1); similar to JAB [Lycopersicon esculentum] (GB:AAG43411.1); contains InterPro domain Mov34-1 (InterPro:IPR003639); contains InterPro domain Mov34/MPN/PAD-1 (InterPro:IPR000555)
Range:
from: 26856123
to: 26858058
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At1g71235.1
Description:
unknown protein
Range:
from: 26858221
to: 26858884
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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