Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------ANAC58                                                                                   --------->TGA1a                                                                                   <---------O2                                                                                   <---------ANAC55(1)                                                                                   ==================                                                                                   <---------bZIP60(2)                                                                                   ==================                                                                                   --------->ANAC55(2)                                                                                   <---------ANAC58                                                                                   <---------ANAC55(2)                                                                                ----------->TGA1                                            --------->MYB52(1)                  ----------->HVH21                                            ------>MYB83                 --------->LBD16                                          --------->AtMYB61          ------>MYB83  --------->O2     --------->ARR14(2)                   <---------MYB59            <---------ARR14(2)     ------->TEIL             --------->TOE2(3)<----------ID1        --------->MYB52(1)     <---------ARR14(2)     --------->ARR11(3)--------->MYB46(3)     --------->ARR14(2)  <---------ANAC55(2)       <---------ARR11(3)--------->DEAR3(2)     ------>MYB46(1) ----------->HVH21  --------->ANAC55(2)      <---------GLK1(2)------>MYB46(1)        <---------MYB59 <---------TGA1a -------->MYB52(1) --------->SPL7       >>>>>>>>>>MYB80         --------->MYB52(1) <---------ANAC46 ----->YAB1      <-----------HVH21  <---------ATHB12    ----------->GT1<---------LBD16<-----------HVH21   cataacgtatttgtaaactcgtccgtccaaaatctcaaatcaaaccaaaccgacaaaccagtaaaaaaaccgaaccggaaaactgacgtgtcagtgtctg  26855700                                                                            <---------HSFB2a(2)                                                                         <---------YAB1                                                                        --------->AHL20(1)           <---------ANAC58                                            <---------AHL20(2)           <---------ANAC55(1)                                         --------->AHL20(2)           <---------ANAC55(2)                                        <---------AHL20(1)           <---------ANAC58                                           --------->AHL20(2)           <---------ANAC46                                        <---------AHL20(2)           --------->ANAC55(2)                                     --------->AHL20(2)    --------->ANAC58                                               <---------AHL20(1)    --------->ANAC58                                               --------->AHL20(1)   --------->DAG2                                --------->DAG2   --------->AHL20(2)  ---------->DOF2 <----------DOF2               ---------->DOF2   <---------ATHB12     --------->ANAC58 ============bZIP_DOF            ----------->HVH21 --------->At4g35610<---------AHL20(2)  --------->GLK1(1) ============bZIP_DOF    ---------->DOF2 <---------YAB1       --------->AHL20(2)       --------->ANAC58   tataaaaagcaatacgtgttcttttagcaaagggtctgacactctgatagaaaagctgaagtaattcaataaattattttagaagagggaagaaatctac  26855800                                                                                  <---------AHL20(2)                                                                            --------->ATHB12                                                                           <---------ATHB12                                                                           <---------YAB1                                                                           --------->ICU4                               <---------AHL20(2)                         <---------TOE2(3)                      <---------AHL20(2)                                --------->AHL20(2)                     <---------YAB1                                     <---------AHL20(2)                   <---------AHL20(2)      --------->GLK1(1)        <---------AHL20(2)                  --------->AHL20(2)       <---------GLK1(1)   <---------MYB52(1)--------->AHL20(2)                  <---------AHL20(2)  ---------->DOF2        ----------->GT1<---------ICU4              <---------MYB52(1)<---------YAB1  ----------->RAV1(1) --------->AHL20(2)            ----------->GT1    --------->AHL20(2) --------->ZAT6   --------->AHL20(2)      --------->YAB1   ggttttacaaggggacgttatttattaatggattttaatagaaagaaatccaacactaatacactgttatttaattaatgattttaaattcaattttaaa  26855900                                                                             <---------AHL20(2)                                 <---------YAB1                              --------->AHL20(2)                                 --------->ICU4                           <---------ARR11(3)                               --------->YAB1                       --------->AHL20(2)                              <---------ATHB12                      <---------AHL20(2)                   --------->ARR11(3)      <---------ARR11(3)       --------->YAB1      --------->ATHB12  <XXXXXXXXXXXXXXXXXXXXMIR867              --------->WOX13(1)     <---------YAB1<---------ARR11(3)      --------->ARR11(3)   <---------AHL20(2)  ----------->GT1   <---------ZAT6 <---------CCA1(2)  <---------AHL20(2)  <---------ZAT6   --------->ARR11(3)   atttagtgttattggagtttatatctttgtaaatcatgtttaatagattttaaaattttgtgttattcaattaaaagattttaataccgtcaaaaaaaaa  26856000                                                                  <---------ICU4                             --------->AHL20(1)                <---------AHL20(2)                             --------->AHL20(2)               --------->AHL20(2)                             <---------AHL20(1)               <---------AHL20(2)                            --------->AHL20(2)            <------ZmHOX2a(1)<---------DAG2                        <---------AHL20(2)            --------->LBD16      <----------DOF2                       --------->AHL20(2)         --------->GLK1(2)<-----------GT1                ---              ---------->DOF2<---------AHL20(2)   <---------ARR14(2)    <---------ALFIN1        -----    <----------ID1<------ZmHOX2a(1)               --------->ARR14(2) <-----------GT1    ----------->TBP   aaaaaaaaaacaaactaaaaggattttaaattttatttctaaattagagaagaatccagaggaattaattttcaccacttttctcttcttatatataagt  26856100                                                                       --------->LBD16          <-----------GT1                                             <---------ANAC58     --------->LBD16                                                  <---------ANAC55(1)    --------->LBD16                                       --------->ANAC58    --------->ANAC46                                      --------->ANAC58                         <-   <---------HSFB2a(2)                                    --------->ANAC46                         --   --------->LBD16                                   <------ZmHOX2a(2)--------->ANAC55(2)       -----   --------->HSFB2a(2)                           <------ZmHOX2a(2)    <---------ANAC58        <------  <---------LBD16                       --------->ZAT2  <---------ALFIN1                      ------- ------>WOX13(1)                        --------->At4g35610           <---------ANAC46<---------GLK1(1) ------->CBF           *TSS             <---------At4g35610           <---------ANAC55(2) --------->HSFB2a(2)   caatccccgaagtaacatttttgacacagttttcaattcttcagcagacagatcgatcacactccatcgattccgtatgaaaccctagatttctgcaact  26856200                                  <---------DEAR3(1)                                  --------->DEAR3(1)                                 --------->ATERF1(1)                                 <---------------------WRI1                                 <------NtERF2    ------>ZmHOX2a(1)          <---------DEAR3(1)   <---------MYB59         <-------TEIL                                                   -----------  ----------------->AGL1<---------HSFB2a(1)                                               <---------At4g35610 --------GLK1(1)        --------->HSFC1(2)                                                --------->At4g35610 ------->GLK1(1)        <---------HSFC1(2)                                         <---------ZAT18 -->GAMYB               --------->HSFB2a(1)  --------->ANAC58                      <---------ZAT14 ---At4g35610         <---------ANAC46       --------->ANAC58                      --------->ZAT14 -->At4g35610---------->DOF2--------->MYB52(2)      --------->CCA1(2)          --------->ZAT6       -   gaattcctaattcgaaaaagaatggagggttcgtcgtcgacgatagcaaggaagacatgggaactagagaacagcattctaacagtagactcacctgatt  26856300                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                   --------->TOE2(3)-                                                                            ------>ZmHOX2a(1)     <--           --------->ARR11(3)                                               =========================     ------>NtERF2                                                        ------>ZmHOX2a(2)       ---    <---------ETT(1)                                                    --------->ARR11(3)        <--    ----------->HVH21                                                   <---------ARR11(3)        --- --------->TOE1(2)                                            --------->ALFIN1     <----------DOF2<-- --------->TOE2(2)                                       <---------ARR14(2) ========================= ------->GAMYB                  --------->ZAT14 --------->ANAC46      --------->KAN4(1)           --- >RAV1(2)  <---------ARR11(3)   <---------ZAT14--------->HSFB2a(2)    <---------KAN4(1)           <-- -------->MYB46(3)         <---------ARR14(2)  <---------HSFB2a(2)   <---------KAN4(2) <-----------GT1   caacctccgacaacatcttctactacgacgatacttcacagactaggttccagcaagagaaaccgtgggagaatgatcctcactactttaaacgagtcaa  26856400      <---------ZAT18    <---------At4g35610    --------->At4g35610  ---------->CDC5 -----ZmHOX2a(2) --------GLK1(1) -------AGP1 ----->ZmHOX2a(2) -------ARR14(2) ======HOX2a_HOX2a ------>ARR14(2) -------ARR14(3) ------>ARR11(3)                 --------->ANAC46 -------ARR11(3)                 --------->ANAC58                                                  -- =====HOX2a_HOX2a                --------->ANAC58          --------->ICU4                          -- ------>ARR14(3)           <---------MYB46(3)              <---------ATHB51                       <-- ---------ARR10        --------->ALFIN1       <---------MYB46(3)                        ----------->GT1   gatctcagcgctcgctcttcttaagatggtggttcacgctcgctctggtggtacaattgaaataatgggtcttatgcaaggtaagaccgatggtgatact  26856500                                 <---------HSFC1(2)                                 <------MYB46(1)                    <----------DOF2                    <---------DAG2                                                                  -                   <---------ANAC58                                    <---------YAB1               -       <---------YAB1            --------->HSFC1(2)                <---------ANAC58                 -       <---------TOE2(3)         --------->HSFB2a(1)               <---------ANAC58        <---------    <---------YAB1 <---------ANAC58                              <---------YAB1         <---------ARR14(2) ------>ATHB1 <----------DOF2    <---------HSFB2a(1)        <------ZmHOX2a(1)        <---------ANAC46 ------->YAB1<---------ANAC58    <------MYB83            <---------LBD16<---------------AtSPL8    --- -------YAB1 <---------ANAC58   <---------------AtSPL8   <-----------RAV1(2)<-------TEIL--------->ARR14(2)   atcattgttatggatgcttttgctttaccagtggaaggtactgagacaagggttaatgctcaggatgatgcttatgagtacatggttgagtattcacaga  26856600  Previous    Next  AGI:  At1g71230.1    Description:  AJH2/CSN5/CSN5B (COP9-SIGNALOSOME 5B); protein binding. Identical to COP9 signalosome complex subunit 5a (CSN5A) [Arabidopsis Thaliana] (GB:Q9FVU9;GB:O82523); similar to AJH1/CSN5A/JAB1 (COP9 SIGNALOSOME 5A) [Arabidopsis thaliana] (TAIR:AT1G22920.1); similar to JAB [Lycopersicon esculentum] (GB:AAG43411.1); contains InterPro domain Mov34-1 (InterPro:IPR003639); contains InterPro domain Mov34/MPN/PAD-1 (InterPro:IPR000555) Range:  from: 26856123    to: 26858058    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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