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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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     <----------DOF2                                                                         <------
   <---------At4g35610                                                                       -------
-------HSFC1(2)   <---------At4g35610                                           --------->ZAT14
------>HSFC1(2)   --------->At4g35610   <---------ANAC58                        <---------ZAT18
----->ANAC58     --------->MYB59        <---------ANAC46                        <---------At4g35610
----->ANAC58 <---------ZAT6             <---------ANAC58                    <---------------AtSPL8 -
 
agcttctgctttcttagagttagctctccaacttcattctgtagcttgggaatgtaagtgattacattatcgattatagatggtgcagaccatttcttct  26840600
                                                          <---------ICU4
                                                          --------->YAB1
                                                         <---------YAB1
                                              <---------MYB46(2)
                                              <---------MYB59
           --------->DAG2                     <---------MYB111(1)
          ---------->DOF2                    --------->ANAC55(2)
       --------->ANAC58                      --------->ANAC46
       --------->ANAC58                   --------->KAN4(2)
  --------->YAB1                    --------->YAB1       --------->ICU4
 <---------ATHB12                 --------->ANAC58     --------->YAB1                       >>>>>>>>
---At4g35610                      --------->ANAC58  ----------->GT1                      >>>>>>>>>TBF1
-->At4g35610----------->GT1     ---------->DOF2 ------>MYB83 --------->YAB1   --------->TOE2(3)
-------->WOX13(1)            --------->MYB46(3) ------>MYB46(1) ----------->GT1       >>>>>>>>>TBF1<
 
gccaatcagcaagaaaagttatatatagctcaacaacaagcagaacatacctaacttgtaataataacagtgaaaacaaaacctttgaagaagaagaaga  26840700
                                                                                              <-----
                                                                                              ------
                                                                                              ------
                                                                                           <--------
                                                         --------->ANAC46 --------->ARR11(3)--------
    <------ZmHOX2a(1)                               ------>ZmHOX2a(1)   <---------AtMYB61  ---------
 <-----------RAV1(2)                               --------->TOE2(3)<----------DOF2    <---------At4g35610
>TBF1                   <-----------------------TaNAC69(2)     ------>ZmHOX2a(1)       --------->At4g35610
-----------HVH21        --------->MYB59          ------>ZmHOX2a(1) <---------ZAT6   <----------DOF2
 
atggtcaggaagaagagtgccaagagtgaggtaagaggcatgaagtctcatcctccttaaacgctccttagcgttatggtcttgtttctttgctgcacca  26840800
----ALFIN1                                       <---------WOX13(1)         <----------DOF2
--->ZAT6         --------->ANAC58              --------->ATHB12     <---------ZAT14
--->AtMYB61      --------->ANAC58   <----------DOF2    <---------O2 --------->ZAT14
-ALFIN1          --------->AtLEC2   <---------DAG2     --------->O2 <---------At4g35610            <
--->RAV1(1)-------->P <---------ARR14(2)  <----------DOF2           --------->At4g35610            =
>REM1(1)   ------->TEIL        <----------DOF2<---------YAB1  ------>ZmHOX2a(1)                 <---
 
ctacttgagccatcaacctcatgcaaaactggttctttcctttttctttgtgattgacaagtgtccttctctgcagactctttctcaacgattgtttctg  26840900
           --------->ANAC58
           --------->ANAC58
           --------->ANAC46
     --------->CCA1(2)
     --------->GLK1(1)
     <---------GLK1(1)                               <-------GAMYB                   <------ZmHOX2a(1)
    --------->ARR14(2)   <---------ZAT14         --------->ARR14(1)           <------NtERF2
    <---------ARR14(2)<---------ANAC46          --------->ARR11(1)           ------>NtERF2         <
------ZmHOX2a(1)      ----------->GT1          --------->ATHB12            --------->RAP2.6(3)     <
=======================HOX2a_HOX2a            <---------YAB1             --------->ANAC46   --------
--------RAV1(2) <------ZmHOX2a(2)           <---------At4g35610    --------->AHL20(2)<----------ID1<
 
caggagggatatgcaagcgatcatggagtaaacttgatattgaagtctgatgattcggttgagaagacatatatatacgacggcaagaggaacaaaaaag  26841000
                <---------ALFIN1
              ------>MYB46(1)                                                                     <-
              ------>MYB83                                                                      ----
              -------->P                                                               <---------ICU4
             ------>ZmHOX2a(1)                                                         --------->YAB1
    <---------ZAT18  <---------MYB52(1)            <---------AHL20(2)                 <---------YAB1
---------ANAC46 --------->AtMYB61                  --------->AHL20(2)   <---------TOE2(3)  ---------
---------ANAC58--------->MYB46(3)                 --------->ICU4--------->TOE2(3)    <---------ARR11(3)
-->DOF2 <----------DOF2     ------>ZmHOX2a(1)     <---------ATHB12    <---------AHL20(2) <---------YAB1
---------ANAC58<---------MYB55(2)             ------------>CBF  --------->TOE1(3)    --------->ARR11(3)
 
aggcttgtgctctttcctaccaccgatggtcctaagttaaacttagaactgcaattaatgtctaaaaccctaattaagttaacaagatgatcatgacaat  26841100
                                      ----------->HVH21                                       <-----
                                  --------->MYB46(3)                                --------->At4g35610
                  --------->TOE1(3)   ----------->TGA1<-----------GT1               <---------At4g35610
         ---------->DOF2         -------->P  --------->At5g28300 <---------ICU4    ------->TEIL
<-----------TBP   --------->TOE2(3) ----------->RAV1(2)        <---------YAB1    ---------->DOF2   -
--------------AGL15            <---------WRKY38(1)<---------AHL20(1)        ------------>CBF  ------
----->YAB1 --------->DAG2      <---------WRKY12   --------->AHL20(1)   ------------>CBF--------->At4g35610
--->CBF<------ZmHOX2a(1)  ---------->DOF2   ----------->GT1    <---------TOE2(3)<---------ATHB12  <-
 
gatatatataggaaaaggtagccttagcctaaagtcaacccctgacgcagtaatatataacaaattaagaatggcacaatgcaatgaagctgcagaatta  26841200
                                                                          <---------YAB1
                                                                       <---------ARR11(3)          -
     <------------CBF                                                --------->ANAC58              -
   <---------TOE2(3)                                         ----------->HVH21                     <
   <---------YAB1                                           <-----------HVH21                  -----
  --------->AHL20(2)                                       --------->ANAC58                    <----
  --------->YAB1     <---------ANAC58                      --------->bZIP60(2)                 <----
----AHL20(2)   <---------AHL20(2)              <-----------RAV1(2)   --------->ANAC58          -----
-------->TOE2(3)     <---------ANAC58         <-------TEIL --------->ANAC46                   <-----
--->AHL20(2)   --------->AHL20(2)     ---------->DOF2      --------->ANAC58                   ------
--------ICU4----------->GT1   --------->AHL20(2) --------->LBD16     ----------->GT1          <-----
 
aacattaatattgaatattaaaatgcttgaagattaaaaaataaagaggttcagggaatcacaggtcacagcaagttattagaagagaaatggtcgtata  26841300
-------->ZAT14
-------->At4g35610
---------ZAT14
---->ARR14(2)
-----ARR11(3)
-----ARR14(2)
---->ARR11(3)                             --------->ANAC58
----GLK1(1)                 --------->ARR11(3)
--->GLK1(1)           --------->YAB1      --------->ANAC58
----CCA1(2) --------->GLK1(2)   ---------->DOF2      ----------->GT1                  <------ZmHOX2a(1)
 
tctgcagtacataagaatttgtaaatgataagacctagagcgagcgagccagagaagagcaaaaacagttttatttgttttagagaagaggaaaacttgt  26841400
                             <-------TEIL
                        <---------MYB59
                       --------->ANAC55(2)
                   <---------ANAC58
                   <---------ANAC58
                <----------DOF2
    --------->ARR14(2) ----------->RAV1(2)                             <--------P
    <---------ARR14(2)-------->P<---------At4g35610  <----------DOF2 <---------MYB46(3)
   <------ZmHOX2a(1) <-----------GT1 ------>ZmHOX2a(1)              <---------AtMYB61       <-------
 
gagacaggatttacagaggctttcttacctgattcatctcctccgatgttctacttctttgtaagaatgcagaggttgccatagttttttcttctaatgt  26841500
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AGI:  At1g71200.1   
Description:  basic helix-loop-helix (bHLH) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO24674.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598)
Range:  from: 26840203    to: 26840970    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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