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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------->
DOF2
------>
MYB83
------>
MYB46(1)
--------->
YAB1
--------->
MYB52(1)
<---------
WOX13(1)
<---------
MYB59
<-
--------->
ATHB12
<---------------
AGL15
<--
-------
TEIL
----------------->
AGL1
<--
---------
DOF2
<---------
HSFB2a(2)
<--
----->
At4g35610
<---------
HSFC1(1)
*
TSS
<------
-----
ARR11(3)
--------->
HSFC1(1)
--------->
ANAC58
<---------
ANAC46
---->
ARR11(3)
---------->
DOF2
--------->
HSFB2a(2)
--------->
ANAC58
<-----------
RAV1(1)
gcttcattgatgaaatgaaagctcgattccat
attctagaaaccaaactgggaaaagagagaagcaagat
gatcaagagttttgtttttgtggcatatgt
26833900
--
<---
--------->
DAG2
----
---------->
DOF2
<---
<---------
ZAT6
----------->
GT1
--------->
ANAC58
<---
------
GAMYB
----------->
GT1
<-------
GAMYB
--------->
ANAC58
<---
-------
MYB46(3)
<---------
TOE2(3)
--------->
MYB52(2)
======================================
----
MYB83
--------->
DAG2
<---------
MYB46(3)
----------->
HVH21
<---
----
MYB46(1)
---------->
DOF2
<-----------
RAV1(1)
<-------
MYC3
----
-----
RAV1(1)
--------->
YAB1
------------>
MYB.PH3(2)
------->
MYC3
----
tggttatagtgtttagcataaaggaagtgaaaaacgaagtttgttgcatcacaaggtaagcatgtgaaaggtgtccaaaacaaggatgaaattcaggtct
26834000
--------------->
AGL15
<---------
MYB52(1)
<---------
ANAC46
--------->
At4g35610
----------------->
AGL1
<---------
At4g35610
--------->
HVH21
<-------
GAMYB
------
O2
--------->
ATHB12
<---------
ANAC58
----->
O2
--------->
YAB1
<---------
ANAC55(1)
------
ANAC58
<---------
AtLEC2
<---------
ANAC58
------
ANAC58
--------->
GLK1(2)
<---------
ANAC46
------
ANAC55(2)
<---------
ANAC58
--------->
ANAC55(2)
======
bZIP_DOF
<---------
ANAC58
<---------
bZIP60(2)
------
TGA1a
<---------
ARR14(2)
<---------
ANAC55(2)
----->
TGA1a
--------->
ARR14(2)
<---------
ICU4
----------->
GT1
<-------
GAMYB
--------->
TOE2(3)
----->
ANAC55(2)
<---------
AtLEC2
------->
TEIL
<---------
MYB46(3)
<-----------
RAV1(1)
<------
cgtgacctatatgagaatttgcatgcatgatttcatgggaaatgaacattacgtgtctgttgagtaacttatggtctctgttgctaatctctacctctat
26834100
<---------
ANAC58
--------->
ANAC58
<---------
MYB46(3)
<---------
ANAC58
------>
MYB46(1)
<-----------
RAV1(1)
<---------
STY1(2)
<---------
YAB1
-------->
P
<---------
ZAT6
<----------
DOF2
--------->
STY1(2)
<----------
DOF2
------>
MYB83
<---------
GLK1(2)
--------->
YAB1
--------->
ARR11(3)
--------->
MYB46(3)
--------->
ICU4
--------->
ANAC58
<---------
ZAT14
<----------
DOF2
---
CCA1(2)
<---------
ANAC46
------->
TEIL
<---------
YAB1
<---------
ARR11(3)
ctcaccaactccatgtagtggaaagattgttgcatctttcaagcataatgctagcttgagagaagtgagaactttgactttgtaattggagacgaagacc
26834200
<---------
ZAT18
--------->
ZAT18
------------>
CBF
----------->
GT1
<------
MYB46(1)
--------->
AHL20(2)
<--------
P
<---------
AHL20(2)
<-------
GAMYB
--------->
AHL20(1)
<---------
MYB52(1)
<---------
AHL20(1)
<---------
DEAR3(2)
<-------
<---------
AHL20(2)
<------
MYB83
<-------
--------->
AHL20(2)
<------
MYB46(1)
------>
ZmHOX2a(2)
--------->
TOE2(3)
--------->
DAG2
<---------
ARR11(3)
<---------
MYB52(1)
----------->
GT1
---------->
DOF2
--------->
ARR11(3)
<---------
MYB46(3)
<---------
ARR11(3)
<----------
ID1
<------
MYB83
<------
ZmHOX2a(2)
<-----------
GT1
--------->
AHL20(1)
---------->
DOF2
--------->
SPL7
<----------
DOF2
<-------------
agattaatacaatatgttaataaaataaaataactaaaatcaaaaaaaagaaaaagtcggtagggcaatatcgtctttttccgatcgtggtcgtttctta
26834300
--------->
ANAC58
--------->
ANAC58
--------->
HSFC1(2)
--------->
HSFC1(1)
<---------
HSFC1(2)
<---------
HSFC1(1)
<---------
HSFB2a(1)
<---------
HSFB2a(2)
--------->
HSFB2a(1)
<---------
MYB46(3)
<---------
ARR14(2)
------>
ZmHOX2a(2)
--------->
MYB52(2)
*
TSS
--------->
GLK1(2)
--------->
MYB46(3)
<-------
--
ANAC58
<---------
TOE1(2)
--------->
ARR14(2)
--------->
LBD16
--------->
ARR14(2)
--
ANAC58
<---------
MYB52(1)
<---------
ARR14(2)
--------->
ANAC46
------>
MYB83
<---------
ARR14(2)
--------
WRI1
--------->
HSFB2a(2)
--------->
ARR14(2)
------>
MYB46(1)
--------->
ATHB12
caagtttcttcgttcgttctctagaaacgc
agaa
atggagactcagtatccgaaactaatcgaaccatccaagacccgaattggatggattgggatcggg
26834400
--------->
ANAC58
--------->
ANAC58
xxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<-----------
RAV1(2)
<------
NtERF2
--------->
ATERF1(1)
--------->
At4g35610
<---------
ATERF1(1)
--------
--------->
LBD16
------>
ZmHOX2a(2)
------>
NtERF2
--------->
GLK1(1)
<------
NtERF2
======================
HOX2a_HOX2a
<---------
At4g35610
<------
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ANAC46
=======================
HOX2a_HOX2a
<---------
DEAR3(1)
<---------
ARR11(3)
--------->
ARR14(2)
------>
ZmHOX2a(1)
--------->
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
AGP1
--------->
GLK1(1)
<---------
YAB1
--------->
ARR11(3)
<---------
MYB46(3)
--------->
DEAR3(1)
--------->
ARR14(2)
--------->
GLK1(2)
<------
ZmHOX2a(2)
<---------
CCA1(2)
<---------
At5g28300
<------
ZmHOX2a(1)
=============================
HOX2a_HOX2a
<---------
WRKY38(1)
------>
ZmHOX2a(2)
--------->
At4g35610
--
LBD16
<---------
AtMYB61
--------->
RAP2.3(1)
<---------
MYB52(1)
---------->
DOF2
--------
ataatgggatcagcgatggtttctcatatcctcgccgcaggctattcagtcaccgtttatgctcgcgatcttcgtaaaacaaaggatctgcaaaccaaag
26834500
--------->
DEAR3(2)
--------->
SPL7
<----------
DOF2
<---------
SPL7
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<-------
GAMYB
<---------
MYB52(1)
--------------->
AtSPL3
--------->
MYB52(2)
<-------
GAMYB
<---------------
AtSPL3
<---------
MYB52(1)
<---------
TOE2(3)
<---------
ANAC46
<---------------
AtSPL8
<---------
At4g35610
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
-->
DOF2
------>
NtERF2
--------->
At4g35610
<---------
MYB46(3)
--------->
ARR11(3)
->
MYB52(1)
---------->
DOF2
----------->
HVH21
<------
ZmHOX2a(2)
<---------
ARR11(3)
-
gaggtcgtaccgccaatagccccaaagagttaggggagatgagcgacgttgtgttcacgatcgttggaaactctaacgatgttagatcgttgcttcttgg
26834600
--------->
ARR14(2)
<-----------
HVH21
<---------
TGA1a
-------
<---------
ANAC58
<--------
<------
NtERF2
<--------
<---------
ANAC58
<------
NtERF2
--------->
TGA1a
--------->
ATERF1(1)
<---------
ANAC46
<---------
DEAR3(1)
------>
NtERF2
--------->
ANAC46
<---------
ANAC46
--------->
ATERF1(1)
<---------
ANAC58
<------
NtERF2
<---------
ANAC58
--------->
LBD16
--------->
ARR14(2)
<---------
LBD16
<---------
ARR14(2)
--------->
ANAC46
--------->
ZAT14
--------->
ZAT14
--------->
ATHB12
<---------
ARR14(2)
<---------
ZAT14
--------->
MYB52(1)
<------
ZmHOX2a(1)
--------->
CCA1(2)
<-
<---------
ZAT18
--------->
ALFIN1
--------->
ANAC58
--------->
CCA1(2)
<---
--------->
ZAT18
--------->
LBD16
--------->
ANAC46
<---------
ARR11(3)
----
-------->
ICU4
<---------
LBD16
<---------
ZAT18
--------->
ANAC58
--------->
ARR11(3)
<---
ggatgatggtgtactctctggtcttaaacccggtggagtaacagtggacatgactagtagcaagccaggattggcgcgtgagatatacgcggaggcgagg
26834700
<---------
ARR14(2)
--------->
GLK1(2)
<---------
ARR14(2)
<---------
At4g35610
--------->
HSFC1(2)
--------->
At4g35610
<------
NtERF2
--------->
ANAC58
<---------
DEAR3(1)
--------->
ANAC58
<---------
ANAC46
<---------
ANAC46
--------->
ATERF1(1)
----------->
HVH21
<------
NtERF2
--------->
ALFIN1
<---------
LBD16
------->
MYC2
<---------
RAP2.3(1)
<-----------
HVH21
<---------
ORA47(2)
------->
PIF5
--------->
LBD16
------->
TEIL
------->
PIF4
<---------
ERF1
--------->
ATERF1(1)
<-------
MYC4
------>
NtERF2
<---------
ARR14(2)
------->
MYC4
<---------
ATERF1(1)
--------->
ARR14(2)
<-------
MYC2
<---------
ATERF1(2)
<---------
MYB46(3)
<-------
PIF4
--------->
DEAR3(1)
--------->
ALFIN1
<-------
PIF5
<---------
DEAR3(1)
<------
NtERF2
<-------
MYC3
<---------
RAP2.3(2)
--------->
At5g28300
------->
MYC3
<---------
DOF5.7(2)
<----------
TaMYB80
<-------
GAMYB
--------->
O2
--------->
MYB52(1)
--------->
HSFB2a(1)
<---------
ORA47(2)
<---------
O2
<---------
MYB52(2)
--------->
LBD16
<---------
DEAR3(2)
<---------
TGA1a
<---------
TOE1(3)
<---------
HSFB2a(1)
<---------
ANAC46
--------->
ALFIN1
<---------
ANAC55(2)
--------->
ATERF1(2)
-->
ALFIN1
<---------
MYB46(3)
<---------
ANAC46
--------->
ANAC55(2)
--------->
ATERF1(1)
-
ANAC58
<---------
ANAC58
--------->
ARR14(2)
--------->
ANAC58
<---------
LBD16
<
-
ANAC58
<---------
ANAC58
----------->
RAV1(2)
--------->
ANAC58
<---------
ARR11(3)
<
-----
NtERF2
<---------
ABI4(1)
<---------
ARR14(2)
--------->
TGA1a
<---------
TOE2(3)
----------->
ARR10
<
------
DEAR3(1)
==============================================
MYC_MYB
--------->
ARR11(3)
<--
----->
ALFIN1
<---------
DEAR3(1)
<---------
ANAC46
<------------
OsbHLH66
--------->
ARR14(2)
-------
------
ANAC46
<---------
DREB2C(2)
<---------
MYB46(3)
------------>
OsbHLH66
<---------
ARR14(2)
--------->
LBD16
cggagggattgctgggcggtggatgcgcctgtatcgggtggagacgctggagcacgtgaggggaagctaacgatattcgccggcggagattccgagattg
26834800
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AGI:
At1g71160.1
Description:
beta-ketoacyl-CoA synthase family protein. Identical to 3-ketoacyl-CoA synthase 7 (KCS7) [Arabidopsis Thaliana] (GB:Q9C992); similar to very-long-chain fatty acid condensing enzyme, putative [Arabidopsis thaliana] (TAIR:AT1G25450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24701.1); contains InterPro domain Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392); contains InterPro domain Thiolase-like; (InterPro:IPR016039); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328); contains InterPro domain FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601); contains In
Range:
from: 26832363
to: 26833870
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g71170.1
Description:
6-phosphogluconate dehydrogenase NAD-binding domain-containing protein. similar to 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G71180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24698.1); contains InterPro domain 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Dehydrogenase, multihelical; (InterPro:IPR013328); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927); contains InterPro domain 6-phosphogluconate dehydrogenase, NAD
Range:
from: 26834331
to: 26835761
Orientation: Forward
Links:
TAIR
MIPS
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