Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                     <---------ARR14(2)                                     --------->ARR14(2)        <---------SPL7               <---------AGP1       <------MYB46(1) <----------DOF2                     <---------ARR11(3)   <------MYB83                          <---- -------AHL20(2)       ----------->GT1--------->At4g35610 <---------MYB46(3)                  ------- ---RVE1(1)        <---------AHL20(2)--------->GLK1(2)--------->ATHB12                   --------->ARR11(3) ---CCA1(1)      <---------YAB1      --------->ARR11(3) <---------WOX13(1)               <---------ARR11(3) ->ARR11(3)   --------->ICU4        <------ZmHOX2a(1)<---------YAB1        <---------YAB1<---------GLK1(2) --ARR11(3)<---------YAB1       ---------->DOF2--------->AHL20(2)        --------->ANAC55(2) <-------   tttcttttgacttacgattatgaaattgaaaaaaaaaaggatctgaagataaattttgattggttcacaaacttcacatgataaacaagaagatttttct  26827900                                 --------->ARR11(3)                                 <---------GLK1(2)                                 <---------ARR11(3)                       ---------->DOF2                     <---------------AGL15                     ================================================================================                    --------->TOE2(3)                    --------->TOE1(3)                    <---------------AGL15                    --------------->AGL15                   ----------------->AGL1                                                           -                   ----------------->AGL3                          ----------->GT1                  <                   ----------------->AGL2   --------->YAB1      --------->MYB52(1)                  - ------DOF2        ================================================================================== --->ID1<---------ARR11(3)     ----------->ARR10          <----------ID1                      <------ ----GT1--------->ARR11(3)   <------ZmHOX2a(1)        --------->AHL20(2)            <---------YAB1 --   tttttgaacaaatcttttgataccttaaagaggaagatttttgatatcaaaatgaataaaaaaacaaaacagagaaaattttgtttttgattcgttttga  26828000                                                                          ------->GAMYB                                                                         --------->MYB46(3)                                                               --------->AHL20(2)           ----------->GT1                                     <---------AHL20(1) <----------DOF2                                               --------->AHL20(1) <---------------AGL15                                         <---------AHL20(2) <---------DAG2>>>>>>>>>MYB98                             --------->AHL20(1) ================MADS_MADS                            <---------YAB1   <-----------GT1 -------->TOE2(3)                                   ----------->GT1   <-----------GT1 ---------------AGL15                         --------->YAB1  <---------AHL20(2) -------------->AGL15                    <---------ATHB12 <---------AHL20(2)              <---------AHL20(2) ===============MADS_MADS              --------->WOX13(1) <---------AHL20(1)              --------->AHL20(2) ---YAB1 <------ZmHOX2a(1)          ------->TEIL<---------YAB1--------->AHL20(2)   <---------WRKY18(1) --------------->AGL1       --------->YAB1  ------->TEIL  --------->AHL20(2)     <----------DOF2   tacctttatgaggaagtaacatacttatattcaaaatgaatcaatgaatcaacattgtaattaattaaatttttaacagaccgcttgactaattaaacaa  26828100                       --------->ATHB51         <---------AHL20(2)         <---------AHL20(1)        --------->YAB1 --------->ATHB12       <---------YAB1  <---------ICU4      <---------AHL20(2)      --------->AHL20(2)     --------->YAB1    -------->ATHB1           <---------ANAC58    <---------YAB1    <---------YAB1            <---------ANAC46 <---------TOE1(3)--------->ANAC58              <---------ANAC58                  --------->TOE2(3) <---------YAB1   --------->ANAC46              <---------AtLEC2              <----------DOF2 <---------TOE2(3)--------->ANAC58  <----------DOF2  ---------->DOF2    ---------->DOF2        ------   gttaagattataatatttcaacgcattattgtatagtactttggtgatttgcatgtaaagttttttttttttaacaaagacttttcttaatttgctataa  26828200                                    <------NtERF2                                    <-------GAMYB                                    <---------At4g35610                                    --------->At4g35610                                   <---------ERF1                                   <---------RAP2.3(1)                                   ------>NtERF2                                   <---------MYB46(3)                                  <---------ANAC58                                  <---------DREB2C(2)                                              --                                  <---------RRTF1(3)                                             ----                                  <---------ANAC58                                               ----                                  <---------RAP2.3(3)                                            ----                                  <---------DEAR3(1)          ------->TEIL                  ---------                                  <---------ATERF1(2)         --------->ARR14(2)            ---------                                  <---------RAP2.6(2)         <---------ARR14(2)            ---------                                  <---------RAP2.3(2)        <---------CCA1(2)            <----------                                  <---------RRTF1(2)      ------->TEIL                   <---------ARR14(2)        --------->AHL20(2)        --------->ATERF1(2)  --------->ANAC58      --------->ALFIN1    <---        --------->ATHB51          <---------ANAC46     --------->ANAC58      <---------ANAC46    ----       <---------MYB52(1)        --------->RAP2.6(3)<---------DEAR3(1)       <---------REM1(1) <-----       --------->ICU4       <---------AHL20(2)     --------->SPL7   ------->TEIL         --------->ARR14(2) --->YAB1                 --------->GLK1(2)       <------ZmHOX2a(1)<---------CCA1(2)------------>CBF-   tcaagtgccattatttagatcgagagagaatttatggcggctgaataagagaggacgacgcatgtatctgtatctcgaggtgtagaatcaatatacgaca  26828300      --------->AHL20(2) ------>NtERF2 ------->RAP2.3(1) ----->ANAC46 ----->O2 ----->ANAC58 >ANAC58 >ANAC58                   --------->AHL20(2) >ANAC46             <---------GLK1(1)    ---------->DOF2 -GT1----------->TBP --------->GLK1(1)   <---------AHL20(2)                                         < ------O2           --------->ARR11(3) *TSS          <--------P ---------->DOF2                     < ----->ANAC58 --------->ANAC46<---------AHL20(2)    <-------GAMYB         <---------TOE2(3)     <---- ----ALFIN1  --------->LBD16 --------->YAB1        ----------->GT1   ----------->GT1<---------WOX13(1) -------->RAP2.6(2) <---------ARR11(3) <-----------TBP----------->ARR10  ---------->DOF2  <----------ID1   cgccgctataaattccacagaagatatcatataatattagtatataaagtatagggttgattcggagaaagaggttaaagtattagattgaaacaacaaa  26828400                                        <---------ANAC58                                        <---------ANAC58                                <------NtERF2                               --------->LBD16                              <---------ANAC46                              <---------DEAR3(1)                             <---------LBD16                             <---------At4g35610        ----------->RAV1(1)                  --------         >>>>>>>>>TBF1     <---------DEAR3(1)          ----------->HVH21                    <--------  --------->LBD16       <---------ARR14(2)            --------->At4g35610    ---------->DOF2<-------- ---------LBD16         --------->ARR11(1)  <---------ANAC46               --------->ANAC58 <-------- -----------RAV1(2)     --------->ARR14(2)  <---------ANAC58               --------->ANAC58 <-------- -------ARR10           <---------GLK1(2)   <---------ANAC58       ----------->GT1         <---------LBD16   tctcaggggaagaagaagagagaatggattcggcggagaagggcttgcttgttgtgagcgacagagaagaagtaaacaagaaagatgggtttttgcggga  26828500                                                                                       <<<<<<<<<<WRKY43                                       <---------ZAT18                               <------MYB46(1)                                  --------->ZAT14                                   <---------MYB46(3)                                  <---------ZAT14                                   <---------AtMYB61                                <---------WOX13(1)                               <---------MYB46(3)                              <---------ICU4                                     --------->ATHB12                              --------->ATHB12                                   --------->MYB55(2)                             <---------ATHB12                                 --------->YAB1                           <---------At4g35610                                -------->HAHB4                          ------------>ATHB5                                  <---------ICU4                          <---------TOE2(1)                                  <---------YAB1                         --------->SPL7<---------ZAT14                       --------->ICU4                       <-----------HVH21                                   --------->YAB1                       --------->ARR14(2)                            --------->ARR11(3)<<<<<<<<<<WRKY38 ->LBD16               <---------ARR14(2)                            <---------ARR11(3)<<<<<<<<<<WRKY26 -LBD16               <---------DEAR3(2)                       <---------At4g35610 <--------P -ANAC58             --------->DEAR3(1)--------->ZAT14         --------->At4g35610<-------GAMYB -ANAC46      <-------TEIL<---------TOE1(1)                  <-----------RAV1(2)<---------YAB1 -ANAC58     <-----------GT1 <---------YAB1          ------->TEIL   --------->GLK1(1)<------MYB83  <-   aacgaagaaacttagttacatcgccggtccgatgattgcagtgaactcgtctatgtatgttcttcaggtgatatctataatgatggttggtcatctcggt  26828600                                           ----------->HVH21                                          <-----------HVH21                                          <-----------TGA1                        <----------DOF2                 --------->DEAR3(1)      --------->bZIP60(2)                     ------>ZmHOX2a(2)              <---------ALFIN1       <---------ZAT14                           --------->ARR11(3)       ------>ZmHOX2a(1)             --------->ZAT14                           <---------ARR11(3) <-- <----------DOF2 --------->DREB2C(2) --------->At4g35610                <----------DOF2 <----------DOF2 <---------DAG2 --------->ORA47(2)   <---------At4g35610    <-------GAMYB  <---------ANAC58       <-- --------At4g35610------>NtERF2 <----------DOF2        <---------At4g35610 <---------ANAC58      ----   gagcttttcctctctagcaccgccattgctgtttctttctgcagcgtcaccggtttcagcgtcgttgtatgtctctttcttgatctttctctttttcatt  26828700                                                                                              -------                          <---------MYB46(3)               <-------GAMYB                      -------           <---------GLK1(2)                              <---------ANAC58      --------->ANAC58         <---------YAB1 <-------GAMYB                     <---------ANAC58      --------->ANAC58    --------->At4g35610<---------MYB46(3)                --------->ZAT18     --------->WRKY18(1) -------AHL20(2)      <---------TOE2(3)             <---------ANAC58<---------------AGL15 <---------At4g35610 -------YAB1--------->GLK1(2)                       <---------ANAC58<---------DAG2        --------->At4g35610 ----->AHL20(2)       <---------YAB1            <---------WOX13(1)  <----------DOF2 --------->MYB52(1)   tttattagcttaagattctaaattgtggttgtggtaatcacacagtttggattggctagtgcgttggaaactttatgtggtcaagctaatggagctaagc  26828800  Previous    Next  AGI:  At1g71140.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G15170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42224.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528); contains InterPro domain MATE family transporter related protein (InterPro:IPR015521) Range:  from: 26828339    to: 26830410    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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