Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ANAC55(2)                                       --------->TGA1a                                       ========================bZIP_DOF                                       --------->O2                                       <---------O2                                       --------->ANAC46                                       --------->ANAC55(2)                                   <---------MYB52(2)                                  <---------At4g35610                                  --------->At4g35610                                  --------->ZAT2                           ----------->HVH21                        --------->ARR14(2)                        <---------ARR14(2)                      --------->LBD16  <---------TGA1a                                          ----- ---------GLK1(2)    <---------HSFB2a(2)                                                      <------ ---------ARR14(2)   --------->HSFB2a(2)                                                      ------>ZmHOX2a(2) -------->ARR14(2)<---------ARR14(2)----------->HVH21                           <------ZmHOX2a(2)  -- ->ARR11(3)      <------ZmHOX2a(1)<---------ZAT2                               <---------ARR11(3)<--- --ARR11(3)  --------->LBD16     ------->TEIL                           --------->ARR14(2)   <------ZmHOX2a(2) >GLK1(1)   <---------ANAC46  --------->ANAC58                          <---------ARR14(2)   -------- -GLK1(1)   <---------ANAC58  --------->ANAC58                          ------->TEIL<---------GLK1(2) -RVE1(1)   <---------ANAC58  --------->ANAC46                <------NtERF2 --------->LBD16 <-------- >RVE1(1)  <---------LBD16 ----------->TGA1         <----------DOF2     --------->GLK1(2)   ---------   ccgattctcaaattgcggaggacccagaactgacgcagctcacgtagggtttttcttttagggcagagaagacgaatccgagatcagaattttggatccg  26815500                                                                                    ------>ZmHOX2a(2)                                                                                  <---------AGP1                                                                                  --------->ARR11(3)                                                                                  <---------ARR11(3)                                                                                  --------->ARR14(2)                                                                                  <---------ARR14(2)                                                                                 <---------CCA1(2)                                                                               --------->ALFIN1                                                                              <-------MYC4                                                                              <-------MYC2       <---------ARR14(2)                                                     ------->PIF5     --------->DEAR3(1)                                                       <-------MYC3    *TSS                                                                      ------->MYC2    <------NtERF2                        <-------TEIL                         ------->MYC4   ------>NtERF2                      <---------ANAC55(1)                     ------->MYC3   --------->LBD16                    --------->ANAC55(2)                     <-------PIF5  --------->ANAC46                    <---------ANAC46                       --------->TGA1a <---------MYB55(2)                   <---------ANAC58                       --------->PIF3(3)    <-- <---------LBD16                      <---------ANAC58                       --------->O2         <-- --------->MYB46(3)                   <---------ANAC55(2)                    <---------PIF3(3)    --- ---->LBD16                          <---------------AtSPL3                  <---------TGA1a    <---- ---LBD16<-------TEIL                <---------------AtSPL8                  <---------O2       <---- ------->ARR14(2)                --------->WOX13(1)                        <---------ALFIN1    <----- ------MYB52(1)              <-----------GT1                             <----------------PIF3(2)<--- ->ARR14(1)         <-----------GT1  <-----------------------TaNAC69(2) --------->PCF2    <------MYB46(1) -ARR14(2)         <---------AHL20(2)--------------->AtSPL3           <---------ANAC58    <------MYB83 >ARR14(2)     <----------DOF2 ------------>CBF                       <---------ANAC58 <---------MYB52(1)   gtacccgccgattcatgctttttaatcttcttaaccaattacgtacagacacgagttagtatgtctggttttgggttccacgtggatctgtttggtttgc  26815600                 <-------MYC2                 ------->PIF5                 <-------PIF4                 ------->MYC4                 ------->MYC2                 --------->TOE1(2)                 <-------PIF5                 ------->PIF4                 <-------MYC3                <---------PIF3(3)                --------->TGA1a                --------->PIF3(3)       --------->AHL20(2)       <---------AHL20(2) <------NtERF2  --------->O2 --------->At4g35610 <---------At4g35610 <---------ZAT2 <---------TGA1a                       <----------DOF2 ----NtERF2   <------------OsbHLH66            <---------ANAC58                                    <- -------At4g35610------->MYC3                  <---------ANAC58                          --------->ARR14(2) ------>ATERF1(1)<-------MYC4           --------->ANAC58                                 <---------ARR14(2) -----RAP2.6(2) <---------O2            --------->ANAC58                               --------->LBD16 -----RAP2.3(2)<---------TOE1(2)        --------->ANAC46   ---------->ID1  <---------AHL20(2)      <- ----LBD16    <---------ALFIN1   <---------CCA1(2)   <---------DAG2   <---------YAB1 <---------LBD16 ------RAP2.3(1)=================================================bZIP_DOF --------->AHL20(2)---------   ggcagctattttattcccacgtgcgattactgatcaaatctcaagccaagcgttcccttttgtcgtcttgttctgatttaatattaaaccggaaatgacc  26815700              <---------ZAT6      <---------At4g35610      --------->At4g35610                                                                    <------- --------->WOX13(1)  <---------ANAC46                          <----------DOF2             --------->MYB52(1) -----ZmHOX2a(2)   <------MYB46(1) --------->ANAC58 --------->ATHB12                     ------------ --------ATHB12    <------MYB83    --------->ANAC58 --------->ATHB51           <---------REM1(1) -->HVH21 <---------MYB52(1)      ---------->ID1   <---------YAB1           <-----------RAV1(1)    --   gatcattcagccgctagtgtttggtttgtatattttgacgcattaatgggcttataattgggcttcttttttagactcgtgttgtcgctagcccaatgga  26815800                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                             <---------ARR11(3)                                               <------                          <---------GLK1(2)                                                   -------    ----------->HVH21--------->AtMYB61                                                        <------  --------------------->WRI1 --------->ARR11(3)                                               <------ --ATHB12            ----------->RAV1(1)                                                <-------TEIL >CBF                ------->GAMYB             ----------->GT1            *TSS         --------->CCA1(2) ------->GLK1(2)    --------->MYB46(3)  <---------TOE1(2)           <---------ATHB12  <---------ARR11(3)   taatctttgacagtatcgttcaaccacagattatcttcttcgcacgatgtgataaatacaaaattttcaaatcaagaagaaacttcaagatacaaaatta  26815900    --------->YAB1   <---------ATHB12   --------->ICU4 --------->WOX13(1) ----ICU4         <------NtERF2 --->ATHB51       --------->ALFIN1 -->ATHB1 --------->ARR11(1) --->ATHB12     <---------ANAC58                                                             -------- -->ICU4  <---------ARR14(2) --------->At4g35610                                          --------->LBD16 ---AHL20(2)    <---------ANAC46                           <---------WOX13(1)            <-----------RAV1(2) -->AHL20(1)    <---------ANAC58<-----------HVH21        --------->ATHB12      <---------ANAC46 ---YAB1----------->ARR10    <---------At4g35610     <<<<<<<<<TBF1       <-------MYC3<---------At4g35610 ---ATHB51--------->ARR14(2)------->TEIL       ---------->ID1            ------->MYC3--------->At4g35610   ttgcaatcagtagatttggcgtggatgatgcatctgtcatcgcaatcttgtcttcttcttcattgacaagttccatgtgtattgtgtagctccaggtgtt  26816000                                                                                                   --                                                                                                  <--                                                                                                <----                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                           ------->GAMYB                                                 <---------ZAT14                          --------->MYB46(3)                                             --------->ZAT14                         ------>MYB83                                                --------->GLK1(2)                         ------>MYB46(1)                                            <---------ARR14(2)                      --------->MYB46(3)                      <---------ZAT18       --------->ARR14(2)                --------->ZAT6         <-----------RAV1(1)   <---------ZAT6         <---------GLK1(2)           <---------DAG2-------->P--------->ANAC46--------->ATHB12         ------>ZmHOX2a(1) ------- ->ALFIN1  <----------DOF2<---------ATHB12       <---------WOX13(1)       ----------->RAV1(2) -------   gttctctaatcggctttatctctatccaaccatcttcacgactgtggtctaattgatttgttagtgttcttctatttcctggttcagattcttcactgct  26816100     --------->ARR11(3)             --------->AHL20(2) ------->REM1(2)                ----------->GT1        <---------At4g35610 -------ANAC46                 <---------AtMYB61    <<<<<<<<<<WRKY43 -----ANAC46                 <---------MYB46(3)     <<<<<<<<<<WRKY38 ---ZAT2                   <---------ANAC58         <<<<<<<<<<WRKY26 -->At4g35610              <-------GAMYB          <------MYB46(1)              --------->WRKY38(1) ---At4g35610         <---------ANAC46            <------MYB83                 --------->WRKY12 ---ZAT14             <---------ANAC58    <-----------------AGL1               --------->WRKY45 -->ZAT2              <---------ANAC58   <-----------GT1                      --------->DOF5.7(2) -->ZAT14  <---------YAB1  <---------ANAC58      --------->MYB59      <-----------GT1     <----------DOF2   gtgtatagttcttctcattcaattacttgggttgtggtttaaatcaccaatttggtcatcttcttgtgtttttttctatcgttgacttcgagctttacat  26816200                                                      <---------ARR14(2)                                                      --------->ARR14(2)                                                     <---------GLK1(1)                                                     --------->CCA1(2)                                                    --------->ARR14(2)                                                 <---------ANAC46                                               --------->ALFIN1                <---------REM1(1)              >>>>>>>GRF7                     --------->ALFIN1      <---------ANAC58                <             <-----------RAV1(2)             <-------GAMYB          <---------ANAC58              ---           <-----------HVH21     --------->TOE2(3)  <---------ARR14(2)    <----------DOF2       <----    <------ZmHOX2a(2)           ----------->GT1<---------MYB46(3)<---------ANAC46              <-----   agtgagatcgagatgtcaggtttctccagtggaaatgttaattctagggttgtggatatactcagtggtgttgtgcctttgttgaagcttatctgtttaa  26816300     <------MYB46(1)                                                              <----------DOF2     <------MYB83                                                      <---------ANAC58   <---------WOX13(1)                                                  <---------ANAC58 --------->ATHB12                                   <-------MYC3      <---------ZAT2 ---------YAB1                                      ------->MYC3     --------->ANAC58 ---->GAMYB                                        --------->O2      --------->ANAC58     <---------- -----At5g28300                                  <---------ALFIN1--------->ANAC58<---------ANAC58 ------GT1                                  ---------->DOF2      --------->ANAC58<---------ANAC58   ccgtgattggtctacttcttgctcatcccaagactcaattagtcccaagagccacgtttaggctcttaagcaagcttgtgtttgctttgttcttaccttg  26816400  Previous    Next  AGI:  At1g71080.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G38050.1); similar to unknown [Populus trichocarpa] (GB:ABK95382.1); contains domain PTHR15970:SF2 (PTHR15970:SF2); contains domain PTHR15970 (PTHR15970) Range:  from: 26813503    to: 26815504    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g71090.1    Description:  auxin efflux carrier family protein. similar to auxin efflux carrier family protein [Arabidopsis thaliana] (TAIR:AT5G01990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17070.1); contains InterPro domain Auxin efflux carrier; (InterPro:IPR004776) Range:  from: 26815874    to: 26817792    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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