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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                          ------->GAMYB
                                                                         --------->MYB46(3)
                                                                        -------->P
                                                                       ------->GAMYB
                                                                      --------->MYB46(3)
                                                                      <---------MYB111(1)--------->ATHB12
                                                                      <---------MYB111(2)--------->YAB1
                                                                      <---------MYB52(2) -------->ATHB1
                                                                      <---------MYB55(2) <---------ICU4
        --------->TOE2(3)                                           ----------->RAV1(1) <---------ATHB12
      --------->GLK1(2)                                          --------->ANAC46     ------>MYB83
--At4g35610                                                      --------->ANAC58     ------>MYB46(1)
->At4g35610       ---------->DOF2                  ------->TEIL  --------->ANAC58 ------->TEIL
 
caattggataatctaaattcccaaagtcagactcaatcggagcacatagtgacgaacttatcttctctacgcaacaaccacgatgaaccaaatcattgtg  26686500
                                                                         ------>ZmHOX2a(2)
                                                                         ===================HOX2a_HOX2a
                                                                        ====================HOX2a_HOX2a
                                                                       <---------ARR14(3)
                                                                       <---------ARR11(3)          -
                                                                       --------->ARR11(3)          <
                                                                       --------->ARR14(3)          <
                                                                       <---------ARR14(2)         --
                   <---------GLK1(2)                                   <---------AGP1             --
                --------->YAB1                            <---------ICU4<------ZmHOX2a(2)     ------
          --------->TOE2(3)                              <---------YAB1--------->ARR14(2)     <-----
         ----------------->AGL3                         <---------ARR11(3)           <------ZmHOX2a(1)
       --------->ARR14(2)                <---------AHL20(2)          ----------->ARR10     <--------
    --------->ANAC46               <---------YAB1       --------->ARR11(3)           ===============
 
aaattctccgaaaccacaattagattcttcaacaggttttgaatgtaattggagagcatgatcatcgcagagaagatctcgatgagaaggagatttacca  26686600
-------->HSFC1(2)                                                 <---------ARR11(1)
---------HSFB2a(1)                                                ------->TEIL
---------HSFC1(2)                      <------ZmHOX2a(1)          --------->ARR14(2)
------->ANAC58                       --------->ANAC58             <-----------ARR10
------->ANAC58                       --------->ANAC58             <---------ARR14(2)
--->HSFB2a(2)               --------->At4g35610                  <---------ARR14(1)
----HSFB2a(2) <------ZmHOX2a(2)  --------->CCA1(2)      --------->ICU4
---GT1        ================================HOX2a_HOX2a--------->YAB1
=====================HOX2a_HOX2a<----------ID1     ----------->GT1--------->GLK1(2)  ---------->DOF2
 
gaagcatcgaagaaacgatcgagtctagagcagaagagacaaggacgtttaagaccgaaataatcagcgaatctgagtatgaaataagaaaagagagagt  26686700
                                                                                                   -
                                                                                                   >
                                                                                                   >
                                                                                                   >
                                                                                                   >
                                                                                                   -
                                                                                                   -
                                         <---------TOE2(1)                                         -
                                         <---------TOE1(1)                                         -
                                      --------->ARR14(2)                                           >
                                      <---------ARR14(2)                                          --
                                --------->DAG2                                           <---------ARR14(2)
                           --------->HSFB2a(2)                                --------->YAB1      --
                           <---------HSFC1(1)<------ZmHOX2a(1)              ------->TEIL --------->GLK1(2)
                           <---------HSFB2a(2)                         --------->At4g35610       ---
                  ----------->HVH21<---------ANAC46          <---------MYB52(1)          --------->ARR14(2)
               --------->ATHB12---------->DOF2   ---------->DOF2       <---------At4g35610       <--
 
tgagcaaaatgaagaaaatgagtgaccattcgagaaaagcgtatacgaggattaaagtgattcggtttgttttccgatgaatcagagtcgcgaatttgtt  26686800
 <------NtERF2
<---------RAP2.6(3)
------>NtERF2
-------->DEAR3(1)
>>>>>>>>AtERF-4
>>>>>>>>AtERF-3
>>>>>>>>AtERF-5
>>>>>>>>AtERF-2
-------->RAP2.3(3)                                       XXXXXXXXXXXXXXXXXXXX>MIR854A-E
-------->RAP2.6(2)                                  <---------SPL7
-------->RAP2.3(2)                                 <---------PCF2
-------->ANAC46                                  <---------ANAC46
>>>>>>>>AtERF-1                                 --------->ALFIN1                      <---------ZAT2
------->ERF1   ---------->DOF2                <---------ANAC46      <------ZmHOX2a(1) <---------At4g35610
------->RAP2.3(1)                             <---------ANAC58  <------ZmHOX2a(1)     --------->At4g35610
------>At4g35610                              <---------ANAC58--------->MYB59     <-----------HVH21
-------At4g35610   ---------->DOF2            <-----------RAV1(1)*TSS  <------ZmHOX2a(1)
 
agccgccatagacgacgataaagaaagcttgagagagatagagagatttgtgtgggggacgaagttaggaaggaggagaaagacttgtcagcttaagtaa  26686900
                      <---------MYB52(1)
                <---------MYB59 <----------DOF2<---------AHL20(2)
                --------->MYB46(3)       <---------AHL20(2)
               --------->DEAR3(2)        <---------AHL20(1)
        <---------GLK1(1) ----------->HVH21   --------->AHL20(2)
    <------NtERF2--------->ORA47(1)      --------->AHL20(2)            <---------AHL20(2)
   --------->LBD16------>MYB46(1)    <---------AHL20(2)            --------->AHL20(2)             <-
   ----------->GT1------>MYB83  <---------DAG2<---------AHL20(2) --------->TOE2(3)         <--------
 <---------LBD16--------->DEAR3(1)  <---------AHL20(2)     <-----------GT1                ------->TEIL
 
gttagccggagaaatcggaccgaccattagtgacacttttttattttattttaatttgaatttgacaacattatatatatgaaaatggaaatgaagctaa  26687000
                                                                     ----------->GT1
                                                                     <------MYB46(1)
                                                                     <------MYB83
                                                                    --------->MYB111(2)
                                                                    --------->MYB59
                                                                  <---------MYB52(1)
                                                               <---------ANAC58
                                                               <---------ANAC55(2)
                                                               <---------ANAC55(1)
                                                               <---------ANAC46
                                                            <---------ARR14(2)
                                                         <---------TOE2(3)
                                                         <---------TOE1(3)
                                                       ---------->DOF2
                                                  --------->AHL20(2)<---------AtMYB61
                       --------->YAB1             <---------AHL20(2)--------->MYB46(2)
                    --------->YAB1               <---------AHL20(2) --------->MYB111(1)
                    <------ZmHOX2a(1)            <---------AHL20(1)<--------P
             <---------TOE2(3)         --------------->AtSPL8  <---------ANAC58
             --------->DAG2            <---------------AtSPL8 <---------LBD16
----------HVH21    ----------->GT1     ------->TEIL   <---------AHL20(2)     <---------AHL20(2)
-At4g35610 ---------->DOF2<-----------GT1        --------->AHL20(2)<---------MYB55(1)
 
gagtcagagaaaaaaaaaggttaggataataacacatttatgtatgtactaaattatttaaaggttacgggtaggtatatataatggaaacaatagttgt  26687100
                                                                                 <---------TOE2(3)
                                                                                <---------AHL20(2)
                                                                                --------->YAB1
                                                                      -------->ZAP1
                                                                    <---------WRKY18(1)
                                                                   ----------->HVH21
                                                 <---------GLK1(2) --------->WRKY12--------->AHL20(1)
                                  <---------ANAC55(2)              --------->WRKY38(1) <---------YAB1
                                  --------->ANAC55(2)             <---------WOX13(1)  <---------AHL20(2)
                    --------->AHL20(2)  ----------->GT1           <--------P    --------->AHL20(2)
               --------->AHL20(2)<---------------AtSPL8     <-----------GT1   <---------YAB1
     <---------TOE2(3)          --------->AHL20(2)<---------YAB1<---------MYB46(3) <---------AHL20(1)
 
ttgatattaagttttagtttatataaaataagaaattaagtactagtaaaaagattattgtttatactggttgaccgagttattaatatttttattcaat  26687200
                                                                                       <---------TOE2(3)
                                                                                 --------------->AGL15
                                                                                 <---------------AGL15
                                                                                 ------>ZmHOX2a(1)
                                                                                --------------->AGL15
                                                                                <-----------------AGL3
                                                                                <-----------------AG
                                                         <---------TOE2(3)      <-----------------AGL2
                                                         --------->MYB59        ====================
                                                  ------>MYB83                  ----------------->AGL3
                                                  ------>MYB46(1)               ====================
                                             <-----------GT1                  ------>MYB46(1)
              <---------At4g35610           <-----------GT1              <---------ALFIN1
           <---------AHL20(2)           --------->ARR11(3)              ------->GAMYB  --------->MYB59
   <---------ARR14(2)                   <---------ARR11(3)             <---------ALFIN1<---------TOE1(3)
   --------->ARR14(2)                 <---------TOE2(3)  <---------TOE1(3)    ------>MYB83
 
gttttggattcgattttatctgattacagttttttttttttgagattttaaccttccatttaggttttttgccaacacaccttcctattttaggttatag  26687300
                                       --------->ANAC58
                                       <---------ANAC55(2)
                                       ----------->GT1
                                       --------->ANAC58
                                       --------->ANAC55(2)
                                   ----------->GT1              <---------YAB1
                            <---------------AGL15              <---------AHL20(2)
                            --------->YAB1      <---------AHL20(1)   <-----------GT1
            <---------YAB1 ----------------->AGL2              <---------AHL20(1)
          --------->AHL20(2)--------------->AGL15              --------->AHL20(1)  <---------AHL20(2)
         <---------YAB1    ----------------->AGL3             <---------AHL20(2) <---------AHL20(2)
     <---------GLK1(2)     <---------YAB1    <-----------GT1  --------->YAB1    --------->AHL20(1)
============================================MADS_MADS         --------->AHL20(2)<---------AHL20(1)
============================================MADS_MADS<---------AHL20(2)   ----------->GT1 --------->ANAC55(2)
 
tctatatagattattatttatgtctgtattttcataaatagtaagtaataacatattttatcaaattatatttaacagagttatatattttttatgtatt  26687400
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AGI:  At1g70750.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16720.1); similar to unknown [Populus trichocarpa] (GB:ABK92464.1); similar to Os03g0259900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049616.1); contains InterPro domain Protein of unknown function DUF593 (InterPro:IPR007656)
Range:  from: 26683637    to: 26686866    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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