Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            ------>ZmHOX2a(1)                                        <---------HSFB2a(1)                                        --------->HSFC1(2)                                        ------>ZmHOX2a(2)                                        <---------HSFC1(2)                                        --------->HSFB2a(1)                                        =============HOX2a_HOX2a                                       ==============HOX2a_HOX2a                                       <------ZmHOX2a(2)                                      --------->AGP1                                      <---------GLK1(2)                                      <---------ARR11(3)                                      --------->ARR11(3)                                      <-----------ARR10                                      <---------ARR14(2)                                      --------->ARR14(2)                                     <---------GLK1(1) --------->ANAC55(2)                                     <---------At4g35610                                     --------->GLK1(1) <---------ANAC58                                 --------->ANAC46      <---------ANAC55(2)                                 --------->ANAC58      <---------ANAC58          <---------GLK1(2)      --------->ANAC58      <---------ANAC46                           ---      <------ZmHOX2a(2)    ===================HOX2a_HOX2a  <---------ANAC58       --------->ATHB12<--  --------->ALFIN1         ====================HOX2a_HOX2a <---------ANAC58      <---------YAB1  ---- --------AtMYB61           ------>ZmHOX2a(1)      <----------DOF2        ----------->GT1         ---- ------->DAG2      <---------GLK1(2)----------->ARR10  <---------ANAC55(1)    --------->ICU4     ---- ------>DOF2<-------TEIL  --------->TOE2(3)   ------>ZmHOX2a(1)       --------->DAG2           <----- -DOF2============================HOX2a_HOX2a--------->TOE2(3)       ---------->DOF2          <------   aaaggtggatcagattcatcaaattcttcctcaatacgcagatccttccttacttttacgtgcttctcaaaaaaagtgtcaaaatgatagaagaggtcca  26504500   --------->YAB1   --------->ATHB12   <--------ATHB1  --------->ICU4  <---------ATHB12                                                                                 -- ------>MYB46(3)                                                                                   -- -------MYB55(2)                                                                                   -- ----->ANAC58                                                        ---------->DOF2     <------NtERF2 ----->ANAC58                       --------->ANAC46    --------->ARR14(2)               --------->RAP2.3(1) ----->ANAC46                       <---------ETT(1)    --------->GLK1(2)  <-------TEIL --------->At4g35610 ----ALFIN1            ---------->DOF2     --------->YAB1  <---------YAB1<---------GLK1(2)--------->RAP2.6(2) -TEIL                --------->AHL20(2)  <-------TEIL  <---------ARR14(2)--------->CCA1(2)     -----   cccaatgatggaagtcaccctaaataaaagaaaaaaacccgacattcatcaaaacgagaatatgacagtataaaagattcacaaacaaggagccgaaaca  26504600            --------->ARR14(2)            <---------GLK1(1)        ---------->ID1   --------->HSFB2a(1)                                                                            <--  ------->TEIL                         <---------ANAC58                                           <-- ------->ANAC58                        <---------ANAC58                                         <---- ------->ANAC58           <---------ANAC58                           --------->ZAT6   <-------------- ------->ANAC46           <---------ANAC58      --------->At4g35610<-----------GT1    <-------------- ---->TOE1(2)         ---------->DOF2<---------ARR14(2)--------->ALFIN1             --------->MYB52(1)   cacgaaccttgtcgaattcccagcgaaagcttgcaaggggttcttgtattagctcaagtggaacagaagtaacactattgatgaacaaactgattttggt  26504700  <------MYB46(1)                                                                                   -  <------MYB83                                                                                     -- ----MYB46(1)                                                                                     <-- ----MYB83                                         ---------->DOF2                               ---- ----P                                          <-------TEIL          <---------ANAC58           ---- ---AGL3       ------->TEIL                    --------->CCA1(2)      <---------ANAC58          ----- ---AGL2    <---------YAB1                ---------->DOF2        --------->ALFIN1           <--------   aggctggtacaagtatgaatataacaagggttaacacagccagtaaaagatacaaaagcctcacaaggtttggcttaagaactcaaaccccattatacca  26504800                  --------->TOE1(3)                  --------->YAB1                  <---------------AGL15                  --------->TOE2(3)                  --------------->AGL15                 ----------------->AGL1                 ----------------->AG                 ----------------->AGL2                 ====================================================================================     <------ZmHOX2a(2)   ----------->GT1                                                 ============    --------->ARR11(3)  --------->ANAC46                                                 ------------    <---------ARR11(3)--------->MYB52(1)                                                <---------ANAC58   --------->YAB1----------------->AGL3                                                 <---------ANAC58 --------->DOF2  <-----------------AGL3                                               <---------AHL20(2) ------->YAB1   -------->P                                                            <-----------GT1 -------ATHB12 ------->GAMYB                                                      <---------YAB1 -->MYB46(1)  --------->MYB46(3)                                                  <---------AHL20(2) -->MYB83     <---------MYB55(2)                                            <---------TOE2(3) ---->WOX13(1)<---------MYB111(2)                               --------->MYB52(1)--------->AHL20(2) ---GT1 --------->At4g35610      ---------->DOF2         ---------->DOF2    <---------TOE1(3)     <--   atcaaagatcatctcaacaaccataaacggaaactaaaagagccatgttctctaaattccaaagacaaacagttgattaaggttttaattacttggttta  26504900        <---------ALFIN1                                            ----------------->AGL2     --------->ANAC46                    --------->ATHB12        <---------At4g35610   --------->ANAC58               --------->HSFC1(2)             --------->GLK1(1)   --------->ANAC58         ------>ZmHOX2a(1)                    --------->At4g35610 --------->ZAT6    <---------ARR11(3)   --------->ICU4           <---------GLK1(1) ====MADS_MADS     <-----------ARR10    <---------YAB1         <------ZmHOX2a(1) =====================================================================================MADS_MADS  ---- --->AGL15         --------->ARR11(3)<-------TEIL ------------>CBF  ----------------->AGL3 --------->ICU4 ----ZmHOX2a(1)--------->LBD16    <---------HSFC1(2)       <---------MYB52(1)    <------ZmHOX2a(1)   ggaacactcaccacttccgaagctcttctccttcgaagcttcatgatttagaaacaatccagttaggagctccaaaactagaaggattaagcactgattt  26505000                         --------->YAB1          --------->ANAC58          --------->ANAC58          --------->ANAC46    ------>ZmHOX2a(1)    <---------ICU4   --------->TOE1(3)     <--------HAHB4                                                     ------>ZmHOX2a(2)   --------->TOE2(3)    <---------YAB1            <---------ICU4            --------->RVE1(1)    ---- ----->AHL20(2)    <------------CBF<------------CBF                   --------->YAB1      --------->ARR11(3)   taaatcctcaacacgatagagaattgatcattacaccgattgagagaactagtaatcacttgtggaatcgaatcaaaaatatcgacgagggtgatctggt  26505100                        --------->ALFIN1                       <-----------HVH21                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                                                             <--                   --------->ARR14(2)                >>>>>>>>>TBF1                                ---                   <---------ARR14(2)          >>>>>>>>>TBF1                                  <------            --------->ATHB12                 ------------------------>ANAC81  ---------->DOF2 >>>>>>>          <---------WOX13(1)                >>>>>>>>>TBF1              ---------->DOF2    <---------ARR14(2)         <------------CBF      --------->At4g35610>>>>>>>>>TBF1   ---------->DOF2         --------->ARR14(2) -------->CBF     <---------GLK1(1)       ------------------------>ANAC81 <----------ID1 <------ZmHOX2a(1)   ccaatactttggattgatggagatcggtgaggcagacgaacgagaagaagaagaagaagaagagagaagaaagaaaaggagaaagagcgaaggatttgac  26505200       --------->ARR11(3)       <---------ARR11(3)                 <---------TOE2(3) --------------------->WRI1   ------>ZmHOX2a(2) -------ARR11(3)             <------ZmHOX2a(2)         ------>ZmHOX2a(2)                            < ------>ARR11(3)            <---------ARR14(2)        <------ZmHOX2a(2)                            -- -----GT1                   --------->ARR14(2)       --------->ARR11(3)                         <---- >>>WRKY63     <---------TOE1(2)--------->LBD16      <---------ARR11(3)                    ----------   tatcttggagataatcgcaagtttggaagcgatccgaagaaactagggttttgaagatcgcatattagagagaagggatttgatagggagagagaaagac  26505300                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                  <---------AHL20(2)                                                           <---------AHL20(2)     --------->AHL20(2)                                                          --------->AHL20(2)  <---------DEAR3(2)                                                          <---------AHL20(1)  <------MYB46(1)                           --------->SPL7>>>>>>>>>>>>>>>>>LFY                 <------MYB83  <-------- -----------HVH21        <---------SPL7 ---------->ID1    <---------AHL20(2)  <---------MYB46(3) ------->ALFIN1          <-----------HVH21       <---------DREB2C(2)          ----------->GT1 -----DEAR3(1)          <---------DEAR3(2)    <-----------RAV1(1)            <---------DEAR3(1) >DOF2        --------->GLK1(1) --------->AHL20(2)<---------DEAR3(2)        <---------ORA47(1)     <-   ggtgtgagagagagagatttctaagacggtccgataaattttgttccaatgtcggtttaataaaattttgttcaattggtcggtttaattaaaaaaacca  26505400  Previous    Next  AGI:  At1g70320.1    Description:  UPL2 (UBIQUITIN-PROTEIN LIGASE 2); ubiquitin-protein ligase. Identical to E3 ubiquitin-protein ligase UPL2 (UPL2) [Arabidopsis Thaliana] (GB:Q8H0T4;GB:O64604;GB:O64605;GB:Q0WL35;GB:Q9M7K6); similar to UPL1 (UBIQUITIN-PROTEIN LIGASE 1), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G55860.1); similar to putative ubiquitin-protein ligase 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD22340.1); similar to hypothetical protein OsI_029537 [Oryza sativa (indica cultivar-group)] (GB:EAZ08305.1); similar to hypothetical protein OsJ_027403 [Oryza sativa (japonica cultivar-group)] (GB:EAZ43920.1); contains InterPro domain Armadillo-type Range:  from: 26492185    to: 26504944    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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