Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <----------ID1                  --------->ANAC58                  --------->ANAC46                  ----------->GT1             ------>MYB46(1)          --------->TOE1(3)                   ------>MYB83        <---------ARR11(3)                   ----------->RAV1(1)                                    <        --------->ARR14(2)                  --------->AtMYB61                                       - -------->DOF2    --------->ANAC58         --------->MYB46(3)                                  <----- ---->YAB1--------->TOE2(3)             <----------ID1                                        <------ --->GT1<---------ARR11(1)            --------->ANAC46                                      ========= ->YAB1<---------CCA1(2)        <----------DOF2     <---------------AtSPL8                  ---------   ataaagtccaaatcttaaatacgaaaaaatgtttctttctaagcgaccaacaaaatggtccaaatcacagaaaatgttccataatccaggcccattaagc  26443100                              <---------AHL20(2)                              --------->AHL20(2)                              <---------ICU4                             <---------ATHB12                             --------->AHL20(2)                     <-----------TGA1                     <-----------HVH21                    --------->ANAC58                    --------->TGA1a                    --------->O2              --------->ANAC58                    <---------O2 <-----------GT1                    --------->ANAC58          --------->ANAC58                    --------->ANAC55(1)      --------->SPL7                    <---------TGA1a          --------->SPL1(2)      --------->ANAC58     --------->WOX13(1)------->TEIL      --------->ANAC58--------->TGA2(2)      <-------TEIL ---------ATHB12    --------->ANAC55(2)    <---------SPL7                                 --------->At4g35610 -------->MYB46(3)  --------->ANAC46      --------->ANAC58                          <-------TEIL ----At4g35610      --------->bZIP60(2)   --------->ANAC46                          ------->TEIL ---TOE2(3)        <-----------STF1       --------->ANAC58 <---------REM1(2) <---------MYB52(2) <---- =============================bZIP_DOF   --------------->AtSPL3              --------->MYB46(3) ----- ->DOF2----------------------->TaNAC69(2)<---------------AtSPL3 ----------->GT1--------->MYB52(1)   -   taatcaccaagtaatacattacacgtcaccaattaatacattacacgtacggccttctctcttcacgagtaatatgcaaacaaacgtacattagctgtaa  26443200                                    <---------ANAC55(2)                                    <---------ANAC46                                    --------->ANAC46                                    ----------->GT1                                    --------->ANAC58                                    --------->ANAC55(2)                                    <---------ANAC58                                    <---------ANAC58                                    --------->ANAC55(1)                                    <---------ANAC55(1)                                  <-----------GT1                             --------->ANAC55(2)                             --------->O2                                    <---------DAG2                             --------->ANAC58                      --------->ANAC58         --------->AtLEC2    <---------ANAC55(2)                   --------->ANAC58         --------->ANAC58    --------->ANAC58                      --------->ANAC46         --------->ANAC46<-----------HVH21     --------->AtMYB61  ------>MYB46(1)         --------->ANAC58------>MYB83          <---------ALFIN1   ------>MYB83      <---------ATHB12   ------>MYB46(1)    --------->ANAC46    --------->TOE2(2) -----------AtSPL8      --------->ANAC46    <-----------GT1     --------->TOE1(2) ---------->AtSPL8    ----------->RAV1(2) <-----------GT1   ------>ZmHOX2a(1)<----------DOF2 ------>TEIL        <-----------GT1 --------->ANAC58       <---------MYB59<-----------GT1   tgtactcactcatgcaacgtcttaacctgccacgtattacgtaattacaccactccttgttcctaacctacgcatttcactttagcgcatgttagtcaaa  26443300                                                               --------->bZIP60(2)                                                               --------->TGA1a                                                               ===================================MYC_MYB                                                           --------->ZAT2                                                           ------>MYB83                                                           ------>MYB46(1)                                                          --------->ANAC58                                                          --------->ANAC58                                                         --------->MYB46(3)                                                    --------->DEAR3(2)                                                    --------->ANAC58                                                    --------->ANAC58                                                  --------->MYB52(1)     --------->ATHB12                                                 <---------SPL7<---------O2           <---------bZIP60(1)                                                <---------MYB52(2)     <---------WOX13(1) ------->GAMYB                   --------->AHL20(2)           --------->MYB46(3)   --------->ATHB12 --------->bZIP60(1)      --------->YAB1--------->AHL20(2)      <---------ATHB12   --------->O2      ----------->GT1 <---   aaacacaaacataaactacaaataaaaaaactcaaaacaaaacccaatgaacgaacggaccagccccgtctcgattgatggaacagtgacaacagtcccg  26443400                                                                                             <-------                                                                                           <---------YAB1                                                                                         -------->ATHB1                         ------->GAMYB                                                   <---------ICU4                        <------------MYB.PH3(1)                                         --------->ICU4                        <------------AtMYB77                                            --------->AHL20(2)                       <---------At5g28300                                              <---------AHL20(2)                --------->MYB52(1)                                                      <---------YAB1               --------->ARR14(2)                                                       --------->AHL20(1)             ------->GAMYB                                   ----------->TBP         --------->AHL20(2)           <-----------------AGL1                            <---------YAB1       --------->AHL20(2)          --------->MYB52(1)                              <---------YAB1         --------->AHL20(2)   <---------LBD16  --------->At5g28300                  --------->AHL20(2)  <---------AHL20(2)   ---  <---------LBD16   --------->DOF5.7(2)        --------->MYB46(3)            --------->AHL20(2)   --- ------MYB52(1)<---------ARR14(2)              --------->REM1(1) --------->AHL20(2)  <---------AHL20(2)   ttttctcgggcataacggaaacggtaaccgtctctctgtttcatttgcaacaacaccatttttataaataaaaacacatttaaataaaaaattattaaaa  26443500       --------->RVE1(1)      --------->GLK1(2)      <---------ARR11(3)   *TSS      --------->ARR11(3)----------->TBP                                --------->ANAC46     --------->CCA1(1)<-----------TBP               --------->TOE2(3)--------->ANAC58     --------->RVE1(1)--------->AHL20(2)            --------->TOE1(3)--------->ANAC58 --AHL20(2)     <---------ANAC58            ----------->GT1          --------->ANAC46 ------>TOE1(3) <---------ANAC58         ------->TEIL              <---------ALFIN1               --- ------>TOE2(3) <---------ANAC46      <---------ATHB12            <---------REM1(2)           <------   cctcaaaaaatctctgtttcttgtttatatatccaaacaaatgaatgtgttaaaccttcactcttctctccacacaaaattcaaaaacctcacatttcac  26443600                       ----------->HVH21                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    <---------ARR11(3)                    <---------AGP1                               <---------LBD16                    <-----------ARR10                        --------->ARR14(2)                    --------->ARR11(3)             <-------TEIL <---------ANAC46         <----------DOF2                   <---------CCA1(2)       --------->LBD16   <---------ARR14(2)     <---------At5g28300                 --------->HSFC1(1)      <---------LBD16   --------->LBD16          <---------DOF5.7(2) ------>ZAT14    <---------HSFB2a(2)  --------->ZAT2     <---------LBD16           <-----------GT1 -----GT1        --------->HSFB2a(2)  <---------ZAT2  <---------At4g35610      <------ZmHOX2a(1)   ttctctcttctcgcttcttctagatctcaccggtttatctagctccggtttgattcatctccggttatggggagagaatgaggagttaccgttttagtga  26443700                                                                                 <---------MYB46(3)                                                                              --------->MYB52(1)                                                                              <---------DOF5.7(2)                                                                      --------->LBD16                                                                    <---------LBD16    <---------GLK1(1)                                                            <---------ANAC46 <---------WRKY12                                                          --------->LBD16    <---------WRKY45       ------->MYC3           --------->CCA1(2)         <---------LBD16<---------MYB52(1)           -       <-------MYC3       <---------TOE2(3)<---------ANAC46<---------MYB52(1)<---------WRKY38(1)   <-   ttatctacacatgtctgtttcattctctaacgatatggatttgttttgtggagaagactccggtgtgttttccggtgagtcaacggttgatttctcgtct  26443800               <---------ANAC58         <-------TEIL     <-------TEIL                                                           <---------ARR11(3)    <--------P <---------ANAC46                                        --------->ICU4 <---------TOE2(2)              <---------TOE1(2)                --------->LBD16 <---------TOE1(2)             <---------ANAC46                  ------>ZmHOX2a(1) -------->LBD16<---------ANAC58<---------ANAC58                 <---------LBD16 --------TOE1(1)               <---------ANAC58     <-----------HVH21  <---------YAB1               -   tccgaggttgattcatggcctggtgattctatcgcttgttttatcgaagacgagcgtcacttcgttcctggacatgattatctctctagatttcaaactc  26443900                                      <---------ARR14(2)                                      --------->ARR14(2)                                      <---------GLK1(2)                        <---------GLK1(2)                        --------->ARR14(2)                        <---------ARR14(2)                       --------->HSFC1(2)                       <---------HSFB2a(1)                       --------->HSFB2a(1)                       <---------HSFC1(2)              --------->LBD16    <---------AtLEC2         <---------ANAC58        <---------ANAC46         <---------ANAC58--------->GLK1(2)                                                          -        <---------HSFC1(2)   --------->LBD16                 <---------DAG2                      <---        --------->HSFC1(2)   <-----------HVH21               <----------DOF2                     ----        --------->HSFB2a(1) <---------ANAC58              <-----------GT1                      ------        <---------HSFB2a(1) <---------ANAC58    <---------ANAC58                     <-----------GT1- ----->ZmHOX2a(2)     ----------->ARR10         <---------ANAC58  <-----------GT1 <---------AHL20(2)-   gatctctcgatgcttccgctagagaagattccgtcgcatggattctcaaggcgagcctattcactttttttctctacctctcatttttttcaatgctaaa  26444000  Previous    Next  AGI:  At1g70209.1    Description:  unknown protein Range:  from: 26443316    to: 26443459    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g70210.1    Description:  CYCD1;1 (CYCLIN D1;1); cyclin-dependent protein kinase regulator. Identical to Cyclin-D1-1 (CYCD1-1) [Arabidopsis Thaliana] (GB:P42751;GB:O04525;GB:Q8W2K2); similar to CYCD2,1 (CYCLIN D2,1), cyclin-dependent protein kinase regulator/ protein binding [Arabidopsis thaliana] (TAIR:AT2G22490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40949.1); contains InterPro domain Cyclin D (InterPro:IPR015451); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IP Range:  from: 26443527    to: 26446492    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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