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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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    --------->AtMYB61                                                         --------->AHL20(2)
 --------->AtMYB61                                                          --------->ARR11(3)
------->REM1(1)                                                   --------->ATHB51
------->ANAC46                           --------->AHL20(1)       --------->ATHB12
------>ZAT14                             <---------AHL20(2)       -------->ATHB1
-------ZAT14                             <---------AHL20(1)       <---------ICU4            --------
---->ANAC46     <---------ARR11(3)      --------->AHL20(2)       <---------YAB1            <--------
-->ANAC46       --------->ARR11(3)      --------->YAB1           --------->ICU4<---------AHL20(2)
-->ZAT6----------->GT1   --------->ARR11(3)                   ------------>ATHB5       --------->AHL20(2)
>YAB1---------->DOF2     <---------ARR11(3)             <-----------GT1     <---------ARR11(3)
 
tacaccaccaaagtaataagctcttgaagataataagtttcaattatattggacaatttttatcttccattattgacaagatttatttgaataaataata  26433800
                                                                                                   <
                                                               --------->ZAT18                     -
                                                               --------->ZAT14                   <--
                                                       <-----------RAV1(2)                  --------
                                       <---------ARR11(3)      <---------ZAT14             <--------
             --------->AHL20(2)        <---------AHL20(1)   ----------->GT1                <--------
             <---------AHL20(2)        --------->AHL20(1)  --------->DAG2        <-----------HVH21--
        <---------YAB1          <-----------GT1       <------ZmHOX2a(2)    <----------DOF2--------->WRKY18(1)
     <---------YAB1          --------->YAB1          <---------ARR14(2)  <---------------AGL15  <---
   <---------MYB46(3)        <---------ICU4          --------->ARR14(2)  --------------->AGL15<-----
->YAB1  --------->ICU4      <---------YAB1         --------->LBD16  --------->At5g28300<---------MYB46(3)
-AHL20(2)--------->AHL20(2) --------->ICU4       <---------LBD16   ----------->GT1 --------->ATHB12-
 
gtttgtttgttattatttaaatctattagttattattaccaatatttttaaaaccggatcagaaggtgaactgtaactcttttgggtcattgggtcaatc  26433900
      <-------GAMYB
 <---------SPL7
<------MYB46(1)
<---------DEAR3(2)
<------MYB83                                                                 --------->YAB1
---------MYB46(3)                                                        --------->AHL20(1)
-------->MYB52(2)         <---------TOE2(3)                             --------->AHL20(2)
-------MYB52(1)         <---------AHL20(2)                          --------->AHL20(2)
->WOX13(1)              --------->AHL20(2)                  --------->AHL20(1)
-WRKY12                <---------ATHB12                     <---------ICU4  <---------YAB1        <-
-WRKY38(1)           --------->WOX13(1)                     <---------AHL20(1)                  <---
------->SPL7      <-----------HVH21                         --------->ARR11(3)                 <----
------SPL7      <-------MYC3                         ------->TEIL --------->HSFB2a(2)          -----
----ATHB12   <---------ALFIN1                     <---------YAB1  <---------HSFB2a(2)         <-----
-------->MYB59  ------->MYC3            <---------AHL20(2)  <---------ARR11(3)             <--------
 
gttcggtccggttgaaccacatgtcaattaatgtatagttttttttatttcttatgaatctaatattttctataaatatatgatagtctagtatttgatt  26434000
                                             --------->TOE2(3)
      --------->ARR11(3)                    --------->ANAC58
      <---------ARR11(3)                    ----------->GT1
     <---------GLK1(1)                      --------->ANAC58
--------YAB1                      <-----------GT1                                       --------->ZAT18
------AHL20(2)       <----------DOF2      --------->MYB52(1)                            <---------ZAT14
-----AHL20(2)        <---------DAG2     <---------MYB52(2)                              --------->ZAT14
---->AHL20(2) --------------->AtSPL8--------->MYB46(3)                              --------->DAG2
----WOX13(1) <---------At5g28300--------->AHL20(2)  <---------YAB1           <----------ID1
-AHL20(2)<----------DOF2 <-----------GT1--------->MYB46(3)      <---------TOE2(3)  ---------->DOF2
 
tattttagaaatcttttactgtagctttttaccaatttaacaaacaaacgtaaatacaattgtttttaagaaaacgttttgggccaaaaagtatactaat  26434100
                            <---------RVE1(1)
                            <---------CCA1(1)
                           --------->ARR11(3)
                           <---------ARR11(3)
                     <----------DOF2
              <------------CBF                                                              ------->TEIL
             --------->ATHB12                                                          <---------At4g35610
            <---------YAB1<<<<<<<<<RAP2.2        <-----------ARR10                     --------->At4g35610
            <---------AHL20(2)     <---------At4g35610                               <-----------RAV1(2)
           <---------AHL20(2)   <---------AHL20(2)     ------------>CBF       <---------At4g35610---
 
cgggcctagcctatttttattgggcttttagatattttatctgatcagagagactcttcccaatgtctctctgtttagggcatcttctccagatgaacca  26434200
                                                                                                ----
                                                                                                ----
                                                                                                ----
                                             <---------YAB1                                   <-----
                                           --------->YAB1                                     ======
                                      <---------ZAT18                                        <------
                                      --------->ZAT14                                       --------
                                      <---------ZAT14                                      <--------
     *TSS                       --------->GLK1(2)                             --------->At4g35610  -
  ------------>CBF              --------->ARR14(2)                  <----------DOF2        ---------
------->DOF2 <---------YAB1     <---------ARR14(2)    <----------DOF2 ---------->DOF2      <--------
 
aaaaccccaattcgttaccattgctctgtttttcaaatctgtgaactcataatagagcttttgaagaagtgcttaaagatgagcttagttctcagattca  26434300
                                                        --------->LBD16
                                                      <---------LBD16   --------->LBD16
                                                     --------->MYB52(1)------->GAMYB
                                                   <---------ARR14(2)  --------->DEAR3(1)
                                                   --------->ARR14(2) --------->DEAR3(2)
                                                  --------->At5g28300 --------->MYB46(3)
  --------->TOE2(3)                               <-------GAMYB      ------>MYB83
----->ANAC46                                     <---------DEAR3(2)  -------->P
----->ANAC58                                     <---------MYB46(3)  ------>MYB46(1)
----->ANAC58                                    <---------DEAR3(1)   --------->MYB52(1)
------RAV1(2)                                 ------------>AtMYB77  ------>MYB46(1)
===========RAV                         <---------HSFB2a(2)          ------>MYB83
-TEIL                                  --------->HSFC1(1)         --------->MYB46(3)
->GLK1(2)                              --------->HSFB2a(2)        <---------MYB55(2)
-ARR14(2)                    --------->ZAT6<---------ARR14(2)    --------->ANAC46
---------->RAV1(1)      <---------GLK1(2)  --------->ARR14(2)    --------->ANAC58                 >>
>ARR14(2)      --------->TOE2(3)   <----------DOF2<-----------HVH21 --------->MYB52(1)         >>>>>
-GLK1(2)--------->TOE2(3)    <-----------GT1 <---------DEAR3(1)  --------->ANAC58           >>>>>>>>
 
ggcaacatttatctcaaacctcatccagattatcacttctttctcgaatcggcggttaccggagttacacccaaccggcgaagattgaagatgaagaaga  26434400
                                                                                 <---------ANAC46
                                                                                 ------>ZmHOX2a(2)
                                                                                <------ZmHOX2a(2)
                                                                               --------->ARR14(2)
                                                                               <---------ARR14(2)
                                                                           ------>MYB83
                                                                           ------>MYB46(1)
                                   <------ZmHOX2a(2)                      --------->MYB52(1)
                       ----------->RAV1(1)              ------->GAMYB    --------->AtMYB61
                       --------->MYB52(1)   <----------DOF2              --------->MYB46(3)
                 <---------At4g35610   <---------At4g35610           <---------ZAT18
>>>>>>>TBF1      --------->At4g35610   <---------ZAT2----------->RAV1(1) --------->DEAR3(1)
>>>>TBF1      ---------->DOF2     <---------ARR14(2) --------->MYB52(1) --------->MYB46(3)
>TBF1   <------ZmHOX2a(2)       <---------YAB1     ------>ZmHOX2a(2) --------->ZAT18
 
agaagaattcgatcagagaaagctcccaacagattacgatccagctacttttgatccaacagagcatcgaagtccaccaacggatcgtgtattcagactc  26434500
                     <---------ICU4
                     --------->ATHB12
                    --------->ICU4
                    <---------YAB1
                   --------->TOE2(3)
                  --------->YAB1                                                     ------->GAMYB
                  <---------------AGL15                                             --------->MYB46(3)
           <---------CCA1(2)                      <---------AHL20(2)               ------>MYB83
       ------>ZmHOX2a(2)                 <------MYB83                              ------>MYB46(1)
      <------ZmHOX2a(2)                  <---------MYB46(3)   ---------->DOF2     ==================
     <---------ARR14(3)                  <------MYB46(1)   >>>>>>>>>TBF1          ----------->RAV1(1)
     <---------ARR11(3)              --------->ZAT2 --------->YAB1      <---------ANAC46        <---
     --------->ARR11(3)     <---------GLK1(1)    --------->YAB1        <---------LBD16       <------
     --------->ARR14(3)<---------YAB1<---------ZAT2<---------YAB1    ----------->HVH21     <--------
 
gtagacgagatctcatctctaacattattagaaatctccgagcttggttcgattataatgaagaagaaaggtatgacggagttaccaacagtcgctgtta  26434600
                            <------MYB46(1)
                        <-----------RAV1(1)  <------MYB46(1)
                      <------MYB46(1)<---------MYB46(3)
                  <---------ANAC46  <---------DEAR3(1)
                  --------->ALFIN1  <---------AtMYB61
               <---------AtMYB61 <---------AtMYB61
               --------->ALFIN1  --------->ALFIN1
             <---------MYB46(3)<---------MYB46(3)
         --------->ALFIN1   <------MYB83    <---------AtMYB61
         <---------MYB46(3)<---------MYB46(3)<------MYB83
       <---------ZAT2 <------MYB83<---------MYB46(3)
       --------->At4g35610 <---------AtMYB61--------->ALFIN1
       <---------At4g35610<--------P--------->ALFIN1
  <---------LBD16 <-----------RAV1(1)--------->MYB55(2)
 =============================RAV<---------DEAR3(1)                <---------ZAT14
 ----------->RAV1(2)<--------P--------->ALFIN1              <---------ANAC58
=============RAV <xxxxxxxxxxxxxxxxxxsmallRNA(le3)           <---------ANAC46    --------->ALFIN1
------YAB1  --------->ALFIN1<---------MYB46(3)              <---------ANAC58 --------->DAG2
---MYB52(1) <---------AtMYB61 <---------AtMYB61      ---------->DOF2        ---------->DOF2>>>>>>>>>TAC1
--DOF2 --------->ZAT2<---------AtMYB61 <---------ANAC46  --------->ALFIN1--------->At4g35610      <-
 
tgaaacctggagctggtggtggtgttggtgttggtggtggtggtgggatggtgagtcaaagtggtgtgagtgaagaagctaaagtggagaagacagtgtt  26434700
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AGI:  At1g70185.1   
Description:  other RNA
Range:  from: 26433396    to: 26433732    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At1g70190.1   
Description:  ribosomal protein L12 family protein. similar to ribosomal protein L12 family protein [Arabidopsis thaliana] (TAIR:AT4G37660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64031.1); contains InterPro domain Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719); contains InterPro domain Ribosomal protein L7/L12, oligomerisation; (InterPro:IPR008932); contains InterPro domain Ribosomal protein L7/L12, C-terminal; (InterPro:IPR013823); contains InterPro domain Ribosomal protein L12, chloroplast (InterPro:IPR015608)
Range:  from: 26434206    to: 26435241    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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