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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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     ---------->DOF2
   --------->At5g28300
  ----------->GT1
  <---------ANAC46               <---------YAB1
--------->ZAT18               ----------->GT1
<---------ZAT18          <---------ANAC58                            <---------GLK1(2)
->AHL20(1)               <---------ANAC46                        <---------At5g28300           <----
--AHL20(2)               <---------ANAC58                       <-----------GT1      <---------AHL20(2)
->AHL20(2)          <---------REM1(1)  ---------->DOF2 <---------ARR11(3)            --------->AHL20(2)
>AHL20(2)   ----------->GT1 ----------->GT1            --------->ARR11(3)         --------->YAB1
 
tggtgcggtaaagaatggtaaaattgtagcgaggtgataatagaaagttgttaagaaacatctcaaattacagcatcttggccgataataaaactaatat  26380600
                                   <---------ANAC58
                                   <---------ANAC58
                           <---------ANAC58
                    <---------AHL20(2)                                <---------ALFIN1
                   --------->AHL20(2)                                --------->ZAT14
                   <---------AHL20(2)                                --------->ZAT18         <------
        <---------ICU4     <---------ANAC58                          <---------ZAT18    <---------ZAT6
        --------->YAB1    ---------->ID1                       --------->ZAT2        --------->LBD16
<---------YAB1 <---------YAB1   >>>>>>>ZML2<----------DOF2     <---------ZAT2       --------->LBD16
-------GT1<---------YAB1 <-----------GT1<----------DOF2    <---------ATHB12  ---------->DOF2 <------
 
actatgtttgatcatcatatgatttatttttcgttctagcctgcttctttgattcgtagccaaacaagctggagcactcccaaagtcccgagtcttaacg  26380700
                                                                                               <----
                                                                                               <----
                  ---------->DOF2                                                         --------->ZAT6
               <------ZmHOX2a(2)                                                         <---------TOE2(3)
              --------->ARR11(3)                                                        <-----------GT1
              <---------ARR11(3)                                     ----------->HVH21<---------ATHB12
             ------->GAMYB                                    <-----------GT1         <---------MYB52(2)
           <---------TOE2(3)                        <---------HSFB2a(2)      --------->YAB1    <----
          <-----------GT1----------->RAV1(1)        --------->HSFB2a(2)     <-------TEIL--------->MYB52(1)
---TOE1(3)--------->MYB52(1)       ------->TEIL  ------>ZmHOX2a(1)  --------->SPL7------------>CBF
---TOE2(3)<---------DOF5.7(2) ---------->DOF2    <----------DOF2  <-----------HVH21 --------->WOX13(1)
 
ttttatggcccattaacgatctaaagcccaacataaagaacctatttctatcctttgagaagttttctctgtccgacgattcatagccaattaacgctaa  26380800
                      <---------AHL20(1)                                         <---------ARR11(3)
                      <---------ARR11(3)                                         --------->ARR11(3)
                      --------->AHL20(1)                                  -------->HAHB4
                      --------->ARR11(3)                                 --------->ICU4
           <---------AHL20(2)                                       --------->ANAC55(2)
      <---------AHL20(2) <----------DOF2             <---------ARR11(3)  <---------YAB1
 <---------YAB1      --------->CCA1(1)        <-----------GT1     --------------------->WRI1
-----YAB1 --------->AHL20(2)         ---------->DOF2 --------->GLK1(2)<---------AHL20(2)    <-------
-----TOE1(3)         --------->RVE1(1) ----------->GT1          --------->AHL20(2)          <-------
-----TOE2(3)   --------->TOE2(3) ---------->DOF2 <---------MYB59<---------AHL20(2)          --------
 
gattactatttgatttaatctaaaatatctttagcgaaaagaaagttatttaccaaaatctaaaaatttatatgtaattatcgaaatctttttaaaaaat  26380900
        -------->HAHB4
       <---------YAB1
       --------->ICU4
    <---------AHL20(2)                           --------->TOE2(3)
  <---------ANAC55(2)                       <----------DOF2   >>>>>>>>>MYB98                --------
  ----------->GT1            ------------>CBF    <----------DOF2          --------->CCA1(2) <-------
  --------->ANAC55(2)    --------->YAB1 ------>MYB46(1)   --------->TOE1(3) <---------ANAC55(2)  ---
--AHL20(1)           <---------YAB1     ------>MYB83      --------->TOE2(3)<-------TEIL <-------TEIL
--AHL20(2)     --------->ARR11(3)       -------->P     <-----------GT1 <---------------AtSPL8  -----
->AHL20(2)     <---------ARR11(3)  <-----------GT1  --------->YAB1   ---------->DOF2<-----------RAV1(1)
 
ttgatatgtaattatcgaaatcttcttataagaacaatataccaactcttttctttaataaccctaacaaaaaaaagatacataaatctggtgcatatac  26381000
                                                                                               -----
         --------->ANAC46                                               <----------DOF2       ------
      --------->ARR14(2)                                                <---------DAG2        ------
->ARR14(2)                              --------->MYB52(1)           <---------ALFIN1         ------
--ARR14(2)                           --------->YAB1            --------->ARR14(2)        --------->ANAC46
------>ANAC46            ------------>CBF  ----------->GT1  ------>ZmHOX2a(1)            --------->REM1(1)
---->ANAC46<---------CCA1(2)        <---------YAB1 --------->YAB1 --------->ANAC46       --------->ZAT6
 
acatctctctatccgtctctctctgggtttcaatggattatgaaaacggagaaataatagctcctaaatccaccactttatgggatagacttacaccacg  26381100
                       <---------ANAC58
                       <---------ANAC46
                       <---------ANAC58
                  --------->ALFIN1
                 ------->MYC2
                 <-------MYC2
                --------->TGA1a
                ==========================================MYC_MYB
                --------->ANAC55(2)                                                             ----
                <---------ANAC55(2)                                                             <---
                <---------ANAC58                                                                ----
                <---------ANAC46                                                                ====
   --------->DAG2<-------MYC3                                <---------TOE2(3)                  ----
  ========================bZIP_DOF                         --------->YAB1                       <---
  ---------->DOF2------->MYC3                              --------->ATHB51              --------->ANAC58
------>RAV1(1)  <---------TGA1a                    --------->At4g35610                   --------->ANAC58
--->ANAC58      <---------O2                      ------->GAMYB                     --------->At4g35610
--->ANAC46      <---------ANAC58                 --------->MYB46(3)                 <---------At4g35610
--->ANAC58      --------->O2          ------>ZmHOX2a(2)   --------->ICU4          --------->YAB1<---
 
acaaaaaaagtatgtgttcacgtgtgtcttggtttttttgatcgctatcgcaaccgctgcaattatcgtttatgcctactctgaatcagcacaagaacga  26381200
                                                   <-----------GT1
                                                <---------YAB1
                                               --------->AHL20(2)
                                               --------->AHL20(1)
                                               <---------AHL20(1)
                                               <---------AHL20(2)
       <---------------------WRI1             --------->YAB1
   --------->MYB52(1)                        <---------YAB1
----->O2                                   <---------RVE1(1)
------O2<---------ANAC46                  <---------ARR11(3)
----->TGA1a                               --------->ARR14(2)
======================bZIP_DOF            <---------ARR14(2)               ------>ZmHOX2a(1)
------->GT1                             --------->LBD16                   --------->TOE2(3)   <-----
------ANAC46                          <---------LBD16              <-----------GT1   ------->GAMYB
------TGA1a---------->DOF2           ------->TEIL--------->YAB1 <---------GLK1(1) <-----------GT1
 
cgtgaaaaacggcgtaaagaacaacgtatagaaaactatgcaccggatattataataccatctatggatttcacagtccttaatttaaccgagactagtc  26381300
                                          ------>ZmHOX2a(1)
                                          --------->LBD16
                                     ------>ZmHOX2a(2)
                                    =============HOX2a_HOX2a
                                    <------ZmHOX2a(2)
                                   <---------ARR14(3)
                                   <-----------ARR10
                                   <---------ARR14(2)
                                   --------->ARR14(3)
                                   --------->ARR14(2)
                                   <---------GLK1(2)                             --------->YAB1
                                   --------->AGP1                    --------->CCA1(2)
                                   <---------ARR11(3)               --------->ARR14(2)             <
<---------ZAT6                     --------->ARR11(3)               <---------ARR14(2)     ---------
----------->GT1               <-----------HVH21                   ----------->ARR10   <----------DOF2
----ZAT6         <---------ZAT6   <---------CCA1(2)          ---------->DOF2  <----------DOF2   ----
 
ttagtgttaaatgggatttagtgatcaggcttccttcagatcttcctggttactatatgtgtctcaaaggagatttgcagactttcatactttacaaagg  26381400
                                                                                                <---
                                                                                              <-----
                                                                                             <------
                                                                                            <-------
                                 <---------DAG2                                       <---------MYB46(3)
                                 <----------DOF2                                    <---------MYB52(1)
 <---------YAB1          ----------->GT1                                          <---------ANAC46
-----------GT1    ------>ZmHOX2a(1)                                               <---------ANAC58
->DOF2           --------->TOE1(3)                    <----------DOF2             <---------ANAC58
----->ALFIN1     --------->TOE2(3)       <---------ICU4               <----------DOF2<---------TOE1(2)
 
tgttaccattgctaattcatccttagacaggttacactttttaaaaatttcaatactctttttttttttttttctttaactaatttcgtttgttcatata  26381500
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AGI:  At1g70020.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39330.1); contains InterPro domain Protein of unknown function DUF1163 (InterPro:IPR009544)
Range:  from: 26381033    to: 26382022    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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