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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------->
DOF2
--------->
At5g28300
----------->
GT1
<---------
ANAC46
<---------
YAB1
--------->
ZAT18
----------->
GT1
<---------
ZAT18
<---------
ANAC58
<---------
GLK1(2)
->
AHL20(1)
<---------
ANAC46
<---------
At5g28300
<----
--
AHL20(2)
<---------
ANAC58
<-----------
GT1
<---------
AHL20(2)
->
AHL20(2)
<---------
REM1(1)
---------->
DOF2
<---------
ARR11(3)
--------->
AHL20(2)
>
AHL20(2)
----------->
GT1
----------->
GT1
--------->
ARR11(3)
--------->
YAB1
tggtgcggtaaagaatggtaaaattgtagcgaggtgataatagaaagttgttaagaaacatctcaaattacagcatcttggccgataataaaactaatat
26380600
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<---------
AHL20(2)
<---------
ALFIN1
--------->
AHL20(2)
--------->
ZAT14
<---------
AHL20(2)
--------->
ZAT18
<------
<---------
ICU4
<---------
ANAC58
<---------
ZAT18
<---------
ZAT6
--------->
YAB1
---------->
ID1
--------->
ZAT2
--------->
LBD16
<---------
YAB1
<---------
YAB1
>>>>>>>
ZML2
<----------
DOF2
<---------
ZAT2
--------->
LBD16
-------
GT1
<---------
YAB1
<-----------
GT1
<----------
DOF2
<---------
ATHB12
---------->
DOF2
<------
actatgtttgatcatcatatgatttatttttcgttctagcctgcttctttgattcgtagccaaacaagctggagcactcccaaagtcccgagtcttaacg
26380700
<----
<----
---------->
DOF2
--------->
ZAT6
<------
ZmHOX2a(2)
<---------
TOE2(3)
--------->
ARR11(3)
<-----------
GT1
<---------
ARR11(3)
----------->
HVH21
<---------
ATHB12
------->
GAMYB
<-----------
GT1
<---------
MYB52(2)
<---------
TOE2(3)
<---------
HSFB2a(2)
--------->
YAB1
<----
<-----------
GT1
----------->
RAV1(1)
--------->
HSFB2a(2)
<-------
TEIL
--------->
MYB52(1)
---
TOE1(3)
--------->
MYB52(1)
------->
TEIL
------>
ZmHOX2a(1)
--------->
SPL7
------------>
CBF
---
TOE2(3)
<---------
DOF5.7(2)
---------->
DOF2
<----------
DOF2
<-----------
HVH21
--------->
WOX13(1)
ttttatggcccattaacgatctaaagcccaacataaagaacctatttctatcctttgagaagttttctctgtccgacgattcatagccaattaacgctaa
26380800
<---------
AHL20(1)
<---------
ARR11(3)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
AHL20(1)
-------->
HAHB4
--------->
ARR11(3)
--------->
ICU4
<---------
AHL20(2)
--------->
ANAC55(2)
<---------
AHL20(2)
<----------
DOF2
<---------
ARR11(3)
<---------
YAB1
<---------
YAB1
--------->
CCA1(1)
<-----------
GT1
--------------------->
WRI1
-----
YAB1
--------->
AHL20(2)
---------->
DOF2
--------->
GLK1(2)
<---------
AHL20(2)
<-------
-----
TOE1(3)
--------->
RVE1(1)
----------->
GT1
--------->
AHL20(2)
<-------
-----
TOE2(3)
--------->
TOE2(3)
---------->
DOF2
<---------
MYB59
<---------
AHL20(2)
--------
gattactatttgatttaatctaaaatatctttagcgaaaagaaagttatttaccaaaatctaaaaatttatatgtaattatcgaaatctttttaaaaaat
26380900
-------->
HAHB4
<---------
YAB1
--------->
ICU4
<---------
AHL20(2)
--------->
TOE2(3)
<---------
ANAC55(2)
<----------
DOF2
>>>>>>>>>
MYB98
--------
----------->
GT1
------------>
CBF
<----------
DOF2
--------->
CCA1(2)
<-------
--------->
ANAC55(2)
--------->
YAB1
------>
MYB46(1)
--------->
TOE1(3)
<---------
ANAC55(2)
---
--
AHL20(1)
<---------
YAB1
------>
MYB83
--------->
TOE2(3)
<-------
TEIL
<-------
TEIL
--
AHL20(2)
--------->
ARR11(3)
-------->
P
<-----------
GT1
<---------------
AtSPL8
-----
->
AHL20(2)
<---------
ARR11(3)
<-----------
GT1
--------->
YAB1
---------->
DOF2
<-----------
RAV1(1)
ttgatatgtaattatcgaaatcttcttataagaacaatataccaactcttttctttaataaccctaacaaaaaaaagatacataaatctggtgcatatac
26381000
-----
--------->
ANAC46
<----------
DOF2
------
--------->
ARR14(2)
<---------
DAG2
------
->
ARR14(2)
--------->
MYB52(1)
<---------
ALFIN1
------
--
ARR14(2)
--------->
YAB1
--------->
ARR14(2)
--------->
ANAC46
------>
ANAC46
------------>
CBF
----------->
GT1
------>
ZmHOX2a(1)
--------->
REM1(1)
---->
ANAC46
<---------
CCA1(2)
<---------
YAB1
--------->
YAB1
--------->
ANAC46
--------->
ZAT6
acatctctctatccgtctctctctgggtttca
atggattatgaaaacggagaaataatagctcctaaatccaccactttatgggatagacttacaccacg
26381100
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
--------->
ALFIN1
------->
MYC2
<-------
MYC2
--------->
TGA1a
==========================================
MYC_MYB
--------->
ANAC55(2)
----
<---------
ANAC55(2)
<---
<---------
ANAC58
----
<---------
ANAC46
====
--------->
DAG2
<-------
MYC3
<---------
TOE2(3)
----
========================
bZIP_DOF
--------->
YAB1
<---
---------->
DOF2
------->
MYC3
--------->
ATHB51
--------->
ANAC58
------>
RAV1(1)
<---------
TGA1a
--------->
At4g35610
--------->
ANAC58
--->
ANAC58
<---------
O2
------->
GAMYB
--------->
At4g35610
--->
ANAC46
<---------
ANAC58
--------->
MYB46(3)
<---------
At4g35610
--->
ANAC58
--------->
O2
------>
ZmHOX2a(2)
--------->
ICU4
--------->
YAB1
<---
acaaaaaaagtatgtgttcacgtgtgtcttggtttttttgatcgctatcgcaaccgctgcaattatcgtttatgcctactctgaatcagcacaagaacga
26381200
<-----------
GT1
<---------
YAB1
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(1)
<---------
AHL20(2)
<---------------------
WRI1
--------->
YAB1
--------->
MYB52(1)
<---------
YAB1
----->
O2
<---------
RVE1(1)
------
O2
<---------
ANAC46
<---------
ARR11(3)
----->
TGA1a
--------->
ARR14(2)
======================
bZIP_DOF
<---------
ARR14(2)
------>
ZmHOX2a(1)
------->
GT1
--------->
LBD16
--------->
TOE2(3)
<-----
------
ANAC46
<---------
LBD16
<-----------
GT1
------->
GAMYB
------
TGA1a
---------->
DOF2
------->
TEIL
--------->
YAB1
<---------
GLK1(1)
<-----------
GT1
cgtgaaaaacggcgtaaagaacaacgtatagaaaactatgcaccggatattataataccatctatggatttcacagtccttaatttaaccgagactagtc
26381300
------>
ZmHOX2a(1)
--------->
LBD16
------>
ZmHOX2a(2)
=============
HOX2a_HOX2a
<------
ZmHOX2a(2)
<---------
ARR14(3)
<-----------
ARR10
<---------
ARR14(2)
--------->
ARR14(3)
--------->
ARR14(2)
<---------
GLK1(2)
--------->
YAB1
--------->
AGP1
--------->
CCA1(2)
<---------
ARR11(3)
--------->
ARR14(2)
<
<---------
ZAT6
--------->
ARR11(3)
<---------
ARR14(2)
---------
----------->
GT1
<-----------
HVH21
----------->
ARR10
<----------
DOF2
----
ZAT6
<---------
ZAT6
<---------
CCA1(2)
---------->
DOF2
<----------
DOF2
----
ttagtgttaaatgggatttagtgatcaggcttccttcagatcttcctggttactatatgtgtctcaaaggagatttgcagactttcatactttacaaagg
26381400
<---
<-----
<------
<-------
<---------
DAG2
<---------
MYB46(3)
<----------
DOF2
<---------
MYB52(1)
<---------
YAB1
----------->
GT1
<---------
ANAC46
-----------
GT1
------>
ZmHOX2a(1)
<---------
ANAC58
->
DOF2
--------->
TOE1(3)
<----------
DOF2
<---------
ANAC58
----->
ALFIN1
--------->
TOE2(3)
<---------
ICU4
<----------
DOF2
<---------
TOE1(2)
tgttaccattgctaattcatccttagacag
gttacactttttaaaaatttcaatactctttttttttttttttctttaactaatttcgtttgttcatata
26381500
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AGI:
At1g70020.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39330.1); contains InterPro domain Protein of unknown function DUF1163 (InterPro:IPR009544)
Range:
from: 26381033
to: 26382022
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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