Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->GLK1(2)                                                                         --------->ARR14(2)  --------                ------->MYC4                                             <---------ARR14(2)<---------ALFIN1                ------->MYC2                                             <---------GLK1(2) --------->AtMYB61                <-------MYC3                                           ----------->ARR10--------->ANAC46                <-------MYC2    <---------TOE2(3)                  --------->ANAC58     <---------ALFIN1                ------->MYC3    <---------TOE2(2)                  --------->ANAC46<---------ARR11(3)    <---------YAB1              <---------TOE1(2)                  --------->ANAC58--------->ARR11(3) -------->ARR14(2) <---------AtLEC2 ---------->DOF2             --------->ARR14(2) <-----------ARR10 ---------ARR14(2)<-------TEIL<---------MYB52(1)                <---------ARR14(2)<---------CCA1(2)   ccgattttgatggagacatgtgcatgtattctcttaggtatagcacaagattactcgcattcgccaaatacgctagattctctaatatctccaccacttc  26303700                        --------->YAB1                       <---------ATHB12                              --------->YAB1          --------->AHL20(1)               --------->GLK1(2)  --------->ALFIN1          <---------AHL20(1)     ------>ZmHOX2a(2)      <---------YAB1  ---------->DOF2         --------->AHL20(2)  <---------ATHB12           --------->AHL20(2)  <----------ID1     --------->WOX13(1)   <---------GLK1(2)   <---------ANAC46      <-------TEIL ->bZIP60(2)      ------->TEIL--------->YAB1            <---------AHL20(2)    ---------->DOF2  ------   ataagagacaaatatatatgaatcaatcacaatgatccattagagaatcgttcttaatataaatgtgtggatgataaagaaaaagatgcattaagagaat  26303800                                                        ------>NtERF2                                              --------->DEAR3(1)                                              <---------ANAC46                                             <------NtERF2                                             --------->ATERF1(1)                                            <---------RAP2.3(1)                                            <---------ERF1                                            <---------ATERF1(1)                                            <---------DEAR4(2)                <---------ZAT14                                            <---------ORA47(2)             <---------At4g35610                                            ------>NtERF2<------NtERF2   --------->ANAC46                                           <---------DEAR3(1)--------->REM1(2)<---------ZAT2                                           <---------RAP2.6(2)          <---------At5g28300                                           <---------ANAC46 ----------->HVH21 --------->At4g35610                                           --------->ATERF1(2)  ------>NtERF2 <---------At4g35610                                           <---------RAP2.3(3) <---------RAP2.6(2)                                          <---------ABI4(1)<-----------HVH21<---------DEAR3(1)                                    ---------->DOF2 --------->ANAC58    <---------LBD16                                  --------->ANAC58  --------->ANAC46 <-----------HVH21   --------->At5g28300            --------->ANAC58  --------->ANAC58<----------DOF2                --  ----------->GT1           <---------MYB59<---------RAP2.3(2)--------->RAP2.6(3)                  <- --->GLK1(2)           <---------MYB52(2) --------->ATERF1(1)--------->MYB52(1)                   <--   cgaggggtaaatttggaattttgaaactgacctaagacgaaagaggcggcgagcatgccaccgtgacggcctttcacggctgctctgtttctccaatcgg  26303900                                                                                                -----                                                                                             --------                                                                                         ------------                                                                                         --------->HSFB2a(2)                                                                                         <-----------                                                                                        -------------                                         --------->YAB1                                 <------------                                         --------->AHL20(2)                             <------------                                         <---------AHL20(2)                             <------------ ------->ATERF1(1)                    --------->YAB1                                    <------------ -----NtERF2                       ------>ZmHOX2a(1)                      ---------->DOF2<---------HSFB2a(2) -------SPL7                <---------ALFIN1     ---------->DOF2  <----------DOF2       -------------   cgtagccttcccatcttgagacctcttcttccacttcctgtaataatatggcaaagaacaaaacaagactttgagaaaaagacatatatttctataaaag  26304000 --------->YAB1 ------>GT1 -->DOF2 --->AGL15                                                    ------>MYB83 ----AGL15                                                    ------>MYB46(1) ---->AGL3                                                   --------->ANAC46 -----AGL1                                                  --------->MYB46(3) -----AGL3          <---------ANAC58                       --------->DEAR3(2)                     --- -----AGL2          <---------ANAC46                  --------->HSFB2a(2)                      <----- -----AG            <---------ANAC58             --------->HSFC1(2)            <----------DOF2 <----- ---->AGL2     --------->ATHB12 ----------->GT1  <---------HSFC1(2)        <----------DOF2 <---------   gaaacatcatcaaatattgatttcttgaacgatgaagaaaataatgtgagaagcttcaagaacccaccattctctctctttctttctctcaaactttgag  26304100       --------->CCA1(2)                                                                         <---      <---------ARR11(3)                                           ---------->DOF2               ----   <------ZmHOX2a(1)                                              <---------AHL20(2)             ---- ------>ALFIN1   ----------->GT1                                  --------->AHL20(2)          <------ZmHOX2a(1) ----TOE2(3)    <---------TOE2(3)                               <-----------TBP         <------------CBF ----TOE1(3)  ---------->DOF2                             <---------LBD16  <------ZmHOX2a(1)<-------- -DOF2--------->ARR11(3)           *TSS ---------->DOF2   --------->At4g35610   <------ZmHOX2a(1)<---   gtagaggagatataaaaaaaggtttttatgaaatataagagtgaaagtgagaagggtattagcggaatttaaagagaggagaggagaagggattgaggaa  26304200        <---------ANAC58        <---------ANAC46        <---------ANAC58    <------------CBF ------------>CBF ------HSFB2a(1)                         <---------YAB1                  <----------DOF2 ----->HSFC1(2)                --------->PCF2                  <---------REM1(1) ----->HSFB2a(1)               <---------ZAT18         --------->bZIP60(1)                    <------ -TOE2(3)                --------->GLK1(2)  <---------YAB1  <-----------RAV1(1)          <------ZmHOX2a(1) ------HSFC1(2)  ---------->DOF2     <----------DOF2   <---------bZIP60(1)      <---------------AGL15   gggtccaattgggtgagaagaaagaagaatttgggccctctttattattagaaaatgacttcatgttgtagttttctttatgctcttcttaggaaataac  26304300                                                            <---------ARR11(3)                                                            --------->ARR11(3)                            <---------DAG2              --------->YAB1                            <----------DOF2     <---------ZAT18                                   <--              --------->HSFB2a(2)               --------->ZAT18  <---------ICU4                  ----              <---------HSFB2a(2)   --------------------->WRI1  --------->AHL20(2)     ----------->GT1 -----GT1   ------>ZmHOX2a(1)       <----------DOF2  ---------->DOF2             ---------->DOF2 <---   attgttttcttctcctctagagaaaactagctttatttctttgtttttagggcactaaagatgatattaattccaagaatttataaagctagtaatatag  26304400                    <---------ICU4                    --------->YAB1                                                   <---------TOE2(3)      ---------->DOF2 <---------YAB1                                               --------->YAB1 -------MYB46(3)   <---------ATHB12                                               <---------ATHB12 ----->ALFIN1    --------->WOX13(1)    --------->ANAC55(2)                      --------->WOX13(1) ------AtMYB61 <---------ATHB12    <----------DOF2                   --------->GLK1(1) --------->TOE2(2)   tggtggaataaagactaatcaatcatgtttgttttccctttacttaatatgcaagttgattttgaaatggggtttccaataccaattaacatatgagaat  26304500                                                        <---------ANAC58                                                        <---------ANAC58                                                     <---------WOX13(1)                                                    <---------ANAC58          <---------YAB1                                                    <---------ANAC58          <---------AHL20(2)                                                   --------->ATHB12        --------->AHL20(2)                               ----------->GT1   <---------WOX13(1)        <---------AHL20(1)                <---------------AGL15          <------ZmHOX2a(1)           --------->AHL20(1)          <---------YAB1      <---------ZAT6 <---------TOE1(3)             <---------AHL20(2)     ---------->ID1<---------REM1(2)         <---------TOE2(3)            --------->AHL20(2)   tgattttgttctattattctctacaaggtatagtggtaacaaagtttaaggattgattgcatatcgattactcacattatattattcgttcacatttaca  26304600  Previous    Next  AGI:  At1g69850.1    Description:  ATNRT1:2 (NITRATE TRANSPORTER 1:2); calcium ion binding / transporter. similar to nitrate transporter, putative [Arabidopsis thaliana] (TAIR:AT1G27040.1); similar to nitrate transporter, putative [Arabidopsis thaliana] (TAIR:AT1G27040.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO41029.1); similar to Os06g0581000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057937.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 26300339    to: 26304135    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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