Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                              <------                                           ------->GAMYB                                     --------                                <---------AHL20(2)                                <-----------GT1                                --------->AHL20(2)                            <---------ARR11(3)  <-----------GT1           <---------AHL20(2)                                --------->ARR11(3) --------->TOE1(2)          --------->AHL20(2)                          --------->DAG2 --------->TOE2(3) -----WRKY38(1)       --------->AHL20(2)<-----------GT1                ---------->DOF2--------->ANAC46 --AGL1    <---------AHL20(2)  <---------AHL20(2)<---------AHL20(2)  <---------------AGL15   <-------   aattctacgatttttaatctgcaattacatttatttattttttaaccccattttttttgttctatctccaactaaaagtagatattacacctcaatatca  26262200                                                                       --------->ANAC46                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                     --------->AtMYB61                                                                     ----------->RAV1(1)                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                    --------->ANAC46                                                                 --------->ZAT18                                           --------->AHL20(2)    <---------ZAT18                                           <---------AHL20(1)    <---------ZAT14                                           <---------AHL20(2)    --------->ZAT14  ---------->DOF2                <---------At4g35610           <---------At4g35610 --->YAB1                        --------->At4g35610     ------->TEIL<---------ALFIN1     ---------->DOF2 ---YAB1                   <---------AtMYB61    <---------AHL20(2) ----------->RAV1(1)   ------>ZmHOX2a(1) ->ARR11(3)           <-----------RAV1(1)  --------->AHL20(1)  --------->At4g35610      --------->TOE2(3) --ARR11(3)        <----------DOF2        --------->AHL20(2) ---------->CDC5 --------->YAB1      ----   tattcaaagttcaaactgtgtcttttgttgtggtctgatgcaaattttatttatagatgaatctcagcgcaccacacaataatccactatcctaaagact  26262300                                       <----------DOF2                                    <---------ALFIN1                                  ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)                      --------->ARR11(3)                         --------->AHL20(2)                             <---------ARR11(3)                         --------->AHL20(1)                            --------->CCA1(1)                         <---------AHL20(2) <---------ANAC58           --------->RVE1(1)                        --------->AHL20(2)  <---------ANAC58----------->GT1                        <---------AHL20(2)  <---------ANAC46<---------MYB46(3)                  --------->At5g28300  <---------DAG2 ----------->RAV1(1)         <----------TaMYB80      --------->PCF2       <<<<<<<<<<<<<<<<<LFY ----------->GT1 ----------->GT1--------->ARR14(2)--------->ANAC58 <---------AHL20(2) ------>DOF2  <---------LBD16   <---------ARR14(2)--------->ANAC58 --------->AHL20(2)   aaagagtaagtatataccagggtaaattaaattggatcccacttttacttggaagccaacaatggttaaaaaaatatctatctataaacgattgtcgaaa  26262400                       --------->YAB1                       <---------AHL20(2)                      <---------YAB1                    --------->ATHB51                    --------->YAB1                    <--------ATHB1                    -------->HAHB4                    <---------ICU4                    <--------HAHB4         --------->TOE2(3)                   --------->ICU4        <---------TOE1(3)                            <---------AHL20(2)                   --------->AHL20(2)   --------->MYB52(1)                        <---------AHL20(2)                   <---------YAB1     <----------DOF2                            <---------YAB1             ----------->GT1         <---------ANAC58                    ----------->GT1      <---------AHL20(2)        <----------DOF2          <---------TOE1(3)      <---------AHL20(2)     --------->AHL20(2)--------->AHL20(2)<---------TOE2(3)             ------>ZmHOX2a(2) ----------->GT1   <---------ATHB51  <---------ANAC58    <---------TOE2(3)    <---------YAB1<--------   atgaagataaaattggagttaataattatatatactttggcttaacgtaaatgaagtttaagcttgtatttgatcgtgttatttttattttttttaacga  26262500                                                                                                    <                                                                                                    -               <---------CCA1(2)                                                                    -             <---------ANAC58                                                                       <             <---------ANAC58                                                                      --         <---------ANAC58                                                                          <-         <---------ANAC58      <---------At4g35610                                ---------->DOF2  <-     <------------CBF          --------->At4g35610                          --------->ANAC58       --  ------------>CBF             --------->ZAT2                               --------->ANAC58      --- --------->GLK1(2) <----------DOF2         ------>ZmHOX2a(1)                ----------->GT1  -------- ---GT1  <---------ANAC46      <---------ZAT2                        ----------->TBP         <-------   gagaatcaattgagtgcgtctctttctcttctcagctcatatgtcctctctctctctctctcagcctttctatataaaacgaaataaagaagaaattaaa  26262600  *TSS ---------HSFB2a(2) -------->HSFB2a(2) -------------->AGL15                                      <------------------------ANAC81 ---------------AGL15                                     ------>ZmHOX2a(1) --------------->AGL2                                  ---------->ID1 ----------------AGL1                                  <-----------GT1 ----------------AGL2                                 <-----------GT1  <-----------GT1 --------------->AGL1          <-----------GT1     <------------------------ANAC81               ---- ------>MYB52(1)         <-------TEIL             <------------------------ANAC81             ------- ->AHL20(2)            --------->ARR14(2)     <----------DOF2     <----------DOF2             ------- --AHL20(2)            <---------ARR14(2)    <------------------------ANAC81                  -------   taccagaagtggtatagtctaggccgatacatttcactatctctctctcttttgtttttcctcttcttctttttttccatttgatttcaaactctcacac  26262700                                                                                             --------                                                                                       --------->ANAC46                                                                                       --------->ANAC58 <---------ARR11(3)             <----------DOF2                                        --------->ANAC58 --------->ARR11(3)       <---------ICU4                                         --------->ARR11(3) ------>DOF2             <---------YAB1                                          <---------ARR11(3) -->ANAC58             --------->YAB1        <---------WOX13(1)              --------->AtMYB61 -->ANAC46            <---------YAB1       --------->ATHB12     ---------->DOF2 <---------GLK1(2) -->ANAC58        --------->ARR11(3)<----------ID1    ----------->GT1    --------->MYB46(3)--------->MYB52(1)   aaagagcttcagatttataagaccatgataatggctttaagacaaagattggcaagaagaaaaaactaaagagaaacgaccaaaatctcaagcaaacagt  26262800                                     --------->YAB1                                     <---------ICU4                                     -------->HAHB4                                    <---------ATHB51                                    --------->ICU4                                  --------->YAB1                               ----------->GT1                             <---------ANAC46        ---------->ID1                                --                             <---------ANAC58       <-----------GT1                               ---                             <---------ANAC58   <----------DOF2         =============================      <-----------RAV1(1)<---------ARR11(3)  --------->ARR11(3)         ------>ZmHOX2a(2)   <-------- ->ZAT6<-------GAMYB     --------->ARR11(3)  <---------ARR11(3)     <---------YAB1          ---------   actaacttctgttgcaaaacagaagaagatgtcttgtaataatggaatgtcttttttcccttcaaatttcatgatccaaacctcttacgaagatgatcat  26262900                                                            ----------->GT1                                                      ------>ZmHOX2a(2)                                                     --------->GLK1(1)                                                     <---------GLK1(1)                                                     <------ZmHOX2a(2)                                                    <---------ARR14(2)                                                    <---------ARR14(3)                                                    --------->ARR14(3)                                                    <-----------ARR10    --------->WOX13(1)                              <---------ARR11(3)                       ------>ZmHOX2a(1) ---->ZmHOX2a(1)                                    --------->ARR14(2)              --------->ANAC58 ------>TOE2(3)        ------>ZmHOX2a(1)            <---------AGP1                  --------->ANAC46 =====HOX2a_HOX2a      =====================================HOX2a_HOX2a             --------->ANAC58 -ARR11(3)            <---------ALFIN1              --------->ARR11(3)              <---------ALFIN1 >ARR11(3)  <---------CCA1(2)                 --------->TOE2(3)      <-------TEIL <---------ALFIN1   cctcatcaatctccatctcttgctcctcttcttccttcttgctctctacctcaagatctccatggtatatatacataaacttccacacacatctcctctg  26263000                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                                    <---------GLK1(1)                                                <---------ANAC58    --------->GLK1(1)                                                <---------ANAC58   --------->ARR11(3)                                            --------->GLK1(1)      <---------ARR14(2)                                            <---------GLK1(1)      <---------ARR11(3)                                           <---------ARR14(2)      --------->ARR14(2)                                           --------->ARR14(2)      --------->ARR14(3) <---------ANAC46                                          =================================HOX2a_HOX2a----------->GT1                         <---------ZAT14  ==================================HOX2a_HOX2a <---------YAB1                         --------->ZAT14  <------ZmHOX2a(1)       --------->GLK1(1) <-------GAMYB            <----------DOF2            <---------LBD16            <---------GLK1(1)--------->ALFIN1   ttttctctctatctctttctaatgctctgttctgttctgtttcaggatttgcttcgtttctaggtaagagatctccaatggaagggtgttgtgatttaga  26263100  Previous    Next  AGI:  At1g69780.1    Description:  ATHB13; DNA binding / transcription factor. Identical to Homeobox-leucine zipper protein ATHB-13 (ATHB-13) [Arabidopsis Thaliana] (GB:Q8LC03;GB:Q9S7A4); similar to ATHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G26960.1); similar to putative DNA-binding protein [Solanum demissum] (GB:AAT40488.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain Leucine zipper, homeobox-asso Range:  from: 26262602    to: 26264414    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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