Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <------MYB46(1)              <------MYB83             <---------TOE1(2)             <---------TOE2(2)                                                    --------->LBD16           --------->TOE1(2)                                                     --------->ANAC46         <---------TOE1(3)                                 --------->ATHB12  -------->P         <---------TOE2(3)                                <---------YAB1     ------>MYB46(1)        <---------DOF5.7(2)                    <---------AtLEC2              ------>MYB83<-------TEIL --------->RAP2.6(2)  <----------DOF2 --------->ZAT14  --------->ICU4   <---------WRKY18(1) -->ETT(2) --------->TOE2(2)      --------->ZAT6  ----------->GT1      --------->WRKY38(1)--------->ANAC46   cagcctccattaacgtaggtatggctatattgtcttccactagactaatgcatggtcaaaatgatagagacgtttgaccaactccgaaacatacacaatc  26239600                                    ------>ZmHOX2a(1)                                  ------>ZmHOX2a(2)                                  ===============HOX2a_HOX2a                           --------->ARR14(2)                            <---------ARR11(3)                         --------->LBD16                                 --------->ARR11(3)                       <---------LBD16                                  --------->YAB1                   <---------ARR11(3)     ------>ZmHOX2a(1)            --------->ICU4            <---             <----------ID1------->TEIL  <---------MYB59     --------->YAB1       <------ZmHOX2a(2)--             ----------->GT1----------->RAV1(2)             <---------YAB1<------ZmHOX2a(2)     <----           ---------->DOF2 <---------ARR14(2)           <----------DOF2----------->ARR10<----------DOF2 --------->YAB1    --------->ARR11(3)   ----------------->AGL1       ---------->DOF2  <---------DAG2-   caaacaaaatcaaaaaagaaaaatctccggacctgatcctattcctaattcagtccgtctttatcattttgcaaagatcatcggatcactctttgttata  26239700                   --------->ANAC46         --------------->AGL15     <------ZmHOX2a(2)         <-----------GT1 --------->ALFIN1------->GAMYB<-----------GT1                                                     --- ------At5g28300 ----------->RAV1(1)       ----------------->AGL1                      ---------->ID1 ----->GAMYB     --------->TOE2(3)         ----------------->AG                    --------->CCA1(2) -------GT1   --------->WOX13(1)           ----------------->AGL3     <---------AHL20(2)          --- -------->LBD16 --------->MYB46(3)    --------->ANAC55(2)             --------->AHL20(2)  <------NtERF2   accgtggatcaattgtcaaccacaaaactgtttttccttcacgtttccaaattagttagcaactctctaagtttaattaagagagatttggcctcattaa  26239800                 ------>ZmHOX2a(2)                  --------->ATHB51                <------ZmHOX2a(2)         --------->CCA1(2)                              ------->GAMYB               --------->ARR14(2)         --------->ALFIN1                            --------->MYB52(1)   <---------ARR11(3)           ------->TEIL       --------->ICU4             --------->At4g35610   --------->ARR11(3)     <-------TEIL <---------TOE1(2)                      <---------ZAT2      <-- ------>TOE2(3)------->TEIL  --------->ANAC46   ----------------->AGL1        --------->ZAT2  <------ ------>TOE1(3)<---------ARR14(2)      <---------TOE2(2)                 ---------->DOF2 ----------->HVH21   ccatagatattagaatggatccagtaagtacatgaaactcgaaggtatgggccattatgggcctgaaccaaaaatgaaagagctgggataactgaccttt  26239900                                                                               *TSS                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                     ------>ZmHOX2a(1)        <-----------ARR10                                                     =====================HOX2a_HOX2a                                                <---------GLK1(1)            <---------CCA1(2) --------DOF2                             --------->YAB1           <------ZmHOX2a(2) ----DOF2              <---------ALFIN1  <---------YAB1            <---------ATHB12   ctttttgacatttgagcatcgagcctcacagtgcaagagttctattatagaactcctatactaaaaccgatcaagaggcaaatctcccaactcttccaac  26240000                        <---------ANAC58                        <---------ANAC46                        <---------ANAC58            <----------DOF2                       <-------TEIL           --------->ATHB12                    <---------At4g35610      <---------YAB1                                       ---                 <---------ZAT14           --------->YAB1                       --------->HSFB2a(2) <            <---------YAB1                 <---------ICU4                       <---------HSFB2a(2) -          --------->CCA1(2)               --------->ICU4       <-----------GT1 <---------LBD16   <---  --------->ANAC46<-----------RAV1(2)  <---------YAB1    <----------DOF2  --------->GLK1(1)      ----   ttccaaggctcgatatgagtacaggtgcgttttcttctcttctcattatgatttcttttcttttttttctattccgatttctctggaattgaagatgtga  26240100   <---------WOX13(1)               <---------GLK1(2) --------->ATHB12                   --------->ARR14(2)                                           <--- ------>YAB1                   --------->MYB52(1)              <---------ICU4                    <--- ---------YAB1                <-----------GT1        --------->HSFB2a(2)                         ---- -------->ICU4          --------->TOE1(3)            <---------HSFB2a(2)            --------->At4g35610 ------YAB1             --------->TOE2(3)         <----------DOF2                   <---------At4g35610 ----->ICU4   <---------WOX13(1)    <---------ARR14(2)        <---------ATHB12 --------->YAB1 <------   tgatgattgaaattggattgaaatcaccttaaataccagatttgtgagatagcttttagaactaatcactgcaaattgatatcatcatctgcaattgtgt  26240200             <---------HSFB2a(2)             --------->LBD16             --------->HSFB2a(2)    --------->ATHB12                                            --------->MYB52(1)    <---------YAB1   --------->ICU4        <---------YAB1                       <---------ARR11(3)<------MYB83   <---------YAB1       <----------DOF2                <----------ID1           <------MYB46(1) ------------AtSPL3    <---------ICU4                  <----------ARF1          ----------->GT1 ------------AtSPL8<---------AHL20(2)            <-----------RAV1(1)           --------->MYB59 --->TEIL    ------>ZmHOX2a(1)                <-----------RAV1(1)      <---------ANAC58 ---ANAC46  <---------LBD16      ----------->GT1 <---------MYB46(3)    <---------ANAC58 ----------->GT1   atgtactgattagtcctggaattaatctttatagccagtaaattctctatgttgttggagacaagataactgtgcttgagtttggtttattagtaaaacc  26240300                    <-------TEIL                  <---------CCA1(2)                <---------TOE2(3)            <-----------RAV1(1)              --------->ANAC46              ---------->DOF2     --------->GLK1(1)------->TEIL   --------->AHL20(2)        ---------         <------ZmHOX2a(2)        <---------GLK1(1)--------->ARR11(3) --------->AHL20(2) --------->YAB1        <---------ARR11(3)<----------DOF2   <---------TOE2(3)     <---------AHL20(2) --------->TOE2(3)   caaaaccctagatcaacaaaggttcatactttatagatttcccactaatgttgtatcttgttttgtatttaatcaaatacactacaacctatattgattt  26240400                                                                              ------->PIF5                                                                              <-------PIF5                                   <---------YAB1                            <---------At4g35610                                 --------->ZAT6                              --------->At4g35610                              --------->YAB1                                 <------MYB46(1)                              <---------ICU4                                 <------MYB83                             --------->ICU4                                  <---------ZAT2                             <---------YAB1                                  --------->ZAT2                           <---------ICU4                                   --------->MYB55(2)                           --------->YAB1                                   --------->MYB111(1)                          --------->ICU4--------->DAG2          <---------ANAC58                          <---------ATHB12                      <---------ANAC58             <------ZmHOX2a(1)          <------ZmHOX2a(1)-------->HAHB4                <---------MYB52(1) <---------MYB46(3)         ----------->GT1 <---------TOE2(3)       ------>ZmHOX2a(2) <-------TEIL--------->ALFIN1 >ATHB12----------->GT1 --------->YAB1 ---------->DOF2 ----------->GT1     <-----------RAV1(2)   agttagaagagaggaaaaacaggttttaatgatgatcactataaagttcgatctgaatcgttactcgcgttcatggggcaggtggagcatttggaggaaa  26240500  Previous    Next  AGI:  At1g69750.1    Description:  cox19 family protein. similar to cox19 family protein [Arabidopsis thaliana] (TAIR:AT1G66590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45854.1); contains InterPro domain CHCH (InterPro:IPR010625) Range:  from: 26239979    to: 26241164    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version