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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
ATHB12
<---------
ICU4
<--------
HAHB4
<---------
ATHB12
--------->
ICU4
<---------
ARR11(3)
--------->
ARR11(3)
--------->
KAN4(2)
--------->
ARR14(2)
<----------
TaMYB80
--------->
HSFB2a(1)
<---------
HSFB2a(1)
<---------
GLK1(1)
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
TOE2(3)
<---------
KAN4(1)
--------->
ANAC58
--------->
KAN4(1)
--------->
LBD16
--------->
ANAC58
--------->
GLK1(1)
-------
ARR11(3)
<---------
ANAC55(2)
<---------
KAN4(2)
--->
TOE2(3)
------->
TEIL
--------->
ANAC55(2)
---------->
TaMYB80
-->
RAV1(1)
<---------
ZAT2
----------->
GT1
<-------
TEIL
--------->
TOE2(3)
tatctctccagagatgaagtccaagctcatgaacatgagttttcttagtagtagaaacgtaagtacgatccatatacatgagaatatccctaatcatttg
26207700
--------->
KAN4(2)
<---------
ICU4
<---------
YAB1
--------->
At4g35610
<---------
ARR11(3)
<---------
At4g35610
--------->
ARR11(3)
<----------
DOF2
--------->
YAB1
<---------
ARR11(3)
--------->
ICU4
--------->
ANAC58
<---------
At4g35610
--------->
ARR11(3)
<---------
YAB1
--------->
ANAC58
------>
ZmHOX2a(1)
<---------
CCA1(2)
<----------
DOF2
------>
ZmHOX2a(1)
<---------
ALFIN1
--------->
ANAC55(2)
caacgctttgttatgatcattccatttcctattaagcaattctaaaaatgctcctccttgagcttcttcaatagacttacatatctctttgagatgaaat
26207800
<----------
ID1
----------->
GT1
--------->
ARR14(2)
--------->
ZAT18
--------->
YAB1
<---------
ARR14(2)
--------->
At4g35610
----------->
GT1
<-----------
GT1
<---------
ANAC58
<---------
At4g35610
<---------
ZAT6
---------->
DOF2
<---------
ANAC58
--------->
AtMYB61
gtcatagtggtaacaagtccagtataaagcttatcaccatacttatgtagaaccatgttgtatgcgttt
ctgaaataagcgaccaaagtttagcagaaca
26207900
--------->
ARR11(3)
<---------
ARR11(3)
------->
TEIL
--------->
GLK1(1)
---------->
DOF2
---------->
DOF2
<---------
ZAT18
<---------
YAB1
<
--------->
YAB1
--------->
ZAT18
<---------
ANAC58
------
------->
TEIL
--------->
ALFIN1
<---------
ANAC58
<--------
--------->
CCA1(2)
--------------->
AtSPL8
--------->
ZAT18
----------->
GT1
<
acaacaacaagagatgaatcaaagtgaaatctatggaagtgtac
ctgtaaagctcttcgaaactgagaccactagcgttgtgattgtaaatctcatgaat
26208000
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
HSFB2a(1)
<---------
HSFB2a(1)
--------->
ARR14(2)
<---------
ARR11(3)
<---------
YAB1
<-----------
ARR10
------>
NtERF2
<---------
HSFC1(2)
<---------
ARR14(2)
--------->
MYB46(3)
--------->
HSFC1(2)
--------->
ARR11(3)
<---------
WRKY12
<---------
HSFB2a(1)
---------
TOE1(2)
<------
ZmHOX2a(2)
<---------
ANAC46
--------->
HSFB2a(1)
<-
->
TEIL
<---------
ARR14(3)
<---------
ARR14(2)
<---------
ANAC58
----------->
GT1
<---------
At4g35610
-
YAB1
--------->
ARR14(3)
--------->
ARR14(2)
<---------
ANAC58
<---------
HSFB2a(2)
---
---------
TOE2(2)
<---------
ANAC46
------->
GAMYB
<----------
DOF2
--------->
HSFB2a(2)
<--
cgcatgttcaaggatcttccaagttttatcggcgtattttggatcaacgacgactcgttgcttaaacgcttcaatctggaaatttctcttcttctgatta
26208100
<---------
ICU4
--------->
YAB1
--------->
ICU4
<---------
YAB1
--------->
YAB1
<---------
ICU4
----------->
GT1
<---------
ATHB12
----------->
GT1
<---------
AHL20(2)
--------->
GLK1(2)
<------
ZmHOX2a(1)
--------
ICU4
------->
TEIL
----------->
GT1
<---------
HSFB2a(2)
------------>
AGL15
--------->
DAG2
---------->
DOF2
--------->
HSFB2a(2)
-------------
AGL15
---------->
DOF2
--------->
At4g35610
<---------
LBD16
<---------
YAB1
ctcat
tgttgaaaatgaaactgaaccaaaaagtaagagagaccacaaaatcagttcaaaggaaaatcggaaaaaattcgaggaataaatcatgatgatag
26208200
-
<
<---------
TOE1(2)
---
--------->
YAB1
<---
--------->
TOE2(3)
----
--------->
TOE1(2)
------
--------->
TOE1(3)
--------->
YAB1
<---------
TOE2(3)
<------
--------->
ATHB12
--------->
WOX13(1)
<---------
TOE1(3)
<---------
TOE1(3)
-------
--------->
ICU4
------------>
CBF
<---------
MYB46(3)
<---------
TOE2(3)
---------
<------------
CBF
<------
ZmHOX2a(2)
<------------
CBF
--------->
GLK1(2)
--------->
ICU4
aagaattgattaaaaccttagatcaatcgtagaatcagaaattggaggttagggtttgtgatgaagaatttgaaggttgaagtcttgaagacgatgatga
26208300
<---------
YAB1
<---------
YAB1
--------->
YAB1
--------->
ICU4
<---------
ICU4
--------->
YAB1
--------->
ICU4
<---------
WOX13(1)
<---------
YAB1
--------->
ATHB12
--------->
TOE2(3)
-------->
ICU4
<---------
ARR11(3)
---------
YAB1
<---------
AHL20(2)
------>
YAB1
--------->
AHL20(2)
------
YAB1
--------->
AHL20(1)
----->
ICU4
--------->
At4g35610
--------->
ARR11(3)
--->
YAB1
<---------
LBD16
<---------
AHL20(2)
--------->
ZAT6
---
YAB1
<---------
YAB1
<---------
AHL20(2)
<---------
ARR11(3)
-->
ICU4
--------->
YAB1
--------->
AHL20(2)
<---------
YAB1
>
YAB1
<---------
TOE2(3)
--------->
AHL20(2)
<---------
MYB46(3)
----------->
GT1
tgatgattgatgatgatagcggaagaaaaaaaattaaatcttattattatcccagtggttttgattatctctatttgtttaaaatgggctagataaaaca
26208400
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<-----------
HVH21
---------
<-----------
GT1
---------
<---------
AHL20(2)
<---------
YAB1
<---------
ARR14(2)
<---------
AHL20(2)
--------->
ICU4
--------->
ARR14(2)
--------->
AHL20(2)
<------
MYB83
*
TSS
----------->
GT1
<--------
----------->
GT1
--------->
AHL20(2)
<------
MYB46(1)
--------->
YAB1
<--------
<----------
DOF2
<---------
AHL20(2)
----------->
GT1
<---------
ATHB12
--------->
ALFIN1
gatgggcctgggcttttgttaaaaaaaactacggtattaatttaaacgatgtcgcttggtaattctc
attcttctcaatcgtgaatttgcagagtgcaga
26208500
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
---------->
DOF2
<-----------
HVH21
--------->
TGA1a
<---------
TGA1a
<---------
MYB52(1)
============================
bZIP_DOF
<----------
DOF2
--------->
bZIP60(1)
<---------
ANAC58
===============
bZIP_DOF
<---------
WOX13(1)
---------->
ID1
===================================
bZIP_DOF
--------->
ATHB12
--------->
MYB52(2)
<---------
ANAC58
<---------
bZIP60(1)
<---------
YAB1
<---------
TOE1(2)
<---------
ANAC46
================================
>
ZAT14
<---------
MYB52(1)
<---------
ANAC58
--------->
ANAC58
<-
>
ZAT18
<---------
ATHB12
<---------
ANAC58
--------->
ANAC58
---------
-
ZAT14
--------->
ANAC58
<---------
YAB1
===========================
bZIP_DOF
<---------
GLK1(2)
-
ZAT18
--------->
ANAC58
<---------
AHL20(2)
---------->
DOF2
--------->
SPL7
<----------
DOF2
cattgttgattgaagaacgctaatcgtttgtttttttaattgtttgcgttaagttaaagctacttgttgggacgtcaaagcaacgcttctttcgattctg
26208600
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AGI:
At1g69670.1
Description:
ATCUL3B/CUL3B (Cullin 3B); protein binding / ubiquitin-protein ligase. similar to ATCUL3/ATCUL3A/CUL3/CUL3A (Cullin 3A), protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G26830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81888.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48405.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72935.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Cullin homology; (InterPro:IPR016158); contains InterPro domain Cullin repeat-like (InterPro:IPR016159); contains InterPro domain Culli
Range:
from: 26205694
to: 26208105
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g69680.1
Description:
similar to unknown [Populus trichocarpa] (GB:ABK93471.1); contains InterPro domain Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124); contains InterPro domain Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); contains InterPro domain Ran-interacting Mog1 protein (InterPro:IPR007681)
Range:
from: 26208468
to: 26210591
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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