Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                 <---------ANAC58                     ------>MYB46(1)                                             <---------ANAC58                     ------>MYB83                                    --------->TOE2(3)         ------ ---------MYB52(1) <---------MYB59                                   --------->TOE1(3)<---------WOX13(1)   ccattacttctacatactataccaaattcaaaatttagaactacctattttgtagactaaaactttctcaagcttaaattgtttcttgatagactaaata  26145100                                                                                         <-------MYC3                                                                                         ------->MYC3            --------->DAG2                      --------->AHL20(2)                    --------->TGA1a           ---------->DOF2               ----------->RAV1(2)                          <---------TGA1a -----AHL20(1)                           <------NtERF2                                =============== ---->AHL20(1)                          ------>NtERF2          --------->ANAC46       =============== ---->AHL20(2)                          <---------ATERF1(1)    --------->ANAC58       =============== -----AHL20(2)                         <---------RAP2.6(2)     --------->ANAC58    <---------ZAT18 ---->ARR11(3)                        --------->RAP2.3(1)    --------->ANAC46    --------->At4g35610 -----ARR11(3)   <------MYB83         --------->ATERF1(1)  --------->AtMYB61     <---------At4g35610 --->AHL20(2)    <------MYB46(1)     <---------ATERF1(1)<-----------GT1         ------->TEIL  <------   tattatcccaaggtaaagttggtgtttatgtgtgtttgaaggcgcctgaaaaaaatagaaaccacacgactcgtcttgtatgtagctcacatgtgtcttt  26145200                                                                  <---------AHL20(2)                                                                 --------->ARR11(3)                                                                 <---------AHL20(2)                                                                 --------->AHL20(2)              --------->ANAC58                                   <---------ARR11(3)       <---------DAG2                                            --------->AHL20(1)       <----------DOF2               <---------At4g35610         <---------AHL20(1)      <---------ANAC58               --------->At4g35610        --------->AHL20(2)      <---------ANAC58      <---------AHL20(2)              --------->AHL20(2)  <----------DOF2   --------->AHL20(2)   <----------DOF2   --------->YAB1                       <---- ============bZIP_DOF<---------AHL20(2)  <---------ARR14(2)--------->AHL20(2)                   <---- =================bZIP_DOF --------->AHL20(2)           --------->YAB1<---------AHL20(2)       ------ ====bZIP_DOF --------->ANAC46--------->ARR11(3)     ----------->RAV1(1)  <-----------GT1      ------ ----DOF2     --------->ANAC58<---------ARR11(3)--------->PCF5--------->AHL20(2)            ---------   gcctctttgctttttcatgccattaaatattaaatcttcagcggtttttggtccccaacaataaaaatatattttcttactatattctatagttcattaa  26145300                                                <---------AHL20(2)                        <---------AHL20(2)     --------->AHL20(2) -----TOE2(3)           --------->AHL20(2)     <---------AHL20(1)                            -------- -----YAB1      ------>MYB46(1)                --------->AHL20(1)                           --------- --->AHL20(2)   ------>MYB83           ----------->GT1                                 ----------->GT1 --->YAB1     <---------MYB59       ------------------------>ANAC81             ---------->DOF2 ----- >TOE2(3)  <-----------GT1    <---------YAB1   <---------AHL20(2) <---------AtMYB61  ---------->DOF2   tattacattgaataaacctaatgttttttaatatgaaaaaccagaaaaataaaattgcattcggagttttggtcttgttttgaaaagaaaagaaaaaagt  26145400                          ----------->GT1                          <------------CBF                    <<<<<<<<<<<<<<<<<LFY                         --------->AHL20(2)            ------                  --------->AHL20(2)      --------->WOX13(1)    ----------->TBP               <------                --------->TOE2(3)       <---------ATHB12      --------------->AGL15       <---------DAG2 ->DAG2         --------->TOE1(3)  --------->TOE2(3)          --------->HSFB2a(2)         <----------DOF2 ->DOF2       <---------YAB1      <---------ANAC55(2)         <---------------AGL15  ------>ZmHOX2a(1) ---->ALFIN1  <---------TOE2(3)   ----------->GT1             <---------HSFB2a(2)<---------ALFIN1  *TSS   ggaagctagttgcattaacattaaacagtggcaaaaacgtaaatcattcactcactaagtttttctataaattgaactactcccctcctctgctttttcc  26145500                            <---------ICU4                                          <--------HAHB4                            --------->YAB1                                          --------->YAB1                         <---------ICU4                                       --------->ANAC58                         --------->YAB1                                       --------->ANAC46                      --------->YAB1               --------->ANAC46       ------>MYB46(1)                  --------->GLK1(2)          ------>ZmHOX2a(1)            ------>MYB83                 <---------ARR14(2)          ============================HOX2a_HOX2a<---------ICU4                 --------->ARR14(2)        <-----------------AGL1      --------->HSFB2a(1)                 <---------GLK1(2)        ---------->ID1          <------ZmHOX2a(2)<---------ATHB12            --------->MYB52(1)<---------CCA1(2)<----------DOF2   <---------ARR11(3)<---------YAB1         ------>MYB46(1)--------->ICU4    <-----------GT1        --------->ARR11(3)--------->ICU4 ------>CBF ----------->RAV1(1)          <-----------GT1     ---------->DOF2  --------->ANAC58 -----GT1------>MYB83<---------YAB1  <----------DOF2  ---------->DOF2  <---------HSFB2a(1) <---------   aattctaaaccaaacaacagattctcataatcatctcttcttttttcctctttacgaaaagaagaaagatcaaaccttccaagtaatcattttctttctc  26145600                                                                                     ---------->DOF2                                                                                ----------->GT1                                                                                <----------ID1                                                                           --------->ANAC46                      <---------ZAT6        ------>ZmHOX2a(2)            <---------------AGL15 -DOF2    <---------ALFIN1                  <---------MYB59 --------->ARR14(2)---------->DOF2   tctctcacacacacacattcactagttttagcttcacaaaatgtgatctaacttcatttacctatatgcaggtttacacaaaaagaaaaaagaacgatgg  26145700                                               <-----------HVH21                                            <---------ANAC55(2)                                            ===================================MYC_MYB                                            --------->ANAC55(2)                                            <---------TGA1a                                            <---------O2                                            --------->O2                                            =================================MYC_MYB                                         ----------->HVH21                                        <-----------HVH21                            --------->ANAC55(1)                                        <-----------TGA1                             --------->ANAC46                                       --------->bZIP60(2)                      ===============MYC_MYB                                       <---------bZIP60(1)                      <---------ZAT18                                       ======================================MYC_MYB --------->ANAC58                                       ========================================MYC_MYB                                       <---------bZIP60(2)                     --------->ANAC58                                       <---------ANAC58                     <---------WRKY38(1)                                       <---------ANAC58                     <---------WRKY45                                       <<<<<<<<<<HY5                      <-----------HVH21                                       --------->bZIP60(1)               <------MYB46(1)                                       --------->TGA2(1)                 <------MYB83--------->ANAC58                                       <---------O2                     <------MYB83 --------->O2                                       <---------TGA2(1)                --------->MYB59                                       --------->TGA1a                  <------MYB46(1)                                       --------->ANAC46               <--------P------->GAMYB                                       <---------ANAC55(2)            =========================MYC_MYB                                       --------->ANAC55(2)            --------->ALFIN1  ----------->RAV1(1)                                       <---------TGA1a               ==========================MYC_MYB                                       --------->O2                  <-------GAMYB   --------->bZIP60(2)                                      <-----------STF1             <---------AtMYB61 --------->TGA1a                                      ----------->STF1            <------ZmHOX2a(1)<---------ALFIN1                                     <---------TGA2(2)         <------NtERF2<---------WRKY12                                    ----------->TGA1   --------->ARR14(2)<---------ANAC46           -                                    <---------ATHB12<---------ATHB12<---------MYB46(3)  <---------ALFIN1                       ==========================MYC_MYB    <---------LBD16--------->WRKY18(1)      <    <-----------GT1    ===============================MYC_MYB --------->LBD16  --------->ANAC58     <  <-----------HVH21    -------->P   ----------->HVH21<---------MYB46(3) <---------MYB46(3)      <----   ctcttgtcaccttcttgtttattgctacccttggagcaatgacgtcacatgtcaatggttacgccggaggaggttgggtcaacgcacacgccacattcta  26145800                --------->LBD16               <---------HSFB2a(2)               --------->ANAC46               <---------ATERF1(2)               --------->ATERF1(2)               --------->HSFB2a(2)              <---------LBD16           <---------ANAC58         <---------YAB1    <---------MYB46(3)   --------->ALFIN1                                                                         ---------   <---------AtMYB61                                                                  --------->TOE2(3)   <---------ANAC46                                                                 ---------->ID1 --------->MYB55(2)                      --------->HSFC1(2)                         <-----------GT1 <---------MYB46(3)                      --------->HSFB2a(1)       ---------->DOF2 <-----------GT1 -------->ALFIN1------>NtERF2            <---------HSFC1(2)     <----------DOF2<---------GLK1(2) ---------AtMYB61                  <---------ANAC58  --------->ANAC58          --------->ARR11(3) ---------DEAR3(1)       ----------->GT1------->TEIL --------->ANAC58          <---------ARR11(3) -----LBD16<---------ANAC58        <---------ANAC58  --------->ANAC46   <----------DOF2<----------DOF2   cggtggtggtgatgcttccggcacaatgggtatatttccttgaaccttctctcacaagtcacaaggctttaaagctttcaagatttttcctttaccacaa  26145900                                                                                   --------->ANAC58                                                                                <----------CDC5                                                                             --------->ATERF1(1)                                                                             --------->RAP2.3(1)                                                                             <------NtERF2                                                                            <---------ORA47(2)                                                                            <---------RAP2.6(1)                                                                            <---------DEAR4(2)                                                                            ------>NtERF2                                                                            <---------ATERF1(1)                                                                            <---------RRTF1(1)                                                                            <---------ERF1                                     --------->ANAC55(2)                    <---------RAP2.3(1)                                     --------->ANAC58                      <---------RRTF1(3)                                     <---------ANAC55(2)                   <---------DEAR3(1)                                    <---------LBD16                        <---------RAP2.3(2)                                   --------->CCA1(2)                       <---------RRTF1(2)                                  --------->ARR11(1)                       --------->DEAR3(1)                                  --------->ARR14(2)                       <---------RAP2.3(3)                           <---------ANAC58                               <---------ABI4(1)                           <---------ANAC58                              <---------ATERF1(1)                          <-------TEIL                                  --------->ANAC46                         --------->ALFIN1                             <---------ALFIN1                      --------->ALFIN1                               ------>MYB83  --------->ANAC58 <                     <------ZmHOX2a(1)   --------->GLK1(1)           -------->P------>NtERF2        -                  <-----------RAV1(2)--------->ANAC58                ------>MYB46(1)                <              <---------ANAC58    <---------ARR14(2)               --------->AtMYB61   --------->ANAC58              <-------GAMYB<---------ANAC46 --------->TOE2(3)     --------->MYB46(3)   --------->ANAC58 >TOE2(3)     <---------ANAC58 <---------ANAC46                   --------->DEAR3(2)   --------->ANAC46   ttcttatgaaattttgggttgcaggaggtgcttgtggatacggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctatt  26146000  Previous    Next  AGI:  At1g69530.1    Description:  ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1). Identical to Expansin-A1 precursor (EXPA1) [Arabidopsis Thaliana] (GB:Q9C554;GB:Q38863); similar to ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A10) [Arabidopsis thaliana] (TAIR:AT1G26770.1); similar to ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A10) [Arabidopsis thaliana] (TAIR:AT1G26770.2); similar to alpha-expansin 3 [Populus tremula x Populus tremuloides] (GB:AAR09170.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Range:  from: 26145499    to: 26147159    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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