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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                   <------ZmHOX2a(1)
                                                              <------MYB46(1)
                                                              <------MYB83
                                                             --------->MYB46(2)
                                                             --------->MYB111(1)
                                                             --------->MYB59
                                                         <---------ICU4        <---------------AGL15
                                                         --------->ATHB12      --------------->AGL15
                                                         --------->YAB1--------->ANAC58
                                                         <--------HAHB4--------->GLK1(2)
                             --------->YAB1     ==========================HOX2a_HOX2a
                       <----------DOF2          ------>ZmHOX2a(2) <------MYB46(1)   ---------->DOF2
               --------->REM1(1)<---------ICU4--------->ARR11(3)  <------MYB83----------------->AGL3
             ------>ZmHOX2a(1)  --------->YAB1<---------ARR11(3)<--------P    ======================
 <----------DOF2--------->TOE2(3)    ----------->RAV1(2)<---------YAB1 --------->ANAC58           <-
 
ttttctttttggcatcctacattagtcttttttcataatcacctggtttgatcttgtttatcattaggtaggagaagctataccattaaaagataactct  26132800
                                                                                             <------
                                                                                           <--------
                                                                                          --------->ANAC58
                                                                                          --------->ANAC58
                                                        ---------->DOF2                   <---------ANAC55(2)
                                                     --------->ANAC58                     --------->ANAC55(2)
                                                     --------->ANAC46       <---------MYB52(1)
                                                     --------->ANAC58      <---------------AGL15
                                             --------->ANAC58             ----------------->AG
               <---------ALFIN1              --------->ANAC58             ==========================
             <<<<<<<<<<<<<<<<<LFY           --------->WOX13(1)            ----------------->AGL1
             ----------->RAV1(1)         <-----------HVH21                ----------------->AGL3  ==
       <---------MYB46(3)               --------->bZIP60(1)               ----------------->AGL2  <-
     <---------At4g35610                --------->TGA2(1)          ------>ZmHOX2a(1)  ----------->GT1
     <-------GAMYB                      <---------TGA2(1) <---------TOE2(3)--------------->AGL15----
===========================================================================================MADS_MADS
--------MYB46(3)                        <---------bZIP60(1)      <---------ICU4     ---------->DOF2
 
gtggatgcagttgttgcaacactggttctatgttctgtctctgatgtcactcaaacactcaaaggtaatcctttcttcccttattgagaaagtaagtaac  26132900
                                      --------->At4g35610
  <---------HSFB2a(2)                 <---------At4g35610                                 <-------TEIL
  --------->HSFB2a(2)                 <---------ZAT2                                   ----------->GT1
-----GT1                          ------->MYC3                                        <-------------
-MYB52(2)     --------->YAB1      <-------MYC3                                        --------->DAG2
============MADS_MADS            --------->TGA1a                                    ---------->DOF2
===========================================bZIP_DOF                              --------->At4g35610
---------DOF2 ----------->GT1    <---------TGA1a                                 <---------At4g35610
----------->AGL15         --------->GLK1(1)       --------->ALFIN1        <-----------RAV1(1) ------
 
ccttttcagaagttcaatggtaatttcagaaatcaaacgtgtgctgagacaaggaggggttttcatcttcttagaacatgttgcagcaaaaggtacataa  26133000
                                                      <-------GAMYB
                                                     <---------MYB46(3)
                                                     --------->MYB55(2)
                                                     <-----------RAV1(1)
                                                     =================RAV
                                                     --------->MYB52(2)
                                                     --------->MYB111(2)
                                              --------->ARR14(2)
                                              <---------ARR14(2)
                                        <---------ARR14(2)         ------>ZmHOX2a(2)               -
                                        --------->KAN4(2)          --------->HSFB2a(1)             <
      --------->CCA1(2)                 --------->ARR14(2)  <---------At4g35610                   <-
     <---------ARR11(3)                --------->KAN4(1)    --------->At4g35610                  ---
     --------->ARR11(3)                <---------KAN4(1)  <-----------RAV1(2)                    ---
--AtSPL8                          --------->TOE2(3)<-------GAMYB   <---------HSFB2a(1)           <--
--->AHL20(2)                      --------->TOE1(3)<---------MYB52(1)                          -----
 
atttgagagatataaaactcttatattgcagacaaaacctgaatattcgtattcggttgttgcagatggatcgttcttcaagcgtttgcagaaattgtta  26133100
       <---------ZAT2
       --------->ZAT2
       --------->At4g35610
       <---------At4g35610
      ----------->RAV1(1)                                                                        <--
----->ZmHOX2a(2)                                                                               -----
-------TEIL                                                                                    <----
-----ZmHOX2a(2)                                                  --------->At4g35610       ---------
------>ARR14(2)                       --------->ANAC58           --------->ZAT2            <-------TEIL
------>AGP1                           --------->ANAC58  ------->TEIL                   <------------
-------ARR14(2)     --------->At4g35610      --------->ANAC46    <---------ZAT2  <------ZmHOX2a(1)<-
------>ARR10        <---------At4g35610  --------->CCA1(2)       <---------At4g35610   <------------
 
gatccgttgcagcagagacttgcagatggatgccatttggcaagaaacacgagagagtgcatcttggaagctggttttagtggaggagttgaagtacaga  26133200
   --------------->AGL15                                                                      <-----
-------DAG2                          <---------ARR11(1)                                     --------
---->ARR11(3)                       <---------CCA1(2)                                       --------
-----ARR11(3)                 <---------ARR11(3)                             <---------AHL20(2)
>ZAT14                        --------->ARR11(3)                       <----------DOF2     ---------
---AtSPL8   <---------ANAC58--------->ANAC58                          <---------ICU4       <--------
---------DOF2*TSS      ----------->HVH21          <---------ANAC58   <---------YAB1      --------->YAB1
---AtSPL3   <---------ANAC58--------->ANAC58      <---------ANAC58 --------->YAB1  --------->ZAT6  <
 
ccttttctatgtatagcttcccttggatgacaagacctcatatctatggactagcttacaactaaaactatcatctttattcaattacactaaaatgatt  26133300
                                                                                                 ---
----WOX13(1)                   <-----------GT1                                         <---------ANAC46
>HAHB4                        <---------YAB1                           --------->AHL20(2) --------->ZAT18
->ATHB12                   <---------MYB52(1) ----------->GT1          <---------AHL20(2) --------->ETT(2)
>ICU4                <---------WOX13(1)     ----------->GT1    <---------ANAC46--------->CCA1(2) <--
-YAB1     <---------YAB1  <-------GAMYB--------->AHL20(2)    <---------ICU4   <---------ARR11(3) ---
----------DOF2     --------->ATHB12   <---------AHL20(2)    --------->ICU4    --------->ARR11(1)<---
 
ggctttgaatgttttgattcgctgattgctgttattactaaataatatggagaaaaaatgctaattatgtgtaattaaaaagatttgattttgtggacag  26133400
                  --------->ARR11(3)
                  <---------ARR14(2)                                                             <--
        ----------->GT1     <-----------GT1                                                 --------
------>GLK1(2)    <---------ARR11(3)                                       ----------->GT1 <--------
-------ARR14(2)   --------->ARR14(2)                                   --------->YAB1      ---------
------>ARR14(2)   <---------ARR11(1)                                  <---------YAB1       <--------
------GLK1(2)    <---------CCA1(2)                                 <----------DOF2       -----------
 
aatctgaagtagagaaaaacatatcttcatgttactcttatgctctgttttggtatatgagtaatttgagcttttgataagttaaaagaatggagattct  26133500
    <-----------GT1                                        <----------DOF2                       ---
-------ALFIN1                                             <---------ANAC58                       <--
->GLK1(2)                                                 <---------ANAC46         <---------At4g35610
-ARR14(2)                                                 <---------ANAC58         --------->At4g35610
>ARR14(2)                    --------->YAB1        --------->ARR11(3)            <-----------RAV1(2)
-GLK1(2)                    <------ZmHOX2a(2)      <---------GLK1(2)      --------->YAB1       <----
>ARR10           --------->WOX13(1)      <---------HSFB2a(2)        --------->GLK1(2)   ------->TEIL
 
ccacttctcaccttcttcatcaatctcgacgatcatacatagacctcgaagaaagattatggctttgagagattccatcaaaacccagatgaatctcatt  26133600
                                  <---------HSFB2a(2)
                                  --------->HSFB2a(2)   --------->At4g35610
                       --------->ARR14(2)               <---------At4g35610
    --------->GLK1(2)  <---------ARR14(2)               --------->ZAT2
   <---------GLK1(2)   --------->GLK1(2)                <---------ZAT2
------>ANAC46         <---------GLK1(2)    <---------ARR11(3)
-------YAB1         <---------TOE1(3)      --------->ARR11(3)
-----ICU4       <----------DOF2------>ZmHOX2a(1)      <------ZmHOX2a(1)                          ---
 
acgacagagtctgtttcatctttcaggttctgtccttgtggaagaagacatttcataggagctgctatgacttcaatgccatttcttccaatctctccct  26133700
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AGI:  At1g69520.1   
Description:  methyltransferase-related. similar to UbiE/COQ5 methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G69526.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48363.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216)
Range:  from: 26131951    to: 26133265    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At1g69523.1   
Description:  UbiE/COQ5 methyltransferase family protein. similar to UbiE/COQ5 methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G69526.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48363.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216)
Range:  from: 26133214    to: 26134955    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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