Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------MYB52(1)------>ZmHOX2a(2)                                                 <-------GAMYB     <------ZmHOX2a(2)                                                <---------DEAR3(2) --------->GLK1(1)                                                <---------MYB46(3)<-----------ARR10                                               <---------DEAR3(1) <---------ARR11(1)                                               <---------RAP2.6(2)--------->ARR11(3)                                        <---------LBD16           --------->ARR14(2)                           <---------AtMYB61  --------->ATERF1(1) --------->ARR14(3)                           --------->ALFIN1 --------->ALFIN1      <---------ARR11(3)                         <---------MYB46(3) <---------DEAR3(1)    <---------ARR14(2)                         --------->MYB55(2)--------->ATERF1(1)    <---------ARR14(3)                <                        <---------AtMYB61  <------NtERF2         <---------CCA1(2)               <---                        <---------DEAR3(1)<---------ATERF1(1)    <---------ARR14(1)     <---------At4g35610                        --------->ALFIN1<------NtERF2           <------NtERF2           --------->At4g35610                       <---------MYB52(1)<---------DEAR3(1)     --------->LBD16         --------->ZAT2                      --------->LBD16 <---------DEAR3(1)       --------->RAP2.6(2)      <---------ZAT2                    <---------LBD16  <---------LBD16          <---------LBD16         <--------P ----          --------->MYB52(1)  <---------ANAC46<------NtERF2  ------>NtERF2         <---------TOE2(3)-   agtaaaaaaaactcacggtgtctccggtggtggtgttttctcggcggaggcggttgagttctcggccggatcttcacttgaacttgaggtagctgaggga  26061300                                    <-------GAMYB                                   <---------MYB46(3)                                 <------NtERF2                                 --------->ATERF1(1)                                 <---------LBD16                                ------>NtERF2                                <---------ATERF1(1)                                <---------RRTF1(1)                                <---------RAP2.6(1)                                <---------ORA47(2)                                <---------RAP2.3(1)                                <---------ERF1                               <---------DEAR3(1)                               <---------ATERF1(2)                               --------->DEAR3(1)                               <---------RAP2.3(2)                               <---------RAP2.3(3)                <------MYB83                               <---------RAP2.6(2)                <------MYB46(1)                               <---------RRTF1(2)                <---------TOE1(2)                               <---------RRTF1(3)                --------->MYB59                          --------->MYB52(1)                     --------->MYB111(1)                         <---------ARR14(2)                      <---------TOE2(2)                       ------->GAMYB<------NtERF2               <--------P                      --------->ANAC58                          <---------MYB55(1)                      --------->ANAC58                        <---------MYB46(3)      <---------ZAT6                     --------->At4g35610                      --------->MYB55(2)  <---------ANAC58                    ----------->RAV1(1)                      --------->ALFIN1     <---------ANAC58                    --------->MYB52(1)    <------ZmHOX2a(1)  <---------AtMYB61    <---------ANAC46          <---------ZAT6 --------->ARR14(2)               <---------DEAR3(1)    <---------MYB46(3)   <---------YAB1------->GAMYB <---------DREB2C(2)        <---------DREB2C(2)   --------->MYB55(2) ---------YAB1 --------->RAP2.6(3)<---------ANAC46        <---------ANAC46     <---------AtMYB61 ------YAB1   <---------DOF5.7(2)<---------At4g35610    --------->MYB52(1)    <---------MYB52(1) ----->ICU4  ----------->HVH21<---------ABI4(1)        ----------->TGA1      --------->LBD16 -------->ICU4--------->MYB52(1)<---------DEAR4(2)     ----------->HVH21   <---------LBD16   ttattattagtagaggtaacggcaacggaaacggcggcggatgaggaacaagaagaagtgacggtggtaggtttgactccggtggtttgtgttaaatcgg  26061400                                               --------->DEAR3(2)                                               --------->MYB46(3)                                              ------>MYB46(1)                                 <---------MYB46(3)                                --------->ALFIN1------->GAMYB                                <---------AtMYB61                      <---------HSFC1(2)     <------                             <------ZmHOX2a(1)-------->P      --------->ARR14(2)              <------                  =============HOX2a_HOX2a    ------>MYB83    <---------ARR14(2)              -------   ------->TEIL   <------ZmHOX2a(1)--------->ALFIN1           --------->ARR11(3)              -------   <---------ARR14(2)   ------>ZmHOX2a(2)<---------ARR14(2)   <---------ARR11(3)              -------   --------->GLK1(2)<---------YAB1 <---------ANAC46 <-----------HVH21  --------->HSFC1(2)    <-------   --------->ARR14(2)--------->ATHB12  <---------MYB46(3)    <------ZmHOX2a(1) <-----------HVH21   agtcgaatctgagactgtgaggatgatcggaggagtggtggaggttccaaccgaagtcagagaggatattggaagtgtctcggtcgaagaagtcagaatc  26061500                                                                          <---------WOX13(1)                                                                        --------->ATHB12                                                                     --------->YAB1                                                            <---------ARR11(3)                                                            --------->ARR14(2)                                               ===================HOX2a_HOX2a         <---------ZAT6                        <---------LBD16------>ZmHOX2a(2) <---------At4g35610                          <------ZmHOX2a(2)      <---------ICU4 --------->At4g35610                          ====================HOX2a_HOX2a  ------>ZmHOX2a(2) --------->ZAT2                     <-------GAMYB          <------ZmHOX2a(1)--------->ATHB12 <---------ZAT2                    <---------DEAR3(1)      ===========================HOX2a_HOX2a ---ARR11(3)                       <---------MYB46(3)   <---------LBD16<---------YAB1 ---ARR14(2)                      <------NtERF2------>ZmHOX2a(2)    --------->ICU4 -->GLK1(2)              --------->ZAT2      <---------ARR14(2)     <---------YAB1             ------ -->ARR11(3)             <---------ZAT2      --------->ARR14(2)   --------->YAB1              <------ -->ARR14(2)            --------->AtLEC2   ----------->ARR10<---------ARR14(2) <---------DEAR3(1) --GLK1(2)              --------->ANAC46<---------ANAC46--------->YAB1 --------->ICU4       ---------   ttgagctgtgagtgtgagttctctccaagcagagtcgtcgttgctcagatcgggattatcaggatcgttcatgatgattgatcggcgagagaagtagtga  26061600                                                                                                  ---                                                            <---------WOX13(1)   ---------->DOF2  *TSS --->YAB1                               <------ZmHOX2a(1) --------->ATHB12   ---------->DOF2    ----- ---ZAT6    ---------->DOF2     ---------->DOF2    <---------MYB46(3)---------->DOF2 ---------->DOF2 -->GT1--------->CCA1(2)  ----------->GT1 --------->ZAT2 <---------YAB1  ---------->DOF2  ---------->DOF2   taagagaagatagagaaagagaggtagagagagaaaaagagaggagctagggtttgttcttgattggaagagaaagaaagaaagaaagaaagaaaagaga  26061700                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                <----                                                                                                -----                                                                                               <-----                              <---------ANAC46     ------>ZmHOX2a(2)                           ------                            --------->ZAT14       <------ZmHOX2a(2)                            <-----                            --------->ZAT18 <------ZmHOX2a(1)                              --------->AHL20(2)                            <---------ZAT14 ==============HOX2a_HOX2a                      <---------AHL20(2)                        --------->DAG2      =============HOX2a_HOX2a                    <----------DOF2                       ---------->DOF2<-----------HVH21 <---------GLK1(2)            --------->GLK1(2) -------->GT1          <---------DOF5.7(2)--------->ANAC58                    --------->ANAC46 ------ ------>GT1          --------->DOF5.7(2)  --------->ANAC58          <----------DOF2 <---------GLK1(2)   gtgaaaaaaaaactttgaaacccgttaaagtgcagtgtctcgtcaaggaccgatctcagactctctctctctttgtctatacgagagattcttttaattt  26061800                                         <--------ATHB1                                         -------->HAHB4                                         <---------ICU4                                        <---------YAB1                                        --------->ICU4                                        <---------ATHB51                              <---------ARR11(3)                              --------->ARR11(3)                              --------->AHL20(1)                                                  --- ---------AHL20(2)            <---------AHL20(1)                                                  <-- -------->AHL20(2)            <---------AHL20(2)                                                 ---- ------->AHL20(2)             --------->AHL20(2)                                               <----- -----AHL20(2)               --------->AHL20(2)                                               <------ ---->AHL20(2)  --------->ANAC55(2)   --------->YAB1                                        --------- ----AHL20(1)   <---------ANAC58      <---------ICU4            ---------->DOF2            --------->ANAC58 --->AHL20(2)   <---------ANAC58 <---------AHL20(2)      <----------ID1               <-------------- ----AHL20(2)   <---------ANAC55(2)--------->YAB1        ----------->GT1      ----------->GT1-------- --->AHL20(1)   <---------ANAC46 --------->AHL20(2)     ----------->GT1  ---------->DOF2   --------->ANAC58   atttaatttttggaaattgcgtaaacacaaaatatattaataataattcaagagagagagggaaaaaaaagaagagaaagttgaaaaaatggaacgtcaa  26061900                                                                   <----------DOF2           <---------ANAC55(2)                                     <---------DAG2       <-----------HVH21                                    <---------O2      <----------ID1                          --------->DAG2--------->TGA1a    --------->DAG2   --------->ARR14(2)      =========================bZIP_DOF  ---------->DOF2    <---------ARR14(2)      ---------->DOF2--------->ANAC58 ------>TOE2(3)      --------->MYB52(1)  --------->LBD16    <---------TGA1a ---------HVH21   --------->ANAC58      <---------ANAC46    --------->O2 ----->ANAC46     --------->ANAC58     <---------LBD16      ==================bZIP_DOF ----DOF5.7(2)    --------->ANAC46     --------->At4g35610  --------->ANAC58 ---WRKY12 ----------->GT1   <---------At4g35610          <---------ALFIN1 >TOE2(3)<---------WRKY12    --------->ATERF1(1)       --------->PCF2                    ------>NtERF2 -AtSPL3--------->WRKY18(1) <---------ATERF1(1)     <---------At4g35610                 --------->DEAR3(1) ->DOF5.7(2) ----------->HVH21  <---------At4g35610 --------->At4g35610       ------>ZmHOX2a(1)   cgtcaaaagggtcaagtgaaacggaacgggaggctgctagtagcggagaaagtgagaggcccacgtctactttttgagtcctatagatcgacgcctattt  26062000                <-----------GT1        --------->GLK1(1)                                      --------------->AtSPL8       <---------ARR14(2)    <---------TOE2(3)                 <---------------AtSPL3       <---------GLK1(2)     <---------YAB1          <---------YAB1       --------->ARR14(2)  --------->YAB1          --------->ZAT6    --------->ZAT6   <---------LBD16      --------->WOX13(1)      <----------DOF2<---------------AtSPL8        <------ZmHOX2a(1)   ttagactcggatttgcatttactcttcaattaacatagatgatgagacttctttcactattgaaattggtaccactaatccaattgtccaaagaaggacg  26062100                               <-------TEIL                    <---------YAB1                            <------MYB83                     --------------->AGL15         <---------YAB1                    <---------YAB1       <----------DOF2     ========================================      --------->ARR14(2)    <------MYB46(1)            ------->TEIL             <-----------RAV1(1)      <---------ARR14(2)    <---------MYB46(3)        <---------CCA1(2)       <---------At5g28300   -      <---------ARR11(3)<---------MYB46(3)          --------->ANAC55(2)      <-----------GT1    <----   attagcaagatttgttcgttttatagttgttggttcatcgagacttttgtttttatgtatctactactattagtcgatgttactgttgcaactatgaaac  26062200  Previous    Next  AGI:  At1g69310.1    Description:  WRKY57 (WRKY DNA-binding protein 57); transcription factor. Identical to Probable WRKY transcription factor 57 (WRKY57) [Arabidopsis Thaliana] (GB:Q9C983;GB:Q9C798); similar to WRKY48 (WRKY DNA-binding protein 48), transcription factor [Arabidopsis thaliana] (TAIR:AT5G49520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41888.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 26057971    to: 26061698    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version