AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                    --------->LBD16
                                                    ------>NtERF2
                                               --------->At4g35610
                                               <---------At4g35610
                                            ------>ZmHOX2a(1)
                                       --------->KAN4(2)
                                       <---------GLK1(2)
                                       <---------ARR14(2)
      <---------ICU4                  --------->HSFB2a(1)
      --------->YAB1                  --------->HSFC1(2)                <------ZmHOX2a(1)
     --------->ICU4                   <---------HSFB2a(1)             <---------TOE1(2)
     <---------YAB1             --------->At4g35610--------->DEAR3(1)------>ZmHOX2a(1)
 <-----------TGA1      ---------->ID1 <---------HSFC1(2)             <---------HSFB2a(2)          <-
------NtERF2        xxxxxxxxxxxxxxxx>smallRNA(i)  <---------LBD16 ------>ZmHOX2a(1)    <---------LBD16
-------DEAR3(1)  <<<<<<<<<TBF1  <---------At4g35610--------->ANAC46  --------->HSFB2a(2)   <--------
 
tcgtcgtcatcatcatcttcttcttcgtcttcttcatcagaagattcctcatctccgcctctcgctctcctcctaggactaactcccattcgcggtttgg  26029400
                                                            <---------ARR11(3)
                                                        <---------MYB59
                                                  <---------------AtSPL3
                                                --------->YAB1                     <---------DEAR3(1)
                                                <---------ICU4                  <---------DEAR3(1)
                                   ------>ZmHOX2a(2)  --------->SPL7   --------->YAB1
   --------->ANAC58               <------ZmHOX2a(2) <---------SPL7    <-------TEIL<------NtERF2
   --------->ANAC58              <---------ARR14(2)--------->TOE2(1)<---------GLK1(2)<------NtERF2
  --------->SPL7                 --------->ARR14(2)--------->TOE1(1)<---------ARR14(2)  <------NtERF2
--------------AtSPL3   --------->ZAT6          <---------ATHB12     --------->ARR14(2)<---------DEAR3(1)
-ANAC46               <---------YAB1      <-----------GT1  --------->GLK1(1) --------->DEAR3(1)    -
 
acgagtacggactgttcttcttactatgactactccgatctgttttcacaatcatcgtaccgaaatctccagattcatcaccgtcgtcgtcgtcgtaatc  26029500
              --------->LBD16
           ------>NtERF2
          --------->DEAR3(1)
         --------->ATERF1(1)
         --------->RAP2.3(1)
         <------NtERF2
        ------>NtERF2
        --------->ABI4(1)
        <---------ATERF1(1)
       --------->RAP2.3(3)
       --------->RRTF1(3)
       --------->RRTF1(2)
       --------->DEAR3(1)
       --------->RAP2.6(2)
       <---------ALFIN1
       --------->RAP2.3(2)
      --------->RAP2.6(1)
      --------->ORA47(2)
      --------->ATERF1(1)
      --------->RAP2.3(1)
      --------->RRTF1(1)
      --------->ERF1
      --------->DEAR4(2)
      <------NtERF2
     <---------ATERF1(1)
     ------>NtERF2
    --------->ANAC46
    <---------DEAR3(1)                                               --------->At4g35610
    --------->ANAC58                                            <---------ICU4
    --------->ANAC58                                            --------->YAB1         <---------MYB52(1)
   ------>NtERF2--------->GLK1(1)                          <-----------TGA1           <-----------TGA1
   <---------ABI4(2)                                      --------->YAB1              <-----------HVH21
  --------->DEAR3(1)                                   <---------GLK1(2)   ------>ZmHOX2a(1)
  <---------ATERF1(1)                         <------ZmHOX2a(1)--------->ICU4        --------->ANAC46
---------->HVH21<---------GLK1(1)          <------ZmHOX2a(1)   <---------YAB1   ------>ZmHOX2a(1) <-
 
gagcgacgcgccgcctccgaaatccttgggaagacgcttgagaagaggaggaagcatagaatcgtcatcatcatcttcctctccttctccgtcactatcg  26029600
                                                        <---------ANAC58
                                                        <---------ANAC58                           <
                                                    <---------DAG2                                 -
                                                    <----------DOF2                                -
                                                   <---------ANAC58                                <
               <---------ANAC58                    <---------ANAC58                               --
               ----------->GT1                --------->ALFIN1                       --------->GLK1(2)
               <---------ANAC58           <-----------RAV1(2)        ------>ZmHOX2a(2)          <---
 --------->REM1(2)                       ===================================HOX2a_HOX2a--------->YAB1
---------DOF2  <---------ANAC46          ------>ZmHOX2a(1)<---------MYB52(1)     --------->YAB1<----
 
cctttgtagaccattgtagcgtataaatcgacattttcgtcttcctcaggtttggctttacgtttgtctcgatctcgaccttgatcagaatcagagtcgg  26029700
                                                 --------->DEAR3(1)
                                                 ----------->HVH21
                                                <------NtERF2
                                                --------->DEAR3(2)
                                               <---------ATERF1(1)
                                               ------>NtERF2
                                              --------->ARR14(2)
                                              <---------ARR14(2)
       ---------->DOF2                       --------->ATERF1(1)
     --------->ANAC58                       ------>NtERF2
     --------->ANAC58                       --------->LBD16
     --------->ANAC46   >>>>>>>GRF7         <---------ATERF1(1)
---------ZAT14         <-----------RAV1(2)<---------LBD16
-------->ZAT18       <-----------HVH21  <---------ARR14(2)                                         <
-------->ZAT14   --------->ARR14(2)     --------->ARR14(2)                                         <
---------ZAT18   <---------ARR14(2)  --------->LBD16     <---------GLK1(1)                        <-
------->ALFIN1<---------ANAC46     <------NtERF2--------->ATERF1(1)                               <-
------ANAC46--------->ZAT18        <---------LBD16------>NtERF2           ------>ZmHOX2a(2)     <---
--NtERF2   --------->ALFIN1--------->ALFIN1<---------RAP2.6(2)        <---------YAB1 ------>NtERF2--
 
agtggactacgaaagtggagtatatgtcaggtttgggctccggtttccggctccgacgagatttcggcgagttatgatccatctatggcgactctaaacc  26029800
      <------NtERF2
     --------->LBD16
     ------>NtERF2
    <---------LBD16                                                       --------->ICU4
   <---------LBD16                                                      --------->AHL20(2)
   --------->ATERF1(1)                                                 <---------ATHB12
   <------NtERF2                                                       <---------AHL20(2)
  ------>NtERF2                                               <---------ICU4
  <---------RAP2.3(1)                                         -------->HAHB4
 <---------DEAR3(1)                                          --------->ICU4
 --------->DEAR3(1)                      <---------ANAC55(2) <---------ATHB12
--------->ATERF1(1)               ----------->GT1         <---------AHL20(2)
<------NtERF2                 ---------->DOF2             --------->AHL20(2)
---------ATERF1(1)         --------->ANAC58           <---------YAB1   <---------ATHB51
-----------HVH21           --------->ANAC58          --------->AHL20(2)--------->AHL20(2)
--------O2                 --------->AtLEC2      ----------->GT1<---------YAB1
--------DEAR3(1)         <-----------RAV1(2)    ---------->ID1--------->YAB1            <------ZmHOX2a(1)
--------HVH21          <-----------HVH21 --------->ANAC46--------->AHL20(2)           --------->MYB59
------->O2      ---------->DOF2  *TSS    --------->ANAC55(2)<---------TOE2(3)     <---------ICU4
 
gtcgtcgccgggagagagagaaagagagtcaggcaaagagtaatacgtctcgtcgttaaaattaatgatgacaaataatttttaaaaattaggaatgggc  26029900
                              <---------AHL20(2)
                              --------->AHL20(2)
               --------->At4g35610
               <---------ZAT2--------->AHL20(2)
               --------->ZAT2<---------AHL20(2)
      --------->AHL20(1)     <---------AHL20(1)
      <---------AHL20(1)  --------->AHL20(2)                                     --------->GLK1(2)
      --------->ARR11(3)  <---------AHL20(2)                                 --------->YAB1        <
    <---------AHL20(1)   --------->AHL20(2)              ---------->DOF2 <---------ANAC46   --------
    <---------AHL20(2)   <---------AHL20(2)      ----------->HVH21       <---------ANAC58   <-------
    --------->AHL20(1) --------->YAB1   <---------MYB52(1)               <---------ANAC58  <------ZmHOX2a(1)
 
caactaaaatattttgcaagctggaatattaatttaattctctgttttgtctatgacctctaaagacattactgtttcttgcataatctgtataggattc  26030000
        <---------AHL20(2)
       --------->AHL20(2)
<------MYB46(1)
<------MYB83                    <---------GLK1(1)
----------->GT1            --------->MYB52(1)                                      <---------ANAC46
---------MYB46(3)        <---------MYB52(2)           ---------->DOF2              <---------ANAC58
->ARR14(2)    --------->At5g28300          <-------GAMYB                           <---------ANAC58
--ARR14(2)   ----------->GT1<---------TOE2(3)    <---------SPL7        ---------->DOF2
 
gattggtgaaataaatcggtaaaaaaaaactaacgatatcagagactgttatcgttcgaaagacatacaacaattgaagcacatatgcgtagaaatttag  26030100
                                                             --------->ALFIN1
                                                            --------->TOE1(2)
                                                           <---------bZIP60(2)
                                                           --------->TGA1a
                                                           <---------O2
                                                           ===================bZIP_DOF
                                                           <---------ANAC58
                                                           --------->bZIP60(1)
                                                           <---------ANAC46
                                                           <---------ANAC58
                                                           --------->O2
                                                           <---------ANAC55(1)
                                                           <---------bZIP60(1)
                                                          ----------->STF1
                                                        ----------->TGA1
                                                        ----------->HVH21
          --------->AHL20(2)                           <-----------HVH21
          <---------AHL20(2)                  --------->ATHB12     ---------->DOF2
       <---------GLK1(2)                     <---------YAB1<---------TGA1a
       <---------ARR11(3)             <-----------GT1 --------->ALFIN1                        <-----
 
agattatacagattttattttttgctagggaacaagaggtttcacaaaatgatagaagtgtgacgtgggataaagaagatagagtgaccaagttggcctc  26030200
                                                     --------->ZAT2
                                                     <---------ZAT2
                                                     --------->At4g35610
                                                 <---------HSFB2a(2)
                                                 ------>ZmHOX2a(1)                                --
                                                 --------->HSFB2a(2)               ------>ZmHOX2a(1)
                                               ----------->RAV1(2)            <------MYB46(1)     --
                                             <---------ALFIN1                 <---------DEAR3(2)----
                                           <---------ATERF1(1)                <------MYB83      ----
                                           ------>NtERF2                     --------->MYB59  ------
                        ----------->GT1   <---------ALFIN1                   <---------MYB46(3) <---
               --------->AtMYB61         --------->MYB46(3)                  <---------DEAR3(1)-----
               <---------ALFIN1        --------->ANAC58               --------->ETT(2)       -------
              --------->MYB46(3)       --------->ANAC46               <---------MYB46(3)    --------
            --------->AtMYB61 --------->YAB1--------->bZIP60(2) --------->TOE2(3) --------->TOE1(2)
--------->STY1(2)  ---------->DOF2     --------->ANAC58  <---------ANAC46   <---------ORA47(1)------
<---------STY1(2) --------->AtMYB61--------->CCA1(2) <---------At4g35610 <---------AtMYB61  <-------
-NtERF2    --------->MYB46(3)<---------ATHB12--------->AtMYB61------->TEIL<---------MYB46(3)<-------
 
agtagctagttgctaccaccaccaaagaggtaatcaagagacgagccacctcctggagctgagtgaaccttggtcgatggtcggtcctgcgaacaacaac  26030300
<- Previous    Next ->

AGI:  At1g69220.1   
Description:  SIK1 (ERINE/THREONINE KINASE 1); kinase. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53165.2); similar to kinase [Arabidopsis thaliana] (TAIR:AT1G53165.1); similar to putative serine/ threonine kinase [Sorghum bicolor] (GB:AAM47579.1); similar to 36I5.3 [Oryza sativa (japonica cultivar-group)] (GB:AAG45491.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41850.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009)
Range:  from: 26023752    to: 26029834    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At1g69230.1   
Description:  SP1L2. similar to SP1L1 (SPIRAL1-LIKE1) [Arabidopsis thaliana] (TAIR:AT1G26355.1); similar to unknown [Populus trichocarpa] (GB:ABK94106.1)
Range:  from: 26030016    to: 26031371    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version