Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                              -------                                                                                              -------                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                     <---------DOF5.7(2)                                                                                   <---------MYB52(1)                                                                              <-----------GT1--------                                                                        <------NtERF2<---------At5g28300                                         <---------AtMYB61             --------->RAP2.6(2)--------->REM1(2) ----------->HVH21                    --------->ALFIN1        --------->TOE2(3)<---------At5g28300 --------->RAV1(2)                 <------ZmHOX2a(1)          <<<<<<<<<<<<<<<<<LFY --------->DOF5.7(2) >GT1   --------->ALFIN1        <------ZmHOX2a(1)--------->CCA1(2)    <---------RAP2.6(2) <----------   tacctgaagggtgaggctaacatggccttgaagaggaggagttgtggtgagaaacgagaggttaccacaatggccgcatttcaccgttaccgtgtcaagc  26012300                                                                                        --------->TOE2(3)                                                                                <---------AHL20(2)                                                                                --------->AHL20(2)                                      <-------TEIL                            --------->AHL20(2)                                    <---------GLK1(2)                         <---------AHL20(2)                                    --------->ARR14(2)                      --------->AHL20(2) ----ATHB12         --------->TOE2(3)--------->ARR14(1)                     <---------AHL20(2) -->ANAC58        -------->P        <---------ARR14(2)                    --------->AHL20(2) -->ANAC58        ------>MYB83      --------->ARR11(1)                   --------->AHL20(1) ->WOX13(1)       ------>MYB46(1) ----------->ARR10     ----------->GT1  <---------AHL20(1) -HVH21  --------->YAB1         --------->REM1(2)    --------->At4g35610--------->AHL20(2)   attctcttcaatggtatcccaacctatatatgtgtgtagattcggtttacaaattagctcgaaaatttgaagaaatatatatatatataacataaacaac  26012400                                                                                                <----                                                                                               <-----                                                                                           <---------ICU4                                                                                           --------->ATHB51                                                                                           <--------ATHB1                                                                                           --------->AHL20(2)                                                         <---------AHL20(2)          ----------->GT1                                                     --------->AHL20(2)              <------MYB46(1)                                               --------->ANAC58                      <------MYB83                  ------->TEIL                 --------->ANAC58                     --------->MYB59             <---------AtLEC2                  --------->AtLEC2       <---------ARR11(3)   <---------AHL20(2)        <---------ANAC58      --------->YAB1--------->WRKY18(1)       --------->ARR11(3)  <---------ATHB51        <---------ANAC58    <-----------GT1<-----------HVH21         <---------CCA1(2)    --------->ICU4   aatatgtatagcttagcatgtatgtgatattatcaacatatatagggtcatgcaagtatatatatgcttatatatcttcttatatgtaggtaataattta  26012500                                                                                --------->MYB52(2)                                                                                <------MYB46(1)                                                                                <---------MYB46(3)                                                                               <---------AtMYB61                                                                              <--------P                                                                            --------->ATHB12                                                                            <---------MYB46(3)                           --------->LBD16                               <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         <-----------RAV1(1) --------->SPL7                             <------NtERF2         <---------REM1(1) <---------SPL7                               <---------MYB52(1)         --------->ALFIN1  ----------->HVH21                           <---------RAP2.6(3)       <------MYB46(1)   --------->ANAC46                              <-----------TGA1       <------MYB83      <---------LBD16            <---------ANAC46   <-----------HVH21      <---------AtMYB61<---------ALFIN1          <----------DOF2      --------->RAP2.6(2)    <------ZmHOX2a(1)  --------->REM1(1)     <---------RAP2.6(2) ---------->DOF2<------MYB83 -----At5g28300 --------->At4g35610     <---------ARR11(3)--------->ANAC58 --------->ICU4       <---- ------GT1      <---------At4g35610     --------->ARR11(3)--------->ANAC58 <---------YAB1   <--------   ccgcgaggatggtgttgcagatgctacaccggacgtagtagagatgttcggcttgaggggaagcccttgaagccgtcatggttggtttctcttctaggtt  26012600                                                                      --------->REM1(2)                                                                --------->ARR11(3)                                                                <---------ARR11(3)    <----------DOF2                                         --------->At4g35610<---------TOE2(3) <---------ARR11(3)                                       --------->YAB1       <---------TOE1(3) ---TEIL                         ---------->DOF2   ---------->DOF2 <----------DOF2   <---------YAB1 -TOE1(2)        <---------WOX13(1)  ---------->DOF2    --------->GLK1(2) <---------ZAT6     <-------   catggtctttagcgaatggattgaaaaccgctcttgaaagaaagagagagagagaaagaatcagaagaactttgtagagttagggttatgcttattttat  26012700                           --------->YAB1          <-----------TBP                          <---------ATHB12         --------->AHL20(2)                      ------------>CBF             <---------AHL20(2)                  --------->HSFB2a(2)            <-----------TBP                  <---------HSFB2a(2)            --------->AHL20(2)                              <---        <---------ANAC46  <---------YAB1         <---------AHL20(2)                       --------->ALFIN1        <---------ANAC58  <<<<<<<<<ARR2        --------->AHL20(2)                         <----------        <---------ANAC58--------->WOX13(1)     <-----------TBP                        ---------->DOF2    <------ZmHOX2a(1) *TSS<<<<<<<<<ARR1      <-----------TBP                    <------------CBF <--- --AHL20(2)     <---------AHL20(2)      ----------->HVH21                       <---------GLK1(2)<---   gagttaggaggcttgtatttatagaacaatcatagtgagaccatgacatatatatatatagagagagagagagagcgatacagattgtcaaagtgttgga  26012800                         <---------YAB1                <------------CBF               --------->ATHB51               --------->ATHB12                                                     --------->TOE2(3)  <---------ARR14(2)     <---------AHL20(2)         <---------ARR11(3)            <---------ARR11(3)  --------->ARR14(2)    --------->AHL20(2)      <---------AHL20(2)                <---------ARR14(2) ------ANAC58  <---------ICU4                  --------->AHL20(2)                 --------->ARR11(3) -RAV1(1)     <---------ATHB51         <-----------GT1        --------->YAB1     --------->RVE1(1) ------ANAC46 <---------YAB1         <---------AHL20(2)      <---------YAB1     ------->TEIL ------ANAC58 --------->ICU4     <---------AHL20(2) --------->ARR11(3)   --------->AHL20(2) <--------   cgtgtatatgcagtccataattgcatttttattgtttattttaacaacatttaatatcatcttatcaaaaaaaaaaaaaatgaatatcttaaactaatga  26012900                                                                                               <-----                                                                                               <-----                                  <---------ANAC46  ---------->ID1                        <---------MYB52(1)                                  <---------ANAC55(2)  <---------MYB52(1)       <---------ANAC55(2)                                  --------->ANAC55(2)<---------ANAC58           <---------ANAC46    <---------REM1(1)             <---------ANAC55(1)<---------ANAC58           <---------ANAC55(1)<-    <---------ANAC46           --------->ICU4       --------------->AtSPL8      --------->ANAC55(2)<- <-----------RAV1(1)    ----------->GT1            <-----------GT1    ---------->DOF2    <-------GAMYB -ICU4                  --------->YAB1     <----------DOF2<----------DOF2    --------->ICU4<---------TOE1(2)   cttctggtgtagacacgagtttctaatggtgacattatgtgttttcttttttttttcgttctttttttttgttaaagacattatgtgttttcgttggata  26013000         <---------AHL20(1)         <---------ARR11(3)                                                                        <- <---------ANAC58                                                                           <-------- <---------ANAC58                                                                         --------->ARR14(2) ----CCA1(1)                                                                --------->ARR11(3)    --- ----RVE1(1)                                 ----------->GT1                <---------ARR11(3)------- --------AHL20(2)                         ---------->DOF2                  --------->YAB1 <---------ARR14(2) ----------GT1                --------->At5g28300            <------ZmHOX2a(2)      --------->TOE2(2)   tttacttgctatatattctattttgtaatcactgtaaatgttttaaaagataaaacaaattggatcaacaagttcgatgatattaatctacgtttccgca  26013100                                           --------->At4g35610                                           <---------At4g35610                                           --------->ZAT2                                  <---------bZIP60(1)               ---------->DOF2    --------->bZIP60(1) --------AHL20(2)    <----------ID1        <---------ZAT2   --------->ANAC58 -LBD16<---------LBD16     --------->AHL20(2)  <---------STY1(2)      <---------YAB1 ------>AHL20(2)     ----------->GT1<---------YAB1          --------->ANAC58 ------->TEIL          -- -->LBD16   --------->CCA1(2)   --------->YAB1 --------->STY1(2) <---------ICU4               -------   taaaatttctctggatataaagaaggaaaaaaaatgatatcattaagctggctagggattgcaagaaaaattacaaatgtatattaaactgatatttaga  26013200  Previous    Next  AGI:  At1g69180.1    Description:  CRC (CRABS CLAW); transcription factor. Identical to Protein CRABS CLAW (CRC) [Arabidopsis Thaliana] (GB:Q8L925;GB:Q9LQA3;GB:Q9XHD1); similar to YAB5 (YABBY5), transcription factor [Arabidopsis thaliana] (TAIR:AT2G26580.2); similar to YAB5 (YABBY5), transcription factor [Arabidopsis thaliana] (TAIR:AT2G26580.1); similar to transcription factor CRC [Brassica juncea] (GB:AAZ23116.1); contains InterPro domain YABBY protein (InterPro:IPR006780); contains InterPro domain High mobility group box, HMG (InterPro:IPR009071) Range:  from: 26011128    to: 26012722    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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