Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              ----------->HVH21                          <------MYB46(1)                          <---------ANAC58                          <---------ANAC58                          ----------->GT1                          <------MYB83                         <---------DEAR3(1)                                 <---------DEAR3(1)                         <---------MYB46(3)                        <---------WRKY12         ---------                         --------->MYB52(2)                      <-----------HVH21--------->ZAT18                       --------->ARR14(2)                        <---------ARR11(3)   --------->MYB52(1)                       <---------ARR14(2)                  ------>MYB46(1) <---------------------WRI1                       <---------MYB52(1)                  ------>MYB83  --------->ZAT2  ------->GAMYB             ------->TEIL--------->MYB46(2)              <---------MYB59 <---------ZAT2 --------->ANAC46 ------->MYB52(1)<-----------HVH21  <-------TEIL   <---------------------WRI1<---------ANAC46      <-   ccaagggtcgaaatgaatcggtccggttcggtgacatatacataagttgagttggagaaccaaacaaggtcatcgagctcggtgtgaacaacggcatatc  25665500                                          --------------------->WRI1                                         <------NtERF2                                         --------->ATERF1(1)                                        <---------RAP2.6(3)                                        ------>NtERF2                                       --------->RAP2.3(2)                                       --------->RRTF1(3)                                       --------->RAP2.6(2)                                       --------->DEAR3(1)                                       --------->RAP2.3(3)                                      <------NtERF2                                      --------->MYB46(3)                                      --------->DEAR4(2)                                      --------->ORA47(2)                                      --------->RAP2.6(1)                                      --------->ERF1                                      --------->ATERF1(1)                                      --------->RAP2.3(1)                                      --------->RRTF1(1)                                      <---------ABI4(2)                                      --------->DEAR3(2)                                     --------->ZAT2                                     <---------RAP2.3(1)                 <-----------HVH21                                     --------->At4g35610                --------->ANAC46                                     <---------ATERF1(1)     --------->DOF5.7(2)                                     --------->ABI4(2)   ------>NtERF2  --------->ANAC55(2)                                     ------>NtERF2       <---------ALFIN1<-----------TGA1                                     <---------At4g35610----------->HVH21--------->LBD16    ---------            <---------MYB52(1)      <---------ARR14(2)  --------->ANAC46<---------ANAC58    <--------           <-------GAMYB            --------->ARR14(2)  --------->DEAR3(1)       ------->GAMYB<------       <-----------RAV1(1)       --------->ANAC46 --------->YAB1        <---------ANAC58  ----------- ->TaMYB80<---------MYB46(3)   --------->MYB52(1)<---------YAB1<---------DOF5.7(2)      <------ZmHOX2a(1) --------MYB52(1)        ------>ZmHOX2a(1)<---------ANAC46  --------->TOE2(3) ----------->RAV1(1)   agttaacttctgtcgttgtgttctatcctgactaaacggagccgccgtgttatcatccccgacgttaacctcttccgtcacaacagaagaggaagattca  25665600                                                                            <------ZmHOX2a(2)                                                                        --------->ALFIN1                                                                      --------->ALFIN1                                                                    =======================bZIP_DOF                                                                    --------->TGA1a                                                                    <---------TGA1a                                                                    <---------ANAC58                                                                    <---------O2                               <---------MYB52(1)                   --------->O2                              <-----------TGA1                      <---------ANAC58              <---------ICU4  <-----------HVH21                     <---------ANAC46      <---------ANAC46       --------->ANAC58                      <-------MYC3      <---------ANAC58       --------->TGA1a                       ------->MYC3      <---------ANAC58       --------->ANAC58                      ------->MYC2 <---------ZAT6        <---------HSFB2a(2)                         <-------MYC2             <-------- >ARR14(2)    --------->YAB1 --------->O2                         --------->ANAC58          <-------- -ARR14(2) --------->YAB1    --------->bZIP60(2)                  --------->ANAC58          <-------- -TEIL<---------ANAC55(1)    --------->ANAC46                   <---------ALFIN1<---------DAG2 >ARR10--------->LBD16 --------->HSFB2a(2)                   --------->ANAC46   <----------DOF2   ctagtgttccgtctaataatctcgtctagacccgtcagcctttgaaccagggccatgaagtcttcggcacgcgtgtggatcacttttggagaatgcgcgt  25665700                                                                               --------->LBD16                                                                               ------>NtERF2           <---------GLK1(1)      <---------ANAC58                      <---------GLK1(2)           --------->GLK1(1) <---------ANAC58                           --------->ARR14(2)           --------->At4g35610    <---------ANAC58                      <---------ARR14(2)           <----------TaMYB80<---------MYB46(3)                     --------->ALFIN1      <---------LBD16    <---------AtMYB61                        --------->ALFIN1     --------->MYB52(1)  --------->ALFIN1                         <---------ANAC58 --------->YAB1         ------->MYC3                              <---------ANAC46 -ANAC46   <---------At4g35610    <---------ANAC46        <---------ANAC58    <---------DEAR3(1)   == -ANAC58  --------->ARR14(2) <---------ANAC58             <---------ANAC58   <---------LBD16       <- -ANAC58--------->LBD16 <-------MYC3        <---------AtLEC2      <---------ANAC58         <---------   agatgataaccggagatgcccgtccatgtggtcgtggcttcgacttgcaagacgacgttttcttgatggtgtgggattctccggcgagttttagcgacga  25665800                                           --------->At4g35610               ------>ZmHOX2a(2)           ----------->GT1             <---------ARR11(3)            <------MYB83           --------->WRKY12                <------MYB46(1)          <---------MYB52(1)              --------->MYB111(1)        <---------MYB46(3)                --------->MYB46(2) <---------TGA1a                          --------->MYB111(2) <---------ANAC46                         --------->MYB55(2) <---------ANAC58                         <---------MYB46(3)                     ---------->DOF2 <---------ANAC58                        <---------MYB55(1)                    --------->ANAC58 <---------O2--------->ARR11(3)          <--------P                            --------->ANAC58 --------->TGA1a       ------->TEIL   <---------YAB1                        <------ZmHOX2a(2) =================================================MYC_MYB                   <XXXXXXXXXXXXXXXXXXXXMIR396B =====================HOX2a_HOX2a   --------->YAB1<---------ARR11(3)       --------->ARR11(3) -----ZmHOX2a(1)<---------YAB1      <---------ICU4--------->ARR11(3)       <---------ARR11(3) ------- -ID1 <---------At4g35610          --------->ICU4 --------->AHL20(1)   ---------->DOF2<----------DOF2   aggacgtgagccgttgatctcattgcatcttgttggaatcatggtaggtgaatatatcaagagaatggagaatgaaagatcaagaaagctttgaaaataa  25665900                                                                                               ------                                                                                              <------                                                                                            <--------                                                                                          --------->MYB52(1)                                                                                        <---------MYB52(2)                                                                                 <------------CBF                                                       ----------->GT1         <---------AHL20(2)                                                      <---------YAB1           --------->AHL20(2)                    --------->ANAC55(2)            --------->ICU4              <---------AHL20(1)                    <---------ANAC55(2)     <---------ANAC46                   --------->AHL20(1) ---   --------->ARR11(3)  ------->TEIL         <---------ANAC58         <---------AHL20(2) --------->MYB46(3)  --------->GLK1(1) <---------ANAC46        <---------ANAC58        <---------AHL20(2) ------>NtERF2  *TSS              <---------ANAC55(1)     <---------AtLEC2        --------->AHL20(2) <---------At4g35610 -->AHL20(2)  --------->AHL20(2)            <---------ANAC55(1) --------->AHL20(2)     --------->At4g35610   acagagttcttgttgatataatacgtatatatgtagaattacatttgcgtgtaagtatggttaaaactaaataaatcgtattttattgcagccaacgatt  25666000                                                                                                    <                                                                                                   <-                                                                                                   --                    <---------TOE2(3)                                                           <----         <----------DOF2                                                                       ------     --------->WRKY38(1)                                                                       <-----     --------->WRKY12                                                                    ------>ZmHOX2a(1)     --------->WRKY45<---------YAB1                               --------->YAB1     <---------ARR14(2)    --------->DOF5.7(2)                                        <---------ZAT6        --------->ARR14(2)    <---------MYB52(1)                                <-------GAMYB                  --------->ARR11(3)   <-------GAMYB   <-----------GT1                   <---------MYB46(3)             <---------GLK1(1) --->GLK1(2)   <---------AHL20(2)                <---------MYB52(1)                 <---------CCA1(2) ---GLK1(2)   <---------AHL20(2)                <-------GAMYB----------->GT1  <-----------RAV1(2) <-- -ATHB12 <---------DAG2                        <---------MYB46(3)<---------YAB1    ---------->TaMYB80 -------->HVH21--------->AHL20(2)   ----------->GT1  <---------ANAC46<-----------GT1--------->GLK1(1)   ctgaccgttgactttatttatttacgattacagttttatagtaaaacggccgttgtcgttgaatagtattataacatgcctcaggtatatcctgttgatt  25666100                                  --------->ARR14(3) ---------AHL20(2)                <---------ARR14(3) --------AHL20(2)                 --------->GLK1(2) ------->AHL20(2)                 <---------ARR14(2) -----ICU4                        --------->ARR11(3)                 <---------ATHB12 --->ICU4                         <---------ARR11(3)                --------->ANAC58  <---------DAG2 ----YAB1                     <------NtERF2                 <---------AHL20(2)<----------DOF2 -------YAB1                 ----------->GT1    <----------DOF2     --------->ANAC58  <----------DOF2   attaatttctaacacatcaaaaactcaagggccgaaaatcttgaattgctctttttttatatgaaattgcaagcattcccctttgcaacttttccacttc  25666200                                                           <---------YAB1                                                          <---------AHL20(2)                                                        <---------AHL20(2)                                                        <---------YAB1                                                       --------->AHL20(2)                  <---------                                                       --------->YAB1                 <<<<<<<<<<WRKY43                                                       <---------AHL20(1)             <<<<<<<<<<WRKY38                     --------->ANAC46        <---------AHL20(2)                       <<<<<<<<<<WRKY26                   ---------->DOF2           --------->AHL20(2)                     <------MYB83 <---        --------->AHL20(2)                   <---------AHL20(1)                     <------MYB46(1) <       <---------AHL20(2)                    --------->AHL20(1)      <---------At4g35610 <---------YAB1      --------->AHL20(2)  <----------DOF2   --------->AHL20(2)<---------AtMYB61    --------->MYB59 <-   ttcaaaaatttaaaatatagttcaagcgattttagttatttcagaaataaattgcaatattattttggtggagatgtcttcatatttggtcatctttgaa  25666300                             <-----------RAV1(2)                            <------NtERF2                            <---------At4g35610                         --------->At4g35610                         <---------At4g35610                        --------->MYB52(2)                            --------->YAB1                        <------MYB83                            --------->ANAC46                        <---------MYB46(3)                      --------->ANAC55(2)                        <------MYB46(1)                         --------->ANAC58                      <--------P   <-------GAMYB                <---------ANAC55(2) -DOF2   ----------->HVH21  --------->At4g35610 <-----------GT1 --------->ANAC58 --------->YAB1 ------ICU4    --------->ANAC58   ----------->GT1               --------->ANAC55(1) -----------GT1--------->AtLEC2   <---------MYB46(3)           <---------TOE2(3)<---------YAB1 --------YAB1  --------->ANAC58<---------At4g35610         <----------DOF2   <---------AHL20(2)  ----   tattactggctgtgaccatgcaaggttggctgcagatggttgaaatggatttacttctctccttttacgtaataagaaatttatgaaaatgttcaaaact  25666400  Previous    Next  AGI:  At1g68450.1    Description:  VQ motif-containing protein. similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT3G18360.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73469.1); contains InterPro domain VQ (InterPro:IPR008889) Range:  from: 25665164    to: 25665902    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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