Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------YAB1            <---------ICU4            --------->YAB1            -------->ATHB1           --------->ICU4           --------->AHL20(2)           <---------AHL20(2)                                                                       -     <-----------HVH21                                                                             <-    ----------->GT1     <----------DOF2                                                      --------  --------->ZAT2<---------AHL20(2)                                ------------------------>ANAC81----  --------->At4g35610   <---------DAG2                   <---------YAB1                      --------  <---------At4g35610<-----------GT1                  <---------YAB1                         <------- ----->YAB1<---------ATHB51                         <---------CCA1(2)                       ---------   tatgagctgtcaaattattattttgactttatgagttgtcatattatacatagcatatcattcttaagaaaaacaaaaacaaaaacaaaaacaaaaaaat  25661300                                         <---------YAB1                                        --------->AHL20(1)                                       <---------ICU4                                       --------->ATHB51                                       <--------HAHB4                                       --------->AHL20(2)         --------->ARR14(1)     ------>MYB83        --------->ARR14(2)      ------>MYB46(1)        <---------ARR14(2)    --------->MYB46(3)                               ----------->GT1       --------->YAB1         --------->AtMYB61  ------>NtERF2              <------------ATHB5      <---------ATHB12       --------->MYB46(3) --------->ANAC58            <--------ATHB1  <---------YAB1          <---------MYB55(2)    --------->ANAC58            <---------ICU4 --------->TOE2(3)        --------->MYB46(3)    --------->ANAC46            --------->YAB1 -------->YAB1          <-----------GT1<---------AHL20(2)                   --------->ATHB51 --------YAB1       --------->DAG2     --------->YAB1                       -------->ATHB1 ->AHL20(2)        ---------->DOF2     -------->ATHB1                      --------->ICU4 ----------- ----->YAB1   <---------------AGL15   --------->ICU4                       <---------ATHB51         - ->AHL20(1)   --------------->AGL15   <---------ATHB51                     <---------ATHB12        -- --AHL20(2) --------->At4g35610----------->RAV1(1)              --------->TOE2(3)         <----------ID1 >AHL20(2)------>ZmHOX2a(2)------->GAMYB<---------AHL20(2)      --------->TOE1(3)       ---------->DOF2   tatcatcaatgatccgcttcataaagtaaccaccaacacaattattttggacgcctcaaatccaaaccttattttcaataattgtgaaaaaaaagaaaaa  25661400                   <---------MYB46(3)                   --------->MYB55(2)                  <---------------AtSPL8                  --------->ALFIN1              <---------ICU4                <------MYB83  --------->ANAC58  --------->YAB1                <------MYB46(1)             <---------YAB1               --------->MYB111(2)        --------->YAB1               --------->MYB111(1)    --------->AHL20(2)               <---------MYB46(3)    --------->AHL20(1)                             <---------AHL20(2)               <---------AtMYB61     --------->ARR11(3)--------->ANAC46            <---------AHL20(2)               --------->MYB55(2)    <---------AHL20(1)--------->ANAC58         <---------AHL20(2)               --------->MYB46(2)    <---------ARR11(3)--------->ANAC58         --------->AHL20(2) >GT1      <---------TOE2(3)  --------->ANAC58 <---------YAB1                  <---------AHL20(2) -------->DAG2<--------P   --------->MYB46(3)--------->YAB1                 --------->AHL20(2) -------->DOF2<---------MYB55(1)    --------->YAB1    ------->GAMYB        <---------YAB1   aaaaagctatattgtggtaggtggttcgaaccactcaaaaatatttatgataataacacccaaaaacaaactaaactattatttatttattgtggtcatg  25661500                                                                                      <-----------RAV1(1)                                                                                      --------->ALFIN1                                                                                    --------->ANAC55(2)                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                  --------->ZAT2                                   <---------TOE1(2)                                  <---------ZAT2                              <-----------GT1                                  <---------At4g35610              ------>ZmHOX2a(1)<---------ANAC58                                  --------->At4g35610  <----------DOF2    <----------DOF2                               ---------->DOF2     <---------CCA1(2)     <---------DAG2     ---------                          <-----------HVH21    ------->TEIL    --------->ARR14(2) ------>ZmHOX2a(1)                       <---------At4g35610    <---------CCA1(2)<---------ARR14(2)--------->TOE2(2)   agatagttacagacacagagaatacatctgtcagaaagctgactcattgtatcttatctttcccatttcctcttaccttttttcctacgtgttgccacaa  25661600                              <-------MYC3                              ------->MYC4                              <-------PIF5                              ------->MYC2                              <-------MYC2                              ------->PIF5                             --------->O2                             <---------ANAC55(2)                             <---------ANAC46                             <--------ABF1                             --------->TGA1a                             ========================================bZIP_DOF                            ------>NtERF2                           <------------OsbHLH66                         ------>NtERF2                         <-----------HVH21                         --------->LBD16                        --------->ANAC46                        --------->ANAC58                        --------->ANAC58                <---------ATHB12                ------------>CBF               --------->ANAC46 <---------ZAT18                            --------->ANAC58               --------->ANAC58 --------->ZAT18                 <---------TOE1(3)               --------->ANAC58 --------->ZAT14           <----------DOF2  --------->ANAC58              ------>MYB46(1)<---------O2             <------MYB46(1)    <---------ALFIN1              ------>MYB83 <---------ALFIN1           <------MYB83 <---------ANAC58             <---------ALFIN1<---------TGA1a         --------->MYB59   --------->HSFB2a(2)            <---------MYB55(2)------->MYC3          --------->ZAT14<---------ANAC58      <---------ICU4   <---------LBD16             <---------MYB52(1)  <---------HSFB2a(2)      *TSS< -->RAV1(1) --------->MYB46(3)<-------MYC4    <-----------HVH21 <---------TOE2(3)        <---------CCA1(2)   aactctcatcttcacccactcaatctccgccacgtgtactctctaacccttcagttcggtctttttaaggcttccccaagccttcgcatccaaatctctc  25661700                                                                                          <---------WOX13(1)                                                                                  --------->MYB52(1)                                                                        --------->ICU4  <---------MYB46(3)                                                                 <---------ZAT14 --------->ARR14(2)                                               ------>MYB46(1)   <---------At4g35610  <---------MYB52(1)            <----------DOF2   <----------ID1   ------>MYB83      --------->At4g35610 --------->LBD16       <-----------GT1 ------------------------>ANAC81   <-----------GT1--------->GLK1(2) <---------YAB1     <-----------GT1  <----------ID1         <---------MYB59<----------DOF2      <---------ARR14(2) ----------DOF2  --------->YAB1              --------->TOE2(3)   --------->ZAT14<---------SPL7   ttctttttttctctctttctcataacaacaaaaaaacaaaaaaaaaacctaattagttttttctttctgcagagattatggaggtaccggtgattaatag  25661800                                                                     --------->HSFB2a(2)                                                                     <---------HSFB2a(2)                                                                     --------->ANAC46                                                                     --------->ANAC55(2)                                                                    <---------LBD16                                                                    ----------------->AGL2                                                                    <-----------------AG                                                                    ----------------->AGL1                                           <---------MYB52(1)       <-----------------AGL1                                        <---------TOE1(2)         --------->ARR14(2)                                       ========================HOX2a_HOX2a      --------->ANAC58                                       ------>ZmHOX2a(1) <-----------RAV1(1)    --------->ANAC58                                     ------>ZmHOX2a(2)  ------>ZmHOX2a(2)     ---------->DOF2                                   --------->ARR11(3) <---------ARR14(2)--------->ARR14(2)                ----------->GT1    <---------ARR11(3) --------->ARR14(2)<---------GLK1(2)       <----                <------MYB46(1)   --------->YAB1      <---------AGP1<-----------------AGL2------>MYB46(1)                <------MYB83      -------->HAHB4   --------->HSFB2a(2)  <---------ARR14(2)------>MYB83      --------->GLK1(1)         <---------TOE2(3)  <---------HSFB2a(2)--------->LBD16  --------->ANAC46     --------->ARR11(3)        --------->YAB1  <----------DOF2    <---------ARR14(2) --------->REM1(1)   aataagagatttcgaagttggtataaactcgattaatgatccttcgtttctttctcgatctgttgctgtttccggaatcggaaagctacaccaagcttat  25661900                                                                                          >>>>>>>>>>GT-3b                                                                                       ----------->GT1                                                                                       <---------TOE2(3)                                                                                  ----------->GT1                              --------->GLK1(1)             --------->ZAT14       <------MYB83                       <---------ICU4              <----------DOF2               --------->MYB59                      <---------YAB1             ------>MYB46(1)     ------->GAMYB<------MYB46(1)                   <---------YAB1                ------>MYB83  --------->ANAC46<---------MYB52(1) -----TOE1(3)    <----------DOF2            <-----------GT1 <---------ZAT18  <---------MYB46(3)   ggtttttggaaatggggagctttgattatcgcatttctagcttatttcaccaactttgttagtaaactcaacagtctagttgttaggttaagaaaaatag  25662000                                                      <---------ANAC46                                                      <---------ANAC58      ----------->HVH21                                  <---------YAB1      <---------ANAC58      ----------->TGA1                             <---------ICU4       --------->HSFC1(2)      --------->At4g35610                             --------->ATHB12     <---------HSFC1(2)      <---------At4g35610                            <---------YAB1 --------->GLK1(2)              ------>ZmHOX2a(1)                     <----------DOF2       <---------ARR14(2)         --------->ARR14(2)<----------ID1           ------>ZmHOX2a(1)--------->ICU4 --------->ARR14(2) ------>ZmHOX2a(1)       ---------->DOF2   atgtctctgtttcctctccaactctttttgatgattacgatagcgattccgatgtttcttgttcctctaccgtctcctctgacgatgaaaaagacgaaga  25662100                                                                               <------ZmHOX2a(2)                                                                    --------->LBD16                                                                  <---------LBD16                                                                --------->ARR14(2)                                                               --------->GLK1(1)    <---------YAB1                                                               <---------GLK1(1)    --------->ICU4                                                              --------->HSFC1(2) <---------YAB1                                                              <---------HSFC1(2)------>ZmHOX2a(2)                                                            <---------TOE2(2) --------->ARR14(2)                                                        --------->At4g35610   --------->ARR11(3)    -                                    ------>ZmHOX2a(2)   <---------At4g35610   <---------AGP1 --------                                  --------->ARR11(3)   --------->MYB52(1)     --------->GLK1(2)    <-                      <------ZmHOX2a(1)<---------AHL20(2) ------->GAMYB       <---------ARR14(2) ----                      =====================HOX2a_HOX2a <---------DOF5.7(2)    <---------ARR11(3)<----                    <---------TOE2(3)<----------DOF2  <---------WRKY12        <-----------ARR10 -----         <---------YAB1           <---------ARR11(3)  <---------WRKY45<-----------HVH21   <---------YAB1         --------->ICU4--------->ARR11(3)             <---------WRKY38(1)    <------ZmHOX2a(1)-------       <---------At4g35610 --------->WRKY38(1)      <-----------HVH21 <----------DOF2<---------ICU4--   agatgaggctgatgatgaagatgaggatgttgactcgatctttaatcgaagacgagtcaacggaggtttccgcgttagaggatctgattattacgatgat  25662200  Previous    Next  AGI:  At1g68440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G25400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42150.1) Range:  from: 25661696    to: 25662936    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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