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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                        --------->YAB1
                   <---------AHL20(1)                                                             <-
                   <---------AHL20(2)                                                             <-
                   --------->AHL20(1)                                                             <-
                  --------->YAB1                                                          <---------
                  --------->AHL20(2)                                                   --------->YAB1
                 <---------YAB1 ---------->DOF2     <---------YAB1              <---------At4g35610
      ---------->DOF2  <-------TEIL     <---------YAB1   <-----------GT1       ------->TEIL       --
 
agcattacaaaaagacgactattatattcatgagtcaaagtttataaatgaaattacgaataactatatatgagttttgttgaatctgactaataacatg  25569200
          ----------->GT1
    <---------TOE2(3)
   ---------->DOF2
--------------AGL15                     --------->ATHB12                                 --------->AHL20(2)
--------DAG2<<<<<<<<<<WRKY63           --------->ICU4                                    <---------AHL20(2)
---------DOF2    <---------ATHB12    <---------ICU4                                     --------->AHL20(2)
--GT1   --------->ZAT14              --------->YAB1                                     <---------AHL20(1)
------------->AGL15    --------->AHL20(2)    <-----------GT1                            <---------AHL20(2)
 
actttttaaagtatagtcaaatgatttttaatattactaaaaatgatttaactatatacaaattcaattttgtttttaaaaaacttgtcaatttaattac  25569300
                                                                                       <---------AHL20(1)
                                                                                       --------->AHL20(1)
                                                                                      --------->YAB1
                                                                                      --------->AHL20(2)
                                                                                      <---------AHL20(2)
                                                                                     <---------YAB1
                                                                                   --------->YAB1
                                                                                   <--------ATHB1
                                                                                   <--------HAHB4
                                                                                   --------->ATHB51
                                                                                   <---------ICU4
                              ----------->GT1                                     <---------ATHB51
                 --------->ARR11(3)                                      <---------YAB1<---------AHL20(2)
                 <---------AHL20(1)                                      --------->AHL20(2)
                 <---------ARR11(3)                                      <---------AHL20(2)
                 --------->AHL20(1)      --------->MYB46(3)             <---------AHL20(1)
               <---------ARR11(3)      --------->ANAC46                 --------->AHL20(2)
               --------->AHL20(1)  <---------ARR14(2)                   --------->AHL20(1)
               --------->ARR11(3)  --------->ARR14(2)       <---------GLK1(2)     --------->ICU4
               <---------AHL20(1) <---------CCA1(2)         <---------ARR11(3)    <---------ATHB12
        ----------->GT1<-----------GT1 --------->ANAC58     --------->ARR11(3)    --------->AHL20(2)
    <---------YAB1  <---------AHL20(2) --------->ANAC58   ----------->ARR10   ------------>CBF
 
agaaactatgactgtgaaaatatttttttcaaactgtatatccagccactaggtgtttgataagattttgaaaaatataatttcaataattatattttag  25569400
                                                   <---------AHL20(1)
                                                   --------->AHL20(2)            <---------ARR11(3)
                                  --------->ICU4   <---------AHL20(2)            --------->ARR11(3)
                             ----------->GT1  <---------AHL20(2)                 --------->AHL20(1)
                    --------->AHL20(1)        --------->AHL20(2)    --------->ATHB12
                    <---------AHL20(2)       --------->AHL20(2)    --------->AHL20(2)
                    --------->AHL20(2)       --------->YAB1        <---------AHL20(2)
                    <---------AHL20(1)  <---------YAB1     ---------->DOF2 <-------TEIL
                   --------->AHL20(2) --------->YAB1<---------AHL20(2)<---------WOX13(1)
   <-----------GT1 <---------AHL20(2)--------->ICU4--------->AHL20(1)<------------CBF              <
 
acttaatatccatttttaaaaaataaattagaaggtcaaaatgatgaattaaaatttattcagaaagacattaattgatacatatatattcttcatacgt  25569500
                                                             --------->ANAC58
                                                             --------->ANAC58
                                                             --------->ANAC46
                           <---------ZAT18             ----------->HVH21
                           --------->ZAT18         <---------AHL20(2)                      <--------
                          --------->TCP16(2)     ----------->TBP                           ---------
     ------------>CBF    <---------TCP16(1)   ------>ZmHOX2a(1)                 --------->TOE2(3)
---------YAB1            <---------PCF5      --------->TOE2(3)             <----------DOF2<---------ATHB12
 
ctattatttgcaatgtatgacttatttgggtccactatttctatccatccttatatatatgaccacgcattagtatttctttatctcaacttaatcatct  25569600
                                                                           --------->ARR11(3)
                                                                           <---------ARR11(3)
                                                                          --------->YAB1
                 <---------AHL20(2)                                    <---------At4g35610
               <---------AHL20(2)       <---------ICU4                --------->ICU4
              <---------AHL20(1)       <------ZmHOX2a(2)            --------->At4g35610
           --------->YAB1              =============================HOX2a_HOX2a
          <---------ATHB12            --------->ARR11(3)            <---------At4g35610
-ICU4   --------->WOX13(1)            <---------ARR11(3)     ------>ZmHOX2a(1) <-----------GT1
>YAB1 ------------>CBF               --------->GLK1(1) ----------->ARR10 <---------YAB1------>ZmHOX2a(1)
 
tcttaaaccctcaatcatatatttttgtgaaaatttacagagatcatggctggatgcttagttcctgaatgtgctgatgatatttccatcctgctaatcg  25569700
                                                                               <---------ICU4
                                                                               --------->ATHB51
                                                                              <---------YAB1
                                                                           --------->LBD16
                                                                          --------->ANAC58
                                                                          --------->ANAC58
                                                                         <---------LBD16
                                                                       ------>MYB46(1)
                                                                       -------->P
                                                                     --------->AtMYB61
                                                                     <---------MYB55(2)
                                                               --------->GLK1(2)
                                                          ---------->DOF2------->GAMYB
                                                   --------->DAG2    <---------MYB59
                                                  ---------->DOF2   --------->MYB46(3)
                   <---------CCA1(2)            --------------->AGL15<---------MYB111(1)
                 <---------ANAC58               <---------------AGL15<---------MYB111(2)
            --------->WOX13(1)                 ----------------->AGL1--------->MYB46(3)
----------->HVH21<---------ANAC58    --------->REM1(1) ----------->GT1 ------>MYB83              ---
 
accatgacactgcatcaatcgcgtctctcacatcaatgcttcaacaattttcaaaaagaggtaaagaatcgaccaacccgcataattgtttttttttttc  25569800
                         <---------AHL20(2)
                     <---------AHL20(2)
                     --------->AHL20(2)                                                    <--------
                    <---------AHL20(2)                              <---------ZAT18        <--------
                 --------->AHL20(2)                       --------->TOE2(3)             <---------AHL20(2)
                <---------YAB1                      <---------AHL20(2)                 --------->AHL20(2)
              --------->YAB1                        --------->AHL20(2)            --------->AHL20(2)
------->ID1  --------->ICU4                  ----------->GT1    <---------ICU4----------->GT1   ----
 
gtcgtttatactagcattgattatttattttttcattcacatatcaaattgttaaaaaaattcttaatttttgcacttgttctgttaaaattttataatt  25569900
                                                                                               <----
                                                                                        --------->ANAC58
                                                                                        --------->ANAC58
                  --------->AHL20(2)                                                    --------->ANAC46
                  <---------AHL20(2)                                                <------ZmHOX2a(2)
                 <---------WOX13(1)                                                <---------ARR11(3)
               --------->ATHB12                                                <-----------GT1------
              --------->ICU4                                                   --------->YAB1 ------
              <---------YAB1                                                --------->WOX13(1)<-----
            --------->YAB1                                                 <---------AHL20(2) <-----
           --------->ICU4                                                  --------->AHL20(2)-------
-AHL20(2)--------->YAB1                                           <------ZmHOX2a(2)--------->ARR11(3)
-YAB1--------->AHL20(1)                   <---------MYB46(3)     --------->ARR11(3)--------->ARR14(2)
------->GT1<---------YAB1              <-----------RAV1(1)       <---------ARR11(3)<---------ARR14(2)
 
tgttaaaacatattatgatgattaattctaaatctcttgatactgtggtttatgcattgtattgatacgatctaagaattaatcacgatctacgaaatta  25570000
                                                                                             <------
                                                                                        <--------ATHB1
        --------->TOE2(3)                                                               --------->ATHB12
     --------->GLK1(1)                                                            ------>ZmHOX2a(2)
     <---------GLK1(1)                                                           <------ZmHOX2a(2)
-----AHL20(2)                      <---------At5g28300     --------->CCA1(2)    <---------ARR11(3)
--->AHL20(2)         --------->AHL20(2)                   <---------ARR11(3)    <---------AGP1 -----
--->AHL20(1)         <---------AHL20(2)                   --------->ARR11(1)    --------->ARR11(3) <
----AHL20(1)       --------->CCA1(2)                  ---------->DOF2          <---------CCA1(2)----
----AHL20(2)      <---------ARR11(3)            <---------ANAC55(2)     <------MYB46(1)--------->ICU4
-->AHL20(2)       --------->ARR11(3)        <-----------HVH21           <------MYB83   <---------ATHB12
 
atttgaagaaatctcaaataagatataaatgtataaatcacagtgtttgtcacataaaaaagatttgaagctatttggtcttagatctcaatgatttaac  25570100
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AGI:  At1g68210.1   
Description:  APRR6 (PSEUDO-RESPONSE REGULATOR 6); transcription regulator. Identical to Putative two-component response regulator-like APRR6 (APRR6) [Arabidopsis Thaliana] (GB:Q9C9F6); similar to ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14), transcription factor/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT2G01760.1); similar to TPA: response regulator [Oryza sativa (japonica cultivar-group)] (GB:FAA00259.1); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain CheY-like (InterPro:IPR011006)
Range:  from: 25569646    to: 25572965    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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