Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           ----------->HVH21                                                                                       --------->MYB52(2)                               ----------->GT1                                       <---------MYB52(1)                            ---------->DOF2      --------->ANAC58                ------>MYB46(1)                           <---------AHL20(2)    --------->ANAC58              <---------ALFIN1                    --------->ARR11(3)  --------->TOE2(3)                      --------->AtMYB61                    <---------ARR11(3)  --------->TOE1(3)                      --------->DEAR3(1)      <---------AtLEC2 <---------------AGL15     --------->ANAC46             --------->MYB46(3) --DAG2            <---------CCA1(2) <-----------GT1  --------->ICU4      <-----------HVH21 ---DOF2   ------->TEIL--------------->AGL15<---------YAB1     --------->GLK1(2) ------>MYB83   tttttttttcatgaaacttatatatctattaaaagtttaaaaccttattatacgaaatgtttgagaatctattatctgtcaccacccgtttgtgaccaga  25555200                                                                                                 ----                                                              <----------DOF2                    ----                                                              <---------DAG2                  -------                                                <---------AHL20(2)                           <-------                                                --------->AHL20(2)                      <---------ARR11(3)                               <---------ZAT6   <---------AHL20(1)                      --------->ARR11(3)                             <---------ANAC46<---------AHL20(2)                        <---------CCA1(2)         ---------->DOF2   <---------ZAT14   --------->AHL20(2)  <---------YAB1   ----------->HVH21   gagtagatttctaaagtgttttggataagtttagtgttttagagtattaaaaaatttagaagcacttttcattagactctatatatgacatatctataat  25555300     --------->LBD16                                            <---------ZAT6     ------>ZmHOX2a(1)                          <---------TOE2(3) ----->YAB1                                     <---------------AtSPL3 ----->AHL20(2)                      <---------CCA1(2)        <---------ANAC46                    --- -->YAB1                      <---------CCA1(2) <---------------AtSPL8          ---------->DOF2<----- --YAB1          <-----------GT1   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      ----------->GT1 <--------   aatattcctgaatttgaatttagcatctacttatatcgcataactcatttatggtactgaaatttagtggaaaacagctagtaaaagagaagtattggtg  25555400                                           <---------------AGL15                                           --------------->AGL15                                     --------->TOE2(3)                                     <---------ANAC55(2)                                        -----                                     --------->TOE1(3)                                          -----                                 <---------ARR14(2)         <---------CCA1(2)                   <----     ---------->DOF2             --------->ARR14(2)--------->STY1(2)<----------DOF2           ------- -------->GT1         <------ZmHOX2a(1)    ========================================================== ----ANAC46        <-----------RAV1(2)------>ZmHOX2a(1)   <---------CCA1(2)                 --------- -AtMYB61  ---------->CDC5      <------ZmHOX2a(1)  <---------At4g35610                  -------------   tgataaataaagctcagaggctcaggataagtcaggattccttaactcattttagctagcctatctctctctttctctctctctgtctctccctatatat  25555500        --------->AHL20(2) ----------->GT1 ---->AHL20(2)                                                                                    --- ------>TBP                                                                                     ----- -----AHL20(2)               <---------TOE2(3)                 --------->ARR14(2)              ------ ---->TBP            ----------->GT1  ---------->DOF2          <---------ARR14(2)           --------- ===MADS_MADS   <---------ZAT6 <------ZmHOX2a(1)    <---------ATHB51       --------->ALFIN1--------->ARR11(3) -->TBP <---------AHL20(2)--------->ICU4      --------->YAB1   --------->GLK1(2)       ---------->DOF2 -->AGL15<---------AHL20(2)  <---------ANAC55(2)    --------->ICU4----------->GT1    *TSS  <---------ARR11(3)   aaatcgataaataaatgagtgtgaggtaattaaggaactagaaaggaataagaaattatggagagaatatgtgaaatgtggagagaaatgaaagatataa  25555600                                                                                             <-------          <---------MYB46(3)                                                                 --------       <---------MYB46(3)                           --------->ANAC58                      <---------ANAC58      --------->ALFIN1               --------->YAB1 --------->ANAC58                      <---------ANAC58      <---------AtMYB61       ----------->GT1    --------->STY1(2)                        <---------ANAC46   <---------AtMYB61    --------->ANAC46         <---------STY1(2)              <---------ZAT18 ---->GAMYB             --------->ANAC58        --------->ANAC58                --------->ZAT14 ---->RAP2.6(3)         --------->ANAC58        --------->ANAC46                --------->ZAT18 --->MYB52(1)          <---------LBD16          --------->ANAC58                <---------ZAT14 >CCA1(2)<---------AtMYB61   <------NtERF2  <-----------GT1             ------->TEIL <---------O2<---   cggcaatggtggtggttcaaatagctacggcagggttaaacatatttttcaagctagcaatggaagatggtatgaacccaagtgtactcgtggcctatcg  25555700                     <---------ICU4                     --------->ATHB12                    <---------YAB1                    --------->ICU4                                          <---------YAB1          <                  --------->YAB1                                      <---------TOE2(3)            --              <---------DAG2                                          <---------YAB1           ------ --ARR14(2)--------->REM1(1)--------->ARR14(2)                 --------->ANAC46           --------->YAB1 ->ARR14(2)<---------ALFIN1------>ZmHOX2a(1)  <---------TOE2(3)--------->ANAC55(2)     <----------DOF2 ------CCA1(2)<----------DOF2       --------->REM1(1)     <----------DOF2   <---------ANAC46   <-----   tctcttgtttgctacacttttcatgattcctatatgcttcatctttcaaaggttgtttttctttcacataatatggttgtgtttgtatgctttgatatta  25555800                                                                                            ---------                                                                                      <---------ANAC55(2)                                                                                      --------->ANAC55(1)                                                                                      --------->ANAC58                                                                                      --------->ANAC58         ----------->HVH21                                                            --------->ANAC55(2)       --------->ANAC55(2)                                                           <-------TEIL -----------GT1                                                                      --------->SPL7 ------->AHL20(2)   <------ZmHOX2a(1)                                               <--------P --->AHL20(2)==============HOX2a_HOX2a                                             <---------MYB52(1) ----AHL20(2)------>ZmHOX2a(2)            --------->AtLEC2   --------->YAB1    <---------LBD16   attaacttcatgtgatcgattaggaagaagaggccagagtttacatgcaggctgatgttactagcattactctcagggttactcgggtacgtaatagtca  25555900                                    <---------ICU4                            <----------ID1                            ----------->GT1                          --------->MYB52(1)           <---------GLK1(1) ----------->GT1                       --------->ANAC46              <---------AtLEC2   <---------TOE2(3)  <---------                     --------->ANAC58        <---------MYB52(1)         <---------TOE1(3)  <---------DAG2                     --------->ANAC58     ---------->ID1              ------>ZmHOX2a(1) <-----------GT1 >YAB1               --------->ANAC46    <-----------GT1    ------>ZmHOX2a(1)   <---------AHL20(2)<--   cacacacacacacacacacacacacacaaaacgaaaaatcatttttcgtttttttggatgtcctcttgtgtcctaaggttatatatatgttaactttttt  25556000                                        ----------->GT1                                  --------->ANAC46                                  --------->ANAC58                                  --------->ANAC58                            --------->YAB1                                  <---------HSFB2a(2)                            --------->AHL20(2)                              --------->HSFB2a(2)  --------->AHL20(2)       <---------YAB1                  <-------TEIL<---------ZAT6  <---------AHL20(2)    <---------AHL20(2)     --------->YAB1        <---------ANAC46 -DOF2                 --------->AHL20(2)    --------->AHL20(2)      <---------ANAC58              <- -------YAB1     <-----------GT1--------->CCA1(2)  --------->GLK1(2) <---------ANAC58             ---   gtgataaatttctcaaaataaaccattttataatatacgaaattgaaaaaaataatctatatacatggtttgagtgttacagaagtttaatgcaagacta  25556100  Previous    Next  AGI:  At1g68170.1    Description:  nodulin MtN21 family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G25270.1); similar to Protein of unknown function DUF6, transmembrane [Medicago truncatula] (GB:ABD28596.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 25555585    to: 25557921    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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