Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <------MYB83       <---------MYB46(3)       <------MYB46(1)      <---------MYB46(3)      <---------AtMYB61      --------->MYB55(2)      --------->MYB111(2)     <--------P     <---------MYB52(1)     <---------MYB55(1)                                              <---------MYB52(2)    <-------GAMYB--------->At4g35610                         <---------ARR14(2)    <---------MYB52(1)                                       --------->ARR14(2)   <------MYB46(1)                                           --------->GLK1(2)   <------MYB83  <---------At4g35610      --------->DAG2    ------>MYB46(1)             <------------   <---------MYB46(3)                <---------TOE2(3)      ------>MYB83                ============= ---------------->WRI1   <---------YAB1  ---------->DOF2  <---------MYB59              <---------ZAT2 -->HVH21     ---------->DOF2    --------->WOX13(1)    <-----------GT1                 <---------At4g35610   ttgttcggttggtcgatgaagcagaccattaatgtcattcaggtaaagctaaacattttaccaaatctgcaactaatccctctattcgaagctgtttttg  25496500                                                      --------->ZAT18                       <---------ANAC46   --------->At4g35610          --------->AHL20(2)              --------->ZAT14      --------->YAB1   <---------ANAC58   <---------At4g35610      <---------AHL20(2)               --------->At4g35610      --------->AHL20(2)<---------SPL7<-----------RAV1(1)                       --------->At4g35610  --------------->AGL15<---------ANAC58<---------At4g35610                   <---------At4g35610  <---------YAB1      <-----------------------TaNAC69(2)                     --------->At4g35610 -----AGL3<---------AHL20(2) <---------At4g35610      --------->ZAT14       ----------->RAV1(1)    <- =================MADS_MADS  --------->At4g35610      <---------ZAT14     --------->At4g35610--------   gtttctaattatataattcgttgtggcgtacagatgaaaactgctgcagacgtttgtgtactgtatgatatagagaagcagcagaagccttgatcatctt  25496600          --------->TOE2(3)          --------->TOE1(3)                       <---------At5g28300         ----------->RAV1(2)            ---------->ID1                    <---------AHL20(2)   ---------->ID1                     <---------MYB46(3)  <---------REM1(1) ---------DOF2              <----------DOF2  <----------DOF2    <---------AHL20(2)                <-- ->At4g35610       <----------DOF2   --------------->AtSPL8  ----------->GT1<---------TOE2(3) -------   cctttgtctcaacctgaaactcttttttttctttcattgtttgttctcttttcactgtggatgtagataattgtttttaatgaaatgaagaaatattgat  25496700                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                -----                             --------->ATHB12                                                   -----                            <---------YAB1                                                      <----                          <---------ICU4                                                        -----                          --------->YAB1                                                        <<<<<                        --------->GLK1(2)                                                      <-----  <----------DOF2      --------->YAB1                                  --------->ZAT14        <------ <---------DAG2     --------->YAB1 <---------------AGL15               <---------ZAT14  --------->CCA1(2) ---------GT1   ----------->GT1    --------------->AGL15         <---------ANAC58      <---------ARR14(2) -->ATHB12--------->ICU4--------->ARR11(3)                       <---------ANAC58      --------->ARR14(2)   ttgccttttgacataattttgttaataatcttgattacaaattttagtcagtgtttgatgcatagttgcatactgcagagttgagtttggatatggccac  25496800      <---------ARR11(3)      --------->ARR11(3) --------->ICU4 --------->At4g35610 ------>TGA2(2) --------TGA1 --------HVH21 ---->bZIP60(2) ---->ANAC46 -----bZIP60(1) -----TGA1a ---->TGA1a ---->ANAC58 ---->bZIP60(1)                                                                           --------->ANAC46 ---->ANAC58                                                             --------->YAB1 --------->AtMYB61 -----O2                                                       <-----------HVH21        <---------ALFIN1 ---->O2                 --------->DAG2                     <----------DOF2            --------->MYB46(3) <<<<<AtbZIP1        <---------ANAC55(2)                 --------->ARR14(2)           ------->TEIL ------bZIP910(1)    --------->ANAC58                    <---------ARR14(2)  ----------->RAV1(1) ---- ---ALFIN1           --------->ANAC58          --------->MYB52(1)<-----------GT1 *TSS<-----------GT1<   gtcagcattatctcgttaccaaaacgtaaggtccaaactcagataatacaaacgaagcagttctttgtcactctatcatcaacatatgaaccacaccaaa  25496900                                            ------>ZmHOX2a(2)                               --------->DEAR3(2)                             --------->ARR14(2)                        --------->ANAC58  --------->ARR11(3)                        --------->ANAC58  <---------ARR14(2)                    <---------ARR11(3)    --------->ARR14(2)                    --------->ARR11(3)    <---------ARR11(3)                   --------->YAB1     <---------MYB52(1)                   -------->HAHB4    <-------GAMYB                   <---------ICU4   <---------MYB46(3)                  <---------YAB1  ------>MYB46(1)                  --------->ICU4  ------>MYB83                          --------->TOE2(3)           -               XXXXXXXXXXXXXXXXXXXX>MIR823<---------AGP1              <---------ARR11(3)            <         ----------->GT1--------->AtLEC2 <---------CCA1(2)     ----------->RAV1(1)  <---------At4g35610 ------>DOF2<---------TOE2(2)<---------ARR14(2)  <----------DOF2      --------->ARR11(3)            - ----------ID1--------->ARR11(3)--------->DEAR3(1)          --------->ANAC46        --------->At4g35610   aaagaacaaaatcgtagataatgatcatgcaaaaccgaccgttggatcttactttcgatttcaaaccacataaatcttagtgactgagctaaaaaactga  25497000               --------->ARR11(3)               <---------ARR11(3)               --------->ARR14(3)             --------->ANAC58             --------->ANAC58                   <---------ARR11(3)        --------->DAG2                          --------->ARR11(3)      ---------->DOF2           <---------GLK1(2)                                                   < -------->AHL20(1)              --------->ARR14(2)                                       <---------MYB52(1) ---------AHL20(2)              <---------ARR14(2)                <----------DOF2   --------->ARR14(2) -------->AHL20(2)   ------>ZmHOX2a(1)  ----------->RAV1(1) <----------DOF2         <---------ARR14(2)   aattttttaaaaggcaagacctcctctgtttccatattctcaccacagaagaactcttgaggctttctcttttctctaccatggcgaaaccggtgtccat  25497100                                                                                                   --                                                   --------->HSFB2a(2)                            <--                                                  <---------LBD16                                 <--            ------>ZmHOX2a(1)                    <---------ANAC46  --------->WOX13(1)          <-----          --------->YAB1           --------->At4g35610 <---------GLK1(1)                      <------  ----------->GT1             <---------MYB46(3)------>NtERF2    <------ZmHOX2a(2)           <------- ---------ANAC46    --------->GLK1(1)    --------->MYB52(1)  <---------TOE1(2)      <---------TOE2(3)   tgaagtgtataatcctaatgggaaatacagagttgttagcacaaaaccgatgcctggaactcgctggatcaatctcttggtagaccaaggttgtcgcgtt  25497200    --------->ICU4 --------->GT1                                                                                   <--- -------TOE1(3)                                                                               ------- -------TOE2(3)                                                                              -------- -----CDC5                          <---------YAB1                                           <------- ----DOF2                         <-----------GT1                --------->GLK1(2)        <---------WOX13(1) --ANAC46     <----------DOF2--------->YAB1    <-------TEIL ---------->DOF2            <---------YAB1   gaggtaattctttcttctttctaagcatcaagaatattacaattcttgattcattcacacttaaaagtttctgtttttgtttttgaattttgatagatat  25497300                                              ------>ZmHOX2a(2)                                          ----------->HVH21                                         ------>ZmHOX2a(2)                     --------->MYB52(1)                                        <---------At4g35610                 --------->ANAC55(2)                                       <---------AGP1                       <---------ANAC55(2)                                   --------------------->WRI1               <---------At4g35610                                  --------->ATHB12                         --------->MYB59                                 <---------YAB1                           <-----------RAV1(2)                               <---------GLK1(1)                         <---------MYB52(1) --------HVH21                --------->ARR11(3)                        <-----------HVH21 -->CCA1(2)                   <---------ARR11(3)                     <---------At4g35610 ->ARR11(3)              xxxxxxxxxxxxxxxxxxx>smallRNA(i2)            --------->At4g35610 --ARR11(3)   --------->GLK1(2)--------->GLK1(1) <----------ARF1   <---------WRKY38(1)           ----   gtcatttgaagaagacaatcttgtctgtagaagatatcattgatctgatcggagacaagtgtgatggagtcatcggtcaggtaatggaatgaaacagagc  25497400  Previous    Next  AGI:  At1g68000.1    Description:  ATPIS1 (Arabidopsis thaliana phosphatidylinositol synthase 1); CDP-diacylglycerol-inositol 3-phosphatidyltransferase. Identical to CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1 (PIS1) [Arabidopsis Thaliana] (GB:Q8LBA6;GB:O81846); similar to PIS2 (PROBABLE CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 2), phosphotransferase, for other substituted phosphate groups [Arabidopsis thaliana] (TAIR:AT4G38570.1); similar to phosphatidylinositol synthase [Brassica napus] (GB:AAM77369.1); contains InterPro domain CDP-alcohol phosphatidyltransferase; (InterPro:IPR000462); contains InterPro domain CDP-diacylglycerol-inositol 3-phospha Range:  from: 25494677    to: 25496716    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g68010.1    Description:  HPR (HYDROXYPYRUVATE REDUCTASE); glycerate dehydrogenase/ poly(U) binding. similar to PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE), phosphoglycerate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G17745.1); similar to EDA9 (embryo sac development arrest 9), NAD binding / amino acid binding / binding / catalytic/ cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor / phosphoglycerate dehydrogenase [Arabidopsis thaliana] (TAIR:AT4G34200.1); similar to hydroxypyruvate reductase [Bruguiera gymnorrhiza] (GB:BAB44155.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47393.1); similar to unknown [Pop Range:  from: 25496881    to: 25499651    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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