Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  <--                                                                                                  ---                                                                                         ---------->DOF2         <---------YAB1                             <-----------GT1         --------->GLK1(2)     <--  --------->YAB1                           --------->ARR11(3)      <---------ICU4       <---------WRKY38(1) -----CCA1(2) <-----------HVH21        ---------->DOF2           ----------->RAV1(1)    <---------WRKY12   atcttcataatatgactgtcaaagtttgtaatcagatagaccaaagaaattgtttatctacataatccaacattgcataatctaatagagtcaaaggaag  25420200            ---------->DOF2        <---------TOE2(3)     <---------ATHB12                    <---------ZAT14      --------->ANAC58          <-----------RAV1(1) ------>ZAT18                            --------->ZAT14      --------->ANAC46     --------->GLK1(2) -------ZAT18                   --------->YAB1                --------->ANAC58    <---------ARR14(2) ------>ZAT14             --------->ANAC58                  ---------->DOF2       <---------GLK1(2) -------ZAT14             --------->ANAC58        <---------ZAT14                 --------->ARR14(2)   tgctctaatcaaggtaaagcttgaagctaggcaataagaacattgcagagagtgaagaacacaaaagccactaaacaaaatccagattctatgtcgctct  25420300                                                                           --------->CCA1(2)                                                                          <---------ARR14(2)                                                              ==================HOX2a_HOX2a                                    <---------ICU4            <------ZmHOX2a(2)                                   --------->ICU4           <------ZmHOX2a(1)     --------->AHL20(2)                             ---------->DOF2      <---------HSFB2a(2)     --------->ARR14(2)                        ------->TEIL--------->ATHB12    --------->ICU4 <---------TOE2(3)      <------                     <---------MYB52(2)  --------->TOE2(3)--------->MYB59<------ZmHOX2a(1)<---------GLK1(2)   accatcaaattagcatatgagaaacgaaccaaaaagaatgatttcttaaaatcgagaaattaggatcaattctgaggatacaaattatacaaaattctcg  25420400                 --------->WOX13(1)             <---------O2             --------->O2             --------->bZIP60(1)          ----------->HVH21       <---------ARR14(2)       --------->ARR14(2)                                      >>>>>>>>>>MYB80              <--------      <------ZmHOX2a(1)                              --------->ANAC58                     <---------At4g35610    <---------TOE1(2)                                --------->ANAC58                     --------->ZAT2    <---------TOE2(2)          ----------->HVH21     --------->ANAC46                     --------->At4g35610  --------->TOE2(2)      --------->ARR14(2)          --------->AtLEC2                     <---------ZAT2  --------->TOE1(2)      <---------ARR14(2)    <---------GLK1(1)                 ---------->DOF2 ---HSFB2a(2)<---------bZIP60(1)               --------->GLK1(1) --------->AtMYB61    <-----------HVH21   ataacctaggatttgacgtcaatcccaaatccagtgacacattaactcgaaatccatgcaattcaaaccaaaaccaagactaagaaagtgtcagctttca  25420500                                                                                               ------                                                                                              -------                                                                                             --------                                                                                          -----------               <------NtERF2                                                           <---------WOX13(1)        <---------STY1(1)                                                             <---------ANAC58     --------->ANAC46                 --------->HSFB2a(1)                  <----------DOF2-----------     --------->ZAT6                   <---------HSFB2a(1)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <-----------GT1    <------ZmHOX2a(1)                       <------ZmHOX2a(2)  <---------AtLEC2   - --DOF2 --------->STY1(1)      --------->GLK1(2) --------->ICU4          ------->TEIL <---------ANAC58   gtatttcacactagggcagagagaggaagagagaatcgaaaccttctcgtcttgatgaagagcgatccagacatgaactttgtccatggattgccaaaag  25420600      ------>NtERF2     --------->RAP2.6(2)   --------->At4g35610   <---------At4g35610                                               <---------ARR11(3) --->DAG2                                         <---------REM1(1)  --------->ARR11(3) --->DOF2                                   <-----------RAV1(1) --------->At4g35610 -->DOF2                                <---------YAB1          <---------At4g35610                <- ------>AG                            --------->REM1(1)      <---------MYB52(1)        <------NtERF2 ------>AGL1<-----------HVH21      --------->TOE2(3)        <-----------TGA1<<<<<<<<<TBF1          -- --------->DOF2     ---------->DOF2--------->TOE1(3)        <-----------HVH21        <---------DEAR3(1)   gcgaaagcggccaatgtcatcccaaagtaagtcaaaaccttcaccattgttgttgtagttttcgtcagctaaatcttcttcttctcgtcgtcgtttctca  25420700                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                          ---------->DOF2                                                                        --------->LBD16                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                               <---------ARR11(3)                                                               --------->ARR11(3)                                                               --------->ARR14(2)                                                               --------->GLK1(2)                         --------->TOE1(2)                     <---------AGP1 --------->ARR11(3)                         <---------LBD16                     <---------HSFB2a(1)                        ------>ZmHOX2a(2)                    --------->HSFB2a(1)                        ===========================HOX2a_HOX2a <---------ARR14(2)<---------ALFIN1                       ============================HOX2a_HOX2a<------ZmHOX2a(1)  <-----------GT1                       <------ZmHOX2a(2)                     --------->HSFC1(2) <-------TEIL                      <---------ARR14(2)            <------------CBF  <---------LBD16             =================HOX2a_HOX2a   ============================HOX2a_HOX2a <---------DAG2             ==================HOX2a_HOX2a  ===========================HOX2a_HOX2a --------->ANAC46             <------ZmHOX2a(1)  ---------->DOF2    --------->ATHB12   --------->ZAT18        -------- --------ZAT14        --------->ARR14(2)    <------ZmHOX2a(1)<---------HSFC1(2)--------->CCA1(2) <--- ------->ZAT14  --------->ATERF1(1)   <---------LBD16  <---------LBD16<---------ZAT18       <--------   gaacagagagagagaggagtcgcagatcgcgcgatgaagccctggaggatgtgttattggggaaggatctagtgcggaaagatacaccttactaccgtag  25420800                                 <---------WRKY18(1)                                --------->WRKY38(1)                                --------->WRKY12                                --------->WRKY45                          ---------->ID1                         <-----------HVH21                       <-------MYC4                       <-------MYC3                       ------->MYC3                       <-------MYC2                       ------->MYC2                      --------->O2                      <<<<<<<<<<ABI5                      <<<<<<<<<<HY5                      <<<<<<<<<<AtMYC2                      <--------ABF1                      --------->ANAC55(2)                      --------->bZIP60(2)                      <---------TGA1a                      --------->TGA1a        <---------ARR11(3)                      ===================bZIP_DOF     ------>ZmHOX2a(1)       <---------ANAC58------->PIF5         --------->CCA1(1)    --------->LBD16       <---------ANAC46<-------PIF5         <---------GLK1(1)   <---------ANAC46       <---------ANAC58------->MYC4         --------->RVE1(1)   <---------HSFB2a(2)  <------------CBF    <---------O2          --------->GLK1(1)   --------->HSFB2a(2) ->LBD16              <---------ANAC55(2)  <---------ARR11(3)--------->ARR14(2) ---------CBF----------->TBP  <----------DOF2--------->ARR11(3)<---------LBD16 -ANAC46 ----------->GT1--------->ALFIN1   --------->ARR11(3)<---------ARR14(2)   attggattgtcttgtataaatgccacgtgtcgctttgaccatatagatatctcttcctctacggttccggataaatgaaatttcatattttggagtcgga  25420900                                                    --------->AHL20(2)                                              ----------->GT1                                      ------->TEIL  <---------AHL20(2)                                      <-----------ARR10                                      --------->GLK1(2)                  <-----------GT1                            <-----------TBP <---------WOX13(1)      --------->AHL20(1)     <---------MYB52(1)           <----------DOF2<----------DOF2  <------------CBF         --------->AHL20(2)   <---------MYB46(3)           <---------DAG2 <---------DAG2 <---------YAB1             <---------AHL20(2) <---------At4g35610         ------->TEIL  <-----------GT1<---------ARR11(1)   ----------->GT1    <---------MYB52(1)<---- <---------ZAT6     <-----------GT1  <---------ARR14(1)   --------------->AtSPL8      <---------AGP1   ttagtcttacgaactttttttttttctactttttatatcgaatctaattggtaattaaaaactgtacaaattttttaactgttaactagagctgttagct  25421000                                                      <---------ARR14(2)                                                     <------ZmHOX2a(1)      --------->ARR14(2)                                          <---------ARR11(3)                <---------ARR14(2)    <--                                          --------->ARR11(3)               --------->KAN4(1)     <---                                          <---------AHL20(1)               --------->GLK1(1)    <----                                          --------->AHL20(1)              <---------KAN4(2)<---------ICU4                                     <---------AHL20(2)           --------->ANAC58  --------->ARR11(3)                ----------->GT1      --------->AHL20(2)           --------->ANAC58  <---------ARR11(3)   <------ZmHOX2a(1)  ---------->DOF2<---------AHL20(1)        <---------ATHB12     --------->GLK1(2) ------DOF2  --------->MYB52(1)      --------->AHL20(1) ----------->GT1   ---------->TaMYB80    <----   ttataggaatagagcaaactgttataaagaattatacaataaaatatatcacagaggattgtgaaatcaagcctggaatatccaaaaatctaacaattgc  25421100  Previous    Next  AGI:  At1g67785.1    Description:  similar to Os01g0908400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045143.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42476.1) Range:  from: 25419732    to: 25420647    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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