Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------AHL20(1)                                                                        <---------AHL20(2)                                                                        --------->AHL20(2)                                                                       --------->AHL20(2)                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                             <---------ARR14(2)                                                             --------->AGP1                     --------->CCA1(2)                       --------->ARR14(3)                    <---------ARR11(3)                       <---------ARR14(3)       <---------ANAC58              --------->YAB1          --------->ARR14(2)       <---------ANAC46           <------------CBF           <-----------ARR10       <---------ANAC58<---------YAB1--------->ATHB12        --------->ARR11(3) -HSFC1(2)          --------->ARR11(3)                       <---------ARR11(3) >HSFB2a(1)         <---------AHL20(1)                      --------->GLK1(1)     <---------WOX13(1) >HSFC1(2)          --------->AHL20(1)                      <---------GLK1(1)    <------------CBF -HSFB2a(1)---------->ARF1 <---------ZAT6                  ----------->ARR10   <---------YAB1    <---   taagaaatggcttgtcttccaagatattagtgttgacattgattacagagagagagggagagagatcttcgcattaaatttgtaattgctgaatatatga  25275400                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                                --------->CCA1(2)                                --------->ARR14(1)                               --------->AGP1                               <---------ARR14(2)                               --------->ARR14(2)                           <---------MYB52(1)                                  <---------GLK1(1)                    <---------ARR11(3)                                  --------->GLK1(2)      ------                    --------->AHL20(1)                                  --------->ARR14(2)     ------                    <---------AHL20(1)               <-------GAMYB      <---------ARR14(2)     ------          <---------At4g35610----------->ARR10<---------MYB52(1)        --------->ARR11(3) <--------- ------YAB1<----------CDC5--------->TOE2(3)------>ZmHOX2a(2)      ----------->GT1    <---------MYB52(1)   tgtttactcttgcgctgggcaaaatattcgttagatccgatttgatccgttattcggttgaattcgattcgaaaaatctggatgtccgtcgttttacaag  25275500                               <----------DOF2                              <---------ANAC58                     --------->ARR11(3)                     --------->ARR14(2)                     <---------ARR11(3)                    --------->RVE1(1)                                                               <                    --------->CCA1(1)                                                               <  <---------ATHB12--------->AHL20(2)                                                               <- --->ANAC46       --------->YAB1                    <---------TOE2(3)              --------->DAG2  <- --->ANAC58     --------->AHL20(1)                  <---------TOE1(3)             --------->DAG2  <-- --->ANAC58     --------->AHL20(2)    <---------AHL20(2)                --------->YAB1         <----- --GT1         --------->YAB1 <---------ANAC58  <----------DOF2<---------ANAC46  ---------->DOF2-----   gcaaatcaaacactgaaaaataatatcttcttgctttgttttaaatgttgatttaagggaatgttttgtgtttatcaaaaaaaaaaaggggaatgttttg  25275600             <----------DOF2       <-----------RAV1(1)       --------->ALFIN1       <---------ZAT6     <---------ANAC58                                           --------->ARR14(2)     <---------ANAC46                                           <---------GLK1(2)     <---------ANAC58                                           <---------ARR14(2) ------MYB46(1)                                                 --------->ARR11(1) ------MYB83<---------ANAC46                                   <------ZmHOX2a(1) --------MYB46(3)                                       --------->TOE2(3) --------AtMYB61           ---------->DOF2         ---------->DOF2                                  - -------WOX13(1)   ---------->DOF2     --------->At4g35610 ---------->DOF2                        --- ----YAB1   <---------ANAC58      --------->YAB1  <---------WRKY45                              ----- ---->ATHB12<---------ANAC58   --------->YAB1     <---------WRKY38(1)                     <----------   attggtggagtgttgctttgagaaagaatgaaagaataataagcagagggagtcaaagcctcaaaggattcggaatagtttgacttaagtttttacacag  25275700             --------->MYB52(1)            --------->MYB52(1)                             --------->ZAT18 ------->GAMYB                                --------->DAG2                      --------->ANAC46 -------->MYB46(3)                           ---------->DOF2       <------------CBF   <------------CBF ------>MYB52(1)   ----------->HVH21<---------AHL20(2)     --------->ZAT14       <---------LBD16 ---->At5g28300   <--------P        --------->AHL20(1)     <---------ZAT14      --------->ANAC46 -GT1     --------->MYB46(3)        --------->AHL20(2)     <---------ZAT18  <----------DOF2         -   taacagaccagaacaaaccggttgacactcttaaaaaataaaataagaaaagtagtagtagtacacttgtattgctatctttacgcggtattgaatattc  25275800                                                            <------MYB83                                                       --------->ATHB12                                                     --------------->AGL15                                                     <---------------AGL15                                                    <-----------------AGL2                                                    <-----------------AGL1          <---------DAG2                            <---------YAB1          <-----------------AGL3          <----------DOF2                         <---------MYB52(1)   <---------ARR11(3)                 ---------->ID1          <---------At4g35610                 --------->ARR11(3)                 <-----------GT1 ----          --------->At4g35610            <-----------HVH21  <------MYB46(1)     <-----------GT1 <---- --------->DOF2  <-------TEIL--------->YAB1  *TSS<----------DOF2       ---------->DOF2         <-----   aacaaagaatttagctaaatacatttcgttatcatcaactcagtgtgaggtctttcttcatttggtttcaagagaaagtttttttcctttttctaattta  25275900                                                                                 ------>ZmHOX2a(2)                                                                                --------->CCA1(2)                                                                                <------ZmHOX2a(2)                                                                               <-----------ARR10                        >>>>>>>>>TBF1                                          <---------ARR14(2)             <---------MYB46(3)                                                <---------AGP1             <------MYB83  >>>>>>>>>TBF1                     ================================HOX2a_HOX2a            --------->MYB111(2)                       --------->LBD16          --------->ARR11(3)            <---------MYB46(3)                       --------->HSFB2a(2)       --------->AGP1            --------->ALFIN1                         <---------HSFB2a(2)       <---------ARR11(3)            --------->MYB111(1)                  <---------ANAC58              --------->ARR14(2)            --------->MYB55(2)                   <---------ANAC58   <---------At4g35610            <---------DEAR3(1)                  --------->At4g35610 <---------ZAT2            --------->MYB46(2)                  <---------At4g35610--------->GLK1(2)            <---------AtMYB61             --------->LBD16    ===========================HOX2a_HOX2a           <--------P   ------------------------>ANAC81---------->DOF2----------->GT1 ------>ZmHOX2a(2) ----->ANAC55(2)    <------ZmHOX2a(1) --------->ARR14(2)     <------ZmHOX2a(1)--------->RVE1(1) -----TOE2(3)<------MYB46(1)          <---------ARR14(2)     ==========================HOX2a_HOX2a ------GT1 <---------MYB55(1)     --------->TOE2(3) ----------------->AGL1 ---------->DOF2  ---------   cgttttgagatgggttggtggaggaagaagaagaagcctaaatccgagatagcttccgaaagaggagcgaagctgttaaaagatctgatcgaatgctgcg  25276000                                                   --------->MYB46(3)                                              --------->ANAC58                                              --------->ANAC58                                            ---------->DOF2                                          --------->LBD16                                         --------->ANAC58                                         --------->ANAC46                                         --------->ANAC58                                        <---------LBD16                                        ------>ZmHOX2a(2)                                       --------->CCA1(2)                                       --------->ARR14(1)                                       <------ZmHOX2a(2)                                      --------->ARR11(3)                                      --------->ARR14(2)                                      --------->AGP1--------->AtMYB61                                      <---------ARR14(2)        <---------ANAC58                                     <---------GLK1(1)------>MYB83 <-----------ARR10                                     --------->GLK1(1)------>MYB46(1)    --------->ARR14(2)       --------->At4g35610  ------>NtERF2 <---------ANAC46    <---------ARR14(2)       <---------At4g35610 --------->RAP2.6(2)   --------->GLK1(1)   <----------DOF2<---------ARR11(3)        <---------ANAC58              <------   <xxxxxxxxxxxxxxxxsmallRNA(i) <---------At4g35610<---------MYB52(2)                         ------- >TOE1(2)          <---------GLK1(2)----------->ARR10----------->RAV1(1)           --------->LBD16   atggcaaatccaatcccatcaaattcttttctgctgatgagatccgcaaagccaccaacaatttcggcgtgtctaatcttgtttccgaattatctcatga  25276100                                                    >>>>>>>GRF7                                                 <-----------HVH21                                              <---------ANAC55(2)                                              --------->ANAC55(2)                                   -                       --------->ANAC58       <---------ANAC58                                     --                       --------->ANAC58       <---------ANAC58                                     --                   --------->ANAC58         <---------YAB1      <-----------GT1                   ---    --------------->AGL15                <---------YAB1---------->DOF2                          <----    <---------------AGL15              --------->bZIP60(1)  <----------DOF2             <-------TEIL- ---YAB1           --------->ANAC58    <---------bZIP60(1)  <---------DAG2             --------->CCA1(2) -->ICU4           --------->ANAC46 ----------->HVH21 <------ZmHOX2a(1)           ---------->DOF2----   ttttgactacaaatggtattcaggcaagaacgagaaccatgacatgatacttgtcaggaaagctttttcccagtccgtctactacaaagatacatttttc  25276200 ----->NtERF2 ------->ANAC46 --------->HVH21            <-----------HVH21           --------->ARR11(3) ------>LBD16          <---------MYB46(3)           <---------WOX13(1)                       -------- -----LBD16 <-------TEIL   ----------->GT1        --------->ATHB12                          <-------- ---------->RAV1(1) --------->YAB1         --------->LBD16     <---------ANAC58    --------->YAB1 ----->ANAC46  <---------YAB1              ------>ZmHOX2a(1)   <---------ANAC58   <---------ATHB12   cgcgacatagcagtttcatcaatggtgagtggtcacaaaaacttcctgaaattgattggatattgtcttgagtttgaagagccagtcatggtttatcatg  25276300  Previous    Next  AGI:  At1g67470.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G65250.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68783.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 25275845    to: 25277239    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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