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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                  --
                                                                                 --------->At4g35610
                                                                                 ----------->RAV1(2)
                                   --------->YAB1                         --------->ANAC58        --
                                  <---------ATHB12                        --------->ANAC46        <-
                                  <<<<<<<<<ARR2             <-----------GT1      <---------At4g35610
                                --------->WOX13(1)       ----------->GT1  --------->ANAC58        <-
                        ---------->DOF2            --------->MYB46(3) <---------ALFIN1            --
                    --------->TOE2(3)           --------->YAB1        --------->AtMYB61          <--
      ------------------------>ANAC81          <---------ATHB12      --------->ANAC46         <-----
----->AtLEC2       --------->REM1(1)         --------->WOX13(1)    <-----------GT1          --------
 
tgcttagagatggaacaaaactacatcaaaagagacaatcaaacgattcaatcaacaacgaagtaacaattcaccacacgaatcacctgaatcagagatc  24779200
                                                                         --------->At4g35610
                                   <---------ARR14(1)                    <---------At4g35610
----->TEIL                       <---------ANAC58                 ------->TEIL
------->GLK1(2)                  <---------ANAC58                 <---------ARR14(2)        --------
--------ARR11(1)             ---------->DOF2             <---------ARR11(3)                ---------
--------ARR14(2)         <---------ARR14(2)              <---------AHL20(1)          --------->ANAC58
------->ARR14(2)         --------->ARR14(2)              --------->ARR11(3)       --------->DEAR3(1)
-------ARR14(1)         ------>MYB46(1)       --------->YAB1      --------->ARR14(2) --------->ANAC58
-ZmHOX2a(2)             ------>MYB83        --------->GLK1(2)     --------->GLK1(2)  --------->ANAC46
->GLK1(1)             <---------MYB59  ---------->DOF2   --------->AHL20(1)    ------>ZmHOX2a(2)
 
gaatctagcaaaaccagagattagaccaaatccaaagcgtatcaaagaatcagactcaaatattttctgaatctgaagctgatcgcagacgaaatcggaa  24779300
            <---------TOE2(3)
            <---------YAB1
            <---------TOE1(3)
      ------>ZmHOX2a(2)
     <------ZmHOX2a(2)
    --------->ARR11(3)
    --------->ARR14(2)
    <---------ARR14(2)
    --------->AGP1
    <---------ARR11(3)
   <---------GLK1(1)                                                ------->GAMYB
   --------->GLK1(1)     ------->GAMYB   ---------->DOF2           --------->MYB46(3)            <--
  ----------->ARR10     --------->MYB46(3)                        -------->P  <----------DOF2    ---
--->GT1  <---------MYB52(1)<------ZmHOX2a(2)                     <-----------GT1              ------
-->GT1<-------TEIL <-----------GT1     <---------AHL20(2)      <---------MYB52(2)        -----------
 
aaaatgagatccgttatggttttaacaacgatcaagagagatttaaaagaagaagatgagattgagactaaccatctccatctttgtcgaagaggctaaa  24779400
                 ------>ZmHOX2a(2)
                <------ZmHOX2a(2)
               --------->AGP1          ------>NtERF2
               --------->ARR11(3)      --------->LBD16
               <---------ARR11(3)     --------->ANAC46
   ------>ZmHOX2a(1)                  --------->ANAC58
   ====================HOX2a_HOX2a    --------->ANAC58
   =====================HOX2a_HOX2a  ------>ZmHOX2a(2)
  --------->TOE1(3)            --------->At4g35610                       <---------ANAC58
  --------->TOE2(3)         <---------MYB52(1)                           <---------ANAC58
-------HSFC1(2)<---------ARR14(2)  --------->ARR14(2)                   ---------->ID1
------>HSFC1(2)--------->ARR14(2)  <---------ARR14(2)          <----------DOF2
---->DOF2     --------->GLK1(1)<---------ZAT2              <---------CCA1(2)                  <-----
>GT1          <---------GLK1(1)<---------At4g35610 <<<<<<<<<TBF1       <-----------GT1   --------->ICU4
 
agcttccttaaactcagagatctgttcatcagttagctgatccgccatagcttcttcttctcgtttctttggtttttcgtttcagagaagaaatgatttt  24779500
                             --------->ARR11(3)
                             <-----------ARR10
                             <---------ARR11(3)
                             --------->AHL20(1)                                                 ----
                            --------->RVE1(1)                           ----------->GT1         ----
                  --------->At4g35610    ----------->RAV1(1)           --------->DAG2           ----
                  <---------ZAT2        --------->At1g77200           ---------->DOF2           ----
                  --------->ZAT2        --------->DREB2C(2)      <---------TOE2(3)              <---
                 --------->GLK1(2)      ------->GAMYB           --------->YAB1         <---------AHL20(2)
               --------->LBD16         --------->DEAR3(2)     *TSS<----------ID1      --------->AHL20(2)
     --------->LBD16----------->GT1    --------->MYB46(3)--------->ANAC58       --------->ANAC58<---
     ------>ZmHOX2a(1)      --------->CCA1(1)            --------->ANAC58       --------->ANAC58----
   <---------LBD16<---------At4g35610  --------->SPL7    --------->ANAC46----------->GT1       <----
----AHL20(2)  --------->ANAC46 --------->TOE2(3)     --------->YAB1<------ZmHOX2a(1)  <---------AHL20(2)
 
tttttttcctgaagtctccgaagctgtgaaaatatcttagcgaccgacaaaaacaattatacgacaatgaggaaaaagttaaaacgaaattaaatgttta  24779600
             <--------ATHB1
             --------->ATHB51
             <---------AHL20(2)
             --------->AHL20(2)
          --------->YAB1
         --------->ICU4
         <---------YAB1
       <---------ICU4
       --------->YAB1
      --------->ICU4
      <---------YAB1
    --------->YAB1
  <---------ARR11(3)
  --------->ARR11(3)
----->ANAC46 <---------ICU4
----->ANAC58<---------YAB1                     <---------YAB1
----->ANAC58--------->ICU4<------MYB83  <---------ICU4                                     ---------
----->HSFB2a(2)           <---------ANAC46--------->ANAC55(2)                             <---------ARR14(2)
------ANAC55(2)           <------MYB46(1) <---------ANAC55(2)                     --------->ZAT18
------HSFB2a(2)  <-----------GT1       <---------ATHB12                           <---------ZAT18
----->ANAC55(2) --------->AHL20(2)<---------At4g35610                 <------ZmHOX2a(1)   --------->ARR14(2)
-----LBD16<---------ICU4 --------->MYB59--------->YAB1   --------->ALFIN1    ---------->DOF2<-------TEIL
 
cggaagataataataataatttactagttgggtttttagctaatcatgtgattagtggatgtgggacttgagaggaagcccaaagggcccttggatacac  24779700
                                                --------->ATHB12
                                                <---------ICU4                                  ----
                                               --------->ICU4                           <--------ATHB1
                                               <---------ATHB12                         --------->YAB1
                             <-----------GT1   <---------YAB1                  --------->ARR14(2)
                    <---------AHL20(2)   --------->DAG2           ----------->GT1      <---------ATHB12
               <---------AHL20(2)    <---------AHL20(2)           --------->YAB1       <---------ATHB51
<---------TOE1(3)   --------->AHL20(2)  ---------->DOF2         <---------WOX13(1) ------>ZmHOX2a(1)
<---------TOE2(3)--------->YAB1--------->ANAC55(2)   <-----------GT1<---------YAB1--------->TOE2(3)
>CCA1(2)       --------->AHL20(2)    --------->AHL20(2)      <---------YAB1    <---------ARR14(2)
 
attaaggcttaaaaatgttttaataaaacaatttacatatttaaaaagtaatgatttttcaattttgaatgataaataagacaatcctcaataatacaat  24779800
                                                                   <-----------GT1
                                                         <---------ICU4
                                                        <---------YAB1
                                                      --------->YAB1                   <---------ICU4
                                                     <------ZmHOX2a(2)                --------->AHL20(2)
                                         <---------AHL20(2)  --------->AHL20(2) --------->ANAC58
                                         --------->AHL20(2)  <---------AHL20(1) ----------->GT1
                                 <---------YAB1     --------->ARR11(3)        ---------->DOF2<------
                            <---------ICU4  <---------YAB1   <---------AHL20(2) --------->ANAC58
            --------->At4g35610 >>>>>>>>>>>>>>>>>LFY<---------ARR11(3)     --------->LBD16<---------AHL20(2)
----->YAB1  <---------At4g35610<-----------GT1     <---------At4g35610    --------->LBD16 <---------
 
agtacttaagttttaagctgtaagttttccaaaattaccattgttttattattcagatcatcattttatttgacatccctgaaaagcaaatatttacttt  24779900
                                                      <---------MYB59
                                                    <---------ARR11(3)
                                                    --------->ARR11(3)                        ------
                                                ---------->DOF2                               ------
                                             ----------->GT1                               ---------
               <---------ANAC46          ---------->DOF2------>MYB83             --------->ANAC55(2)
         <---------AHL20(2)             ------>ZmHOX2a(1)           ---------->DOF2        ---------
        <---------AHL20(2)             --------->TOE2(3)------>MYB46(1)          <---------ANAC58
        <---------AHL20(1)            ==============================================================
----DOF2--------->AHL20(1)            --------------->AGL15 <---------YAB1       <---------ANAC58 --
--GT1   --------->AHL20(2)            ----------------->AG --------->TOE2(3)     <---------ANAC55(2)
 
tgagtttaaaataaaattgtgtttacttaaaaacagttttatcctaaagagtaaagacctaatcttatagtaaaagttgacattacttactgtataataa  24780000
                                                                                    --------->AHL20(2)
                                                                                   <---------AHL20(2)
                                                                                 <---------YAB1
                                                                         ----------->GT1
                                                                      --------->GLK1(2)
  <------ZmHOX2a(1)          <------ZmHOX2a(1)                        --------->ARR11(3)   <--------
--->AHL20(2)                 <----------ID1                        <---------AHL20(2)      <--------
--->YAB1                  --------->CCA1(2)                        --------->AHL20(2)     <---------LBD16
>YAB1                ---------->DOF2  --------->MYB52(1)      <---------YAB1    <---------AHL20(2)
-->GT1              <---------------AGL15                <---------At4g35610  --------->ICU4
====================================MADS_MADS            --------->At4g35610  <---------YAB1   -----
-------->DOF2       --------------->AGL15              <-----------RAV1(2) <---------MYB52(1)-------
 
aaaaaggattgaactagtagtttctaaagataggaacaaaacaactgttcaattttcttcagatgaagattaaaatctgttattattttaaatctcgggg  24780100
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AGI:  At1g66410.1   
Description:  CAM4 (CALMODULIN 4); calcium ion binding. Identical to Calmodulin-1/4 (CAM4) [Arabidopsis Thaliana] (GB:P25854;GB:Q03510;GB:Q9FJ05); similar to CAM1 (CALMODULIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT5G37780.1); similar to Os05g0491100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055907.1); similar to Calmodulin (CaM) (GB:P17928); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:  from: 24777880    to: 24779563    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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