Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------ICU4                                                    --                                 --------->YAB1                                                    <-                              --------->YAB1                                                      <--                             --------->AHL20(2)                                 --------->YAB1  -----                         <---------YAB1                                --------->AtMYB61        -----                  --------->ANAC58  <---------ICU4                     ------->GAMYB            <----                  --------->ANAC58  --------->YAB1                     --------->YAB1         <------                 --------->WOX13(1)<---------YAB1                     --------->MYB46(3)  <---------DAG2                ---------->DOF2 <---------ATHB12                 --------->ANAC46         <----------DOF2   aattctaaatcgattctatcaagcactaccattaatcatcatcatcttcttaaactcttcaaaatcaacacaaccatcaccatcagaatcaactttatta  24774600                                                                                    <---------YAB1                                                                            ------>ZmHOX2a(1)                                                                            ==================HOX2a_HOX2a                                                                          <---------HSFB2a(1)                                                                          ------>ZmHOX2a(2)                                                                          --------->HSFB2a(1)                                                                          --------->HSFC1(2)                                                                          <---------HSFC1(2)    <----------DOF2                                                      <------ZmHOX2a(2)    ------>ZmHOX2a(1)                                                   --------->ARR11(3) ------->YAB1                                         <---------ZAT6    <---------ARR14(2) --------ICU4                                     ------->GAMYB         --------->ARR14(2) -------ATHB12                                 --------->MYB52(1)       <---------ARR11(3) ---->YAB1              <---------ALFIN1    --------->YAB1              --------->AGP1 ---->WOX13(1)          --------->ZAT6 --------->GLK1(2)               <---------GLK1(1)      ------- -------GT1  --------->YAB1           <---------GLK1(2)                --------->GLK1(1)     <------- ---YAB1   --------->GLK1(2)          <---------ARR11(3)              ----------->ARR10<------ZmHOX2a(2)   atcatcctttgacaatcttgaatcgaacacttctcaccaagattcttcataaccgagtgtaactcattagccgagatccttccattacgatccaaatcat  24774700                                                                         ------->GAMYB                                                                        <------------MYB.PH3(2)                                                                        <---------MYB52(2)                                                                      ----------->RAV1(1)     ---------->DOF2                                                 <----------ID1   --------->YAB1                                                  --------->ANAC58                 <  <---------ATHB12                  <-----------RAV1(1)            --------->ANAC58     --------->WOX13(1) -->YAB1          <---------CCA1(2)<---------YAB1      --------->ATHB12 --------->MYB46(3)<---------ATHB12 --ATHB12    <----------DOF2 --------->ZAT18 <----------DOF2     ---------->DOF2      <---------ATHB12   acaaatcaaaagcttctttcaaatctctaatcgcactattgttgctactttgatcactgatttgaaacaaagcaacaaactcatccaaatcaatgaaacc  24774800                                                                              --------------------->WRI1                                                                              <----------DOF2                                                                          <---------O2                                                                          --------->O2                                                                          --------->TGA1a                                <---------AtMYB61                         <---------ANAC55(2)                        <---------ICU4                                    ===============bZIP_DOF                        --------->ATHB12                                  --------->ANAC55(2)                  <----------DOF2                                     <-----------HVH21          <------ZmHOX2a(2)   <----------DOF2                        ------>ZmHOX2a(1)         <---------ARR11(3)  <---------ANAC58                   <---------At4g35610                 <         --------->ARR11(3)  <---------ANAC58                   <---------GLK1(1)                <---       --------->ICU4  --------->ICU4                           --------->GLK1(1)                ----   <---------RAP2.6(3) <---------YAB1                        ----------------------->TaNAC69(2)  <--- ---------At5g28300  --------->YAB1            XXXXXXXXXXXXXXXXXXXX>MIR395B/C/F    <---------At4g35610   attaccgtcaagatcaaactctttcatcattgctttggtttcttcttgtgaagcgtttggagagagagctcctatcacgtctttaagctcatcgatagag  24774900                                                                       --------->ANAC46                                                                      --------->HSFB2a(2)                                                                      <---------HSFC1(1)                                                                      --------->HSFC1(1)                                                                      <---------HSFB2a(2)         <---------MYB52(1)                                       --------->ARR14(2) <-----------GT1                                                  <---------ARR14(2) -----------GT1                       <---------ANAC58            <---------GLK1(2)       --------->AHL20(2) ------GLK1(2)                        <---------ANAC58     ------>ZmHOX2a(1)              <---------AHL20(2) ----->ARR11(3)                    <----------DOF2       ------>ZmHOX2a(2)  --------->HSFB2a(1) ------ARR11(3)         --------->ATHB12        <---------------------WRI1  <---------HSFB2a(1)   attttcccatcgttgtttttgtcgaatcgttggaatactttcttgatgtcttccattgatcctaagcagtttctcgaaacgttcttcgacatttttttag  24775000                                                          <---------AHL20(2)                                                          ----------->TBP                                                          --------->AHL20(2)                                                  <-------GAMYB                         <-----------GT1                                                 --------->MYB55(2)               <---------ANAC46                                                 <---------MYB46(3)               <---------ANAC58                       <------ZmHOX2a(1)         --------->MYB111(2)              <---------ANAC58          <---------ARR11(3)                     --------->MYB46(2)               <---------bZIP60(2)          --------->ARR14(3)                     --------->MYB52(2)              ----------->STF1          <---------ARR14(2)                     --------->MYB111(1)           ----------->HVH21          <---------GLK1(2)                   ------------>MYB.PH3(2)          ----------->TGA1          --------->ARR11(3)                 <---------ZAT6                  <---------O2          --          <---------ARR14(3)      *TSS   ---------->DOF2--------->CCA1(2)  <---------ZAT14 <---------LBD16   agagaaatagaagattttggaaataggagaaattgtgagaagagaaagtgttagttggatataaatagggtttttggtgaagtgacgttttaacgcggtt  24775100                  <---------ANAC46                  <---------ANAC55(2)                  <---------ANAC58       --------->HSFC1(2)                  <---------ANAC55(1)    --------->HSFB2a(1)                  --------->ANAC55(2)    <---------HSFB2a(1)                  <---------ANAC58       <---------HSFC1(2)             --------->ATHB12           <-----------ARR10                <----------DOF2          ---------->DOF2               ----------->ARR10         <---------YAB1                    <        ----------->HVH21      <---------ZAT14                    <---------AHL20(2)                -      <---------ANAC46        <---------ZAT6                <---------YAB1     <-----------GT1  <----      <---------ANAC55(2)  <------ZmHOX2a(1)          <---------YAB1     <---------DAG2     <-------- -------->DOF2<------------CBF--------->ALFIN1       --------->TOE2(3)<-----------GT1       ---------   ttaaagacgcgtgaaagattgcgtgagtaggagtgttgagagaagcttctcttaacattattctgatttttattactttataaactctcttgcaaatttt  24775200                                                  --------->ARR14(2)                                                  <---------ARR11(3)      <---------YAB1                              <---------ARR14(2)   <---------YAB1                                 --------->ARR11(3) --------->YAB1                       <---------AHL20(2)                                    <-------- ---------AHL20(2)                   <---------AHL20(2)                                   <---------AHL20(2) -------->AHL20(2)       <---------TOE2(3)       <------ZmHOX2a(1)                        <---------YAB1 -----YAB1     <---------O2          --------->AHL20(2)   --------->AHL20(1)        <---------WOX13(1) -ARR14(2)     <---------bZIP60(2)   <---------AHL20(1)   --------->ARR11(3)     ----------->HVH21  < >ARR14(2)  ----------->HVH21        --------->AHL20(1)   <---------AHL20(1) <---------CCA1(2)  <----   catttattattagtttgacgaggcatttatgtaaactaatttatttctataggatattgatatattgatatcaattgatatatctgatggatattatttt  24775300                                                                      --------->AHL20(2)           <-                                           --------->ALFIN1           --------->YAB1               --                                        <---------AtMYB61          --------->YAB1                  <-                                    <---------At4g35610        <---------YAB1                      --                                --------->LBD16               <---------AHL20(2)                   <-                               <---------ANAC55(2)      <---------ATHB12                           <-                               <---------HSFB2a(2)     --------->ANAC58                           ---    --------->MYB52(2)         --------->HSFB2a(2)    --------->WOX13(1)                        -----  <---------MYB52(1)          <---------LBD16   <---------ICU4--------->AHL20(2)               ------ -AHL20(2)                 <---------GLK1(1)    --------->ATHB12--------->YAB1                 <----- ---------MYB46(3)  <-----------GT1 --------->At4g35610--------->ANAC58--------->AHL20(2)  <---------AHL20(2) -----YAB1  <-----------GT1--------->GLK1(1)----------->GT1  --------->YAB1  <---------YAB1--------->AHL20(2)   gtttgttagtttttatacgatttaacaagaattccggaagcagaggtggataattgcaatcaattttaataataaaaatatgaaaatcaatttttaatta  24775400      --------------->AtSPL8      <---------------AtSPL8  <---------AHL20(2)  --------->AHL20(2) --------AHL20(1) ------->YAB1 --------AHL20(2) ------->AHL20(2) -------ATHB1 --------ICU4                                                 ----------->GT1                  <----- ------>ICU4                                              <---------AHL20(2)                --------- ---->YAB1       <---------AHL20(1)           --------->At4g35610                           <-------- --->AHL20(2)   --------->YAB1        --------->ZAT6     --------->YAB1 <-------TEIL       <---------ATHB12 ----AHL20(2)--------->YAB1          <---------YAB1      --------->AHL20(2)    <-----------GT1<------   ataattttttagtactcataatatttcaacagtttttttatcagtagcagttgagtcaataaaaatgtaaaatatacatattttctgtattcaataatca  24775500  Previous    Next  AGI:  At1g66400.1    Description:  calmodulin-related protein, putative. similar to TCH2 (TOUCH 2), calcium ion binding [Arabidopsis thaliana] (TAIR:AT5G37770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68471.1); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 24774238    to: 24775034    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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