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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                    --------->ANAC55(2)
                                                                                   <-------TEIL
                                                                          ----------->GT1
                                                                          <---------ANAC46
                                                                      --------->ARR11(3)           -
      <-----------GT1      <----------DOF2                            <---------ARR11(3)          <-
-----ANAC55(2)           ---------->ID1                            <---------AHL20(2)       --------
---->ANAC55(2)  <-----------GT1                 <-----------GT1    --------->AHL20(2)<---------MYB59
-->AHL20(2)     --------->ANAC46             <---------KAN4(2)    --------->AHL20(2)--------->ANAC46
 
ataacaaattcacccttataaacaacttgtcttttttttttttgtgcgaataaacaacttgtctaaaaattaaaatctcgtatatatacataacttacca  24634700
                                                                                     <---------DAG2
                                                                                     <----------DOF2
                                                                                    <---------ANAC58
                                                                                    <---------ANAC58
                                                                                 <---------WOX13(1)
                                                                          <---------ARR11(3)
       --------->ANAC58             <-----------GT1           --------->ANAC58 <---------ICU4
       --------->ANAC58           <---------AHL20(2)          --------->ANAC58 --------->ATHB12
      --------->DAG2<---------CCA1(1)                        --------->DAG2   --------->AHL20(2)
<-------TEIL<---------ARR14(2)   --------->AHL20(2)         ---------->DOF2<---------RVE1(1)
-------->CCA1(2)   --------->ARR11(3)          <----------DOF2----------->GT1 <---------AHL20(2)
--------ARR11(3)   <---------ARR11(3)     <-------TEIL   --------->YAB1   --------->ARR11(3)
>P   ---------->DOF2<---------RVE1(1) --------->ANAC46  <---------ATHB12<---------TOE2(3)      <----
 
agatacaaaaaagcaaatttgagatatttttggcaatttaaacgatacatcttttaccaatgaaaaagcaaaattgagatattaattgcttttctatttc  24634800
                                                                             <-----------GT1
                                                                         <---------AHL20(2)
                                                                         --------->AHL20(2)
                                                                         <---------ICU4
                                                                     <---------AHL20(2)
                                                                     --------->AHL20(2)       ------
         <---------ANAC46                           <---------ARR11(3)   --------->ATHB51 <---------MYB52(1)
     <---------MYB52(1)                   --------->ANAC55(2)      <----------DOF2        --------->DOF5.7(2)
   <---------ANAC58                       <---------ANAC55(2)     --------->TOE1(3)      --------->TOE2(3)
   <---------ANAC46                  --------->ZAT6 --------->ARR11(3)  --------->ICU4   --------->TOE1(3)
   <---------ANAC58                  --------->ANAC46             --------->TOE2(3)    <---------TOE2(3)
-------GT1                        ------->GAMYB     <---------AHL20(1)--------->YAB1  <-----------GT1
 
accatttcgtttgtgtgaagcatttgacaaaatccaactcacactacgtagtcaatatatccactacaacctttaattattttccaaataaacgttatct  24634900
                                                            --------->AHL20(1)
                                                       <---------AHL20(2)
                       --------->AHL20(2)              --------->AHL20(2)
                   --------->AHL20(1)                --------->YAB1                       <---------ANAC58
               <---------AHL20(2)                  --------->AHL20(2)                <------------CBF
              --------->AHL20(2)                  --------->YAB1                    --------->ATHB12
          --------->ICU4                         --------->AHL20(2)         <---------MYB59
     --------->YAB1<---------AHL20(1)          --------->YAB1 <---------ARR11(3)   <---------YAB1
    <---------YAB1 --------->AHL20(2)        --------->AHL20(2)             <---------MYB46(2)
   <---------TOE1(2)   <---------AHL20(2)   --------->YAB1  <---------AHL20(1)    <-----------HVH21
  ------>ZmHOX2a(1)<---------AHL20(2)      --------->AHL20(2)<---------CCA1(2)  <------------AtMYB77
 --------->TOE1(2)--------->AHL20(2)   --------->AHL20(2)   --------->ARR11(3)------>MYB46(1)
 --------->TOE2(2)<---------AHL20(2)   <---------AHL20(2)   <---------ARR11(3)------>MYB83<---------ANAC58
--->TOE2(3)   <---------AHL20(2)       --------->AHL20(1)  --------->AHL20(2) --------->MYB52(1)  <-
 
caatcctatgataaaaattaaataaattaaaaaactccaaaataaaataaaaataaaaataaatatatctaatctgttaccaaactgtcattggcttagt  24635000
              <---------ZAT18
              --------->ZAT18
              <---------ZAT14     <----------DOF2
              --------->ZAT14   <---------At4g35610
            <-------MYC2        --------->At4g35610
            ------->MYC3     <---------At4g35610                                        ---------->DOF2
            ------->MYC2   <---------ANAC58                            *TSS           ------>ZmHOX2a(1)
--------PCF2<-------MYC3   <---------ANAC58<-------TEIL       ------------>CBF       --------->TOE2(3)
 
gggacagacatcccatgtgcagtctccttggcttctgcttcatagtttcatcttcttccttctctctcaatggcccatcttcccatttcctaaaagcttc  24635100
                                                                             <---------HSFB2a(1)
                                                         --------->ANAC46    --------->HSFB2a(1)   <
                                             ------>ZmHOX2a(1)      ---------->DOF2         <-------
                   <------------------------ANAC81       --------->ANAC58   ------->TEIL   <--------
                  <----------DOF2  <<<<<<<<<TBF1         --------->ANAC58  <---------ARR14(2)   <---
 
aaactttcttcacatttctctctttatctctctgtttcttcttcaatcctctgtttcttcaagctatgaagaaaagaagaacctttcttctattttcatt  24635200
                                             ------>ZmHOX2a(2)
                                            <------ZmHOX2a(2)
                                            --------->GLK1(1)
                                            <---------GLK1(1)                                      <
                                           <---------ARR14(3)                                     <-
                                           --------->ARR14(2)                                    <--
                                           --------->ARR11(3)         ---------->DOF2            <--
                                           <---------ARR14(2)      --------->ANAC58      <---------ARR11(3)
        <<<<<<<<<TBF1                      <---------ARR11(3)      --------->ANAC58 --------->ANAC46
<----------DOF2                           <---------GLK1(1)    --------->ANAC58    ------>MYB83 <---
---------DAG2              <---------At4g35610                 --------->ANAC58    ------>MYB46(1)<-
-----------------ANAC81 ---------->DOF2   --------->GLK1(1)   --------->WOX13(1)  <---------ALFIN1<-
-YAB1<<<<<<<<<TBF1 <----------DOF2 <---------YAB1            --------->ZAT6      --------->MYB46(3)<
--------GT1  <---------CCA1(2) <---------GLK1(2)            <---------YAB1--------->TOE1(3) <-------
 
tacctttcttcttcttctatctctttctaaagctgattctgatggagatctctcagcgatgttatcactcaagaaaagcttaaacccacccagttctttc  24635300
                                                                   ----------------->AGL2
                                                                   ----------------->AG
                                                                   ----------------->AGL1
                                                                   <-----------------AGL1
    ----------->HVH21                                            <---------ARR14(2)
<------MYB83                                                     --------->ARR14(2)
<------MYB46(1)                                              <---------LBD16
---------AtMYB61                                         ----------->HVH21                         <
--------MYB55(1)                                        <-----------HVH21                      <----
-------MYB52(1)                                        --------->ALFIN1<---------ARR14(2)      -----
-----GAMYB                                            <-------MYC3 ------>ZmHOX2a(2)           <----
------MYB46(3)                                        ------->MYC3<------ZmHOX2a(2)        ---------
-------P  ----------->HVH21                           --------->TOE1(2)--------->ARR14(2)  <--------
--------MYB52(1)                             =============================HOX2a_HOX2a   <---------REM1(2)
---------MYB46(3)                            ============================HOX2a_HOX2a--------->ARR14(2)
---DOF2 ----------->RAV1(2)                  <------ZmHOX2a(1) --------->LBD16      <---------ARR14(2)
 
ggttggtctgaccctgacccatgtaaatggactcacatcgtttgtacaggaacaaaacgtgtgacccggatccaaatcgggcattcgggtcttcaaggta  24635400
             --------->ANAC55(1)
             --------->ANAC58
             <---------ANAC55(2)
             --------->ANAC46
        <-----------ARR10
      ------>ZmHOX2a(1)
    ----------->RAV1(2)--------->YAB1
----------DOF2<---------MYB59
-----ZAT18   --------->ANAC58
---->ZAT18------>ZmHOX2a(2)                 <----------DOF2                   <---------------AGL15
---TEIL <---------ARR11(3)                <---------At4g35610                 <----------DOF2
------>AtSPL8--------->ANAC55(2)---------->DOF2           <---------ARR11(3)  --------------->AGL15
-TOE2(3)--------->AGP1<---------YAB1      --------->At4g35610        ------>ZmHOX2a(1)        <-----
 
cactttctcctgatctacgtaacttatcagagcttgaaagacttgagcttcaatggaacaacatctctggtcctgttccttctttaagtggtttagcttc  24635500
                             <---------YAB1
                           <----------DOF2
                       --------->MYB46(3)                     <-----------GT1                     <-
               --------->ANAC55(2)                      <---------TOE1(3)                         <-
               <---------ANAC55(2)                      <---------TOE2(3)              --------->YAB1
--TEIL         ----------->GT1                     <----------DOF2        --------->GLK1(2)       --
 
attacaagtcttgatgttaagtaacaacaactttgattctatccctagtgatgtctttcaaggtttaacttcgttacaatctgtagaaattgataacaat  24635600
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AGI:  At1g66150.1   
Description:  TMK1 (TRANSMEMBRANE KINASE 1). Identical to Putative receptor protein kinase TMK1 precursor (TMK1) [Arabidopsis Thaliana] (GB:P43298); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G24650.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G01820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38725.1); similar to LRR receptor-like protein kinase [Nicotiana tabacum] (GB:AAF66615.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42398.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contai
Range:  from: 24635072    to: 24638412    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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