Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->YAB1                                                                  -------         <---------ATHB12                                                              ---------->DOF2    --------->YAB1                                                              --------->ANAC58 ---->ZmHOX2a(1)                                       ---------->DOF2          --------->AtLEC2 ------>TOE2(3)     ----------->GT1      ------>ZmHOX2a(1) <------ZmHOX2a(1)    --------->ANAC58    - ---GLK1(1)  <---------ATHB12--------->TOE2(3)     --------->AHL20(2)        <---------YAB1 --------- -->GLK1(1)--------->WOX13(1)--------->TOE1(3)     --------->YAB1          --------->YAB1---------->DOF2   cctcaatcgaaatcaatcaaaatggttaaaaccttaagaagtccttgtttcaataaaaaaaggattcaacttgaacatcatcatgcaaacaaagagcaga  24601800                                                                                                 <---                                                                                             --------                                                                   --------->TOE2(3)      -----------                                                                  -------->ATHB1          ------>MYB46(1)                                   --------->ANAC46               --------->ATHB12        ------>MYB83                                <---------ZAT14                   --------->YAB1        --------->MYB46(3)     --------->MYB52(1)         <---------REM1(2)                 <---------ICU4       --------->ANAC58 --------->DAG2                 --------->ZAT14         --------->DAG2                 --------->ANAC58 ---->GT1                     --------->ANAC46         ---------->DOF2            <---------HSFC1(1) --------->DOF2             --------->ZAT6          --------->YAB1<--------HAHB4  --------->HSFB2a(2) >At4g35610                 --------->ANAC46       <---------YAB1<---------ATHB12 <---------HSFB2a(2)   gaaaaagtaacgaattggtcatagtaatctacactacacacagagaagttttgatgataaagtttgaatcattaaccatgaattcgagaacccaacatta  24601900                                                                            --------->HSFB2a(2)                                                                            <---------HSFC1(1)                                                                            <---------HSFB2a(2)                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                      --------->ATHB51                  --------->GLK1(2) --------->CCA1(2)                      <---------ICU4            --------->MYB52(1)       --------->ARR14(2)                     --------->ICU4             ----------->RAV1(1)      <---------ARR14(2)                     <---------YAB1             -------->P --------->WOX13(1)                   --------->YAB1               ------>MYB46(1)          <---------ARR11(3) ------TOE2(3)   <---------ARR11(3)             ------>MYB83             --------->AGP1 ->TOE2(3)   --------->YAB1                    --------->ANAC46          <---------AGP1 >RAV1(1)   <---------ATHB12                  --------->MYB46(3)         --------->ARR11(3)     -----   agaaatcaaatcaaatcaaaatcataatttggagcaattctatagaaacccaccagagaatcaatcgaaaattaagatctagaagcgaatttaactgaga  24602000                                                                             --------->ANAC58     <--                                                                             --------->ANAC58    <---        <----------DOF2 --------->MYB52(1)   ---------->DOF2   <------ZmHOX2a(1)                <---- ----->DOF2--------->YAB1     <------ZmHOX2a(1)             --------->At4g35610             <--------   aaggaaaaccctttgataagaaaacataccgaggaaagtctgaatccaaaagggtttttcgcagaggaagagaaatcgcaagaaaattgaagcgttttcg  24602100                              <---------ANAC58                          <----------DOF2                      <---------MYB46(3)                       <---------ANAC58                   <--       <---------GLK1(1)      <---------ANAC58                 <---------ANAC46            <---------AHL20(2) -------TOE1(2)      <---------AtMYB61            --------->CCA1(2) <-----------GT1     <---------ARR11(3) ------MYB52(1)   <---------AtMYB61   ----------->GT1          <---------ANAC58     <---------MYB52(1) ---GAMYB         --------->ALFIN1   ----------->GT1         <---------ANAC46      --------->TOE2(3)< -ARR14(2)    <XXXXXXXXXXXXXXXXXXXXMIR161.1---------->DOF2<----------DOF2        *TSS   --------->ARR11(3)   ttggattagaaatctccgatgtggtggtttttgcttcagaggttaaaaagagatttagggcttttgtgtgtttccttttgtttttcgttagattttatgc  24602200                                   <---------SPL7                   <<<<<<<<<<WRKY26                           ----------->RAV1(1)                      <<<<<<<<<<WRKY43                         <------NtERF2                              ------------>CBF                       --------->TCP16(1)                           <<<<<<<<<<WRKY38                       <---------PCF2                             ----------->GT1                       --------->PCF5                             <------MYB83<---------MYB52(1)     ---------->DOF2 <---------ATERF1(1)  <------ZmHOX2a(2)       <------MYB46(1)                ---- --------DOF2       --------->ALFIN1  --------->DEAR3(2)         --------->MYB59                 ---- -----------TBP   --------->DEAR3(1)  --------->MYB46(3)---------->DOF2      <-------GAMYB    <------   ctttttataaagcctttccaccgtggccccaacatgtcgaaccgatcaaagtatagaccaaagttgtttggtcaatttcggttagactgatacggtcgaa  24602300                     <-----------GT1                     ------->TEIL                  <---------ANAC55(2)                              <---------ICU4              ----------->RAV1(1)                                  --------->YAB1            <------NtERF2                                       <-----------GT1          --------->TCP16(1)                                   <---------AHL20(2)          <---------PCF2                                   <---------MYB52(1)          --------->PCF5                                 <---------ANAC58       --------->ALFIN1 <----------DOF2                  <---------ANAC58   <---------At5g28300  <---------DAG2                   <---------ANAC46                     <------ <------ZmHOX2a(2)--------->ANAC55(1)           <---------AHL20(2) <--------HAHB4             ------- ----->MYB46(3)   --------->ANAC55(2)           --------->AHL20(2)<---------ATHB12           <------- ----->DEAR3(2)   ----------->GT1    --------->ZAT6   <-----------GT1                        -------- ---SPL7<---------ATERF1(1)        <-----------GT1 <---------AHL20(2)  <---------AHL20(2)    <-------   ccgatcaccgtggccccaacatgtaactttttccatcttacactctccatttttttattccgtttttaatcatttttttttggagtttttgcacaatgat  24602400                                                                <---------ZAT18                                                                --------->ZAT18                                                            ------->MYC3                                                            <-------MYC3                                                           <---------TGA1a                                                           --------->TGA1a                                                         --------->TGA1a     <---------At4g35610                          --------->ARR14(2)     --------->At4g35610 ==========================================bZIP_DOF --ATHB1                 <---------DAG2           <---------ARR14(2)<---------ATHB12 -->ATHB12               ============================================bZIP_DOF --ATHB12           <---------ANAC55(2) ===========================MYC_MYB ->ICU4             --------->ANAC55(2) =============================MYC_MYB --YAB1----------->HVH21 <----------DOF2<-------GAMYB    <---------TGA1a                --------->ANAC55(2)   ttgaatttgctgaccaagtattaagtactttttgcaaatgagggttgaagggtattctcacatgtgtgcaatcgattgtagaaaatacttatgtattcga  24602500                                                                                  --------->LBD16                                                                             --------->KAN4(2)                                                                          <---------GLK1(2)                                                                         <---------At4g35610                                      <---------TOE1(2)             --------->ANAC58          -------                   <----------DOF2    <---------TOE2(2)             --------->ANAC58          <------             ---------->DOF2   <-------TEIL                         --------->ANAC46          <------         <---------TOE2(3) <---------YAB1 ------->TEIL          --------->AtLEC2 --------->LBD16   gattgaagtttaagttaaaggctttgattttgattcatcgtatgtatcagacaactagagttgtccatccaagtcagattatcccgaatatttgtaagct  24602600                                                       <---------HSFB2a(2)                                                     <---------ATHB12                                                    --------->GLK1(2)                                                   --------->WOX13(1)                                               --------->ANAC58                                               --------->ANAC58   --------->ZAT6                          <------MYB83--------->HSFB2a(2) -->HSFC1(2)                               <---------MYB46(3)                     <---------ATHB12 ---HSFC1(2)          <-------TEIL         <------MYB46(1)<<<<<<<ZML2        --------->TOE2(3) ---At4g35610     --------->MYB59        <---------MYB52(1)              --------->MYB46(3)<------ZmHOX2a(2)   tcttgactctacaaattgtttaggtccattgaatattgaagccgttggtaagccaatctagaaccatatcaaacaacaacttcaatcgattagatcaatg  24602700  Previous    Next  AGI:  At1g66070.1    Description:  translation initiation factor-related. similar to translation initiation factor-related [Arabidopsis thaliana] (TAIR:AT5G37475.1); similar to unknown [Populus trichocarpa] (GB:ABK92969.1); contains InterPro domain Translation initiation factor eIF3 subunit (InterPro:IPR013906) Range:  from: 24599549    to: 24602181    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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