Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------ICU4          <---------GLK1(2) --------->YAB1   --------->At4g35610   --------->YAB1                  ----------->HVH21 -------->At4g35610   --------->YAB1                   <----------DOF2                             <- -----STY1(2)        <---------YAB1             <---------YAB1<---------ARR14(2)                   -- ---->STY1(2)   <---------ICU4                 <---------ARR11(3)                               ----- --->ANAC58    <---------YAB1       <<<<<<<<<TBF1--------->YAB1                         <-------TEIL --->ANAC58  --------->YAB1 <---------ICU4------>ZmHOX2a(1)   --------->ARR14(2)       --------->CCA1(2) --->ANAC46 <-------TEIL--------->ICU4   --------->TOE2(3) <---------TOE2(3)          <---------ARR11(3)   ctagcagcatcagattcatcattctcataatcatcttcttcttcctcaaaatcatagctttgacgattcacaacaagagcccaaacaagatacatagtag  24444300                          ------>MYB83                          ------>MYB46(1)                        --------->DEAR3(1)                       --------->ANAC58                       --------->ANAC55(1)                       --------->ANAC58                       --------->ANAC46                    -------->P                 <---------MYB55(2)                 <---------MYB52(2)                 --------->MYB46(3)                --------->ANAC58                --------->ANAC58                       <---------ARR11(3)              --------->MYB46(3)                  <---------TOE2(3)            <---------ALFIN1                 --------->ANAC58            --------->AtMYB61              ------>NtERF2          ----------->RAV1(1) ---------->DOF2--------->ANAC58     ---------->DOF2------>MYB83          --------->DEAR3(1)                                      ---  --------->At5g28300<---------ALFIN1     <---------DEAR3(1)                                    <---- <---------MYB46(3) ------>MYB46(1)     ------>NtERF2  --------->ARR11(3)                      <----- --------At4g35610--------->AtMYB61    --------->DEAR3(1)                                     ------- ------->At4g35610------->GAMYB      <---------ATERF1(1)             ------>ZmHOX2a(2)   <---------YAB1 ---->At4g35610 --------->ANAC46    ----------->HVH21 --------->RVE1(1)            <---------TOE2(3)   cagcggttaaagcaccacaaccaacaccgaacaaaagcgcgacgacgacgctaagaatatctctggttcgatctctaaacgaattgatgttatcagagat  24444400                                                                           <---------ARR14(2)                                                                           --------->ARR14(2)                                                                          <------ZmHOX2a(1)                                                                   --------->ALFIN1                                                                  <-------MYC3                                                                  <-------PIF5                                                                  ------->MYC3                                                                  ------->MYC4                                                                  ------->PIF5                                                                  ------->MYC2                         <-----------RAV1(1)                      <-------MYC2                        ------>ZmHOX2a(2)                        --------->TGA1a                      --------->ARR14(2)                         --------->O2                      <---------AGP1                             <---------TGA1a            --------->ARR14(2)                                   <---------PIF3(3)          <---------HSFB2a(1)               --------->ATHB12  --------->MYB46(3)          <---------HSFC1(2)         ----------->HVH21      --------->ARR14(2)          --------->HSFC1(2)         ----------->TGA1  ====================bZIP_DOF          --------->HSFB2a(1)      --------->O2        ---------->DOF2<---------ANAC46          -----         <---------KAN4(2)   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------ALFIN1           ----------- ------->DOF2         <---------ARR14(2)   <---------YAB1   <---------ARR14(2)          <---------ARR14(2) --ZmHOX2a(2) ------>ZmHOX2a(2)    <---------O2  <---------TOE2(3)<-------MYC4          <---------GLK1(2) ----ARR11(3)<------ZmHOX2a(2)<---------ANAC58 ----------->HVH21 <---------O2      --------->MYB52(1) -->GLK1(1) <---------ARR14(2)<---------ANAC58<---------WOX13(1) --------->PIF3(3)----------->HVH21   caaagggagggaacgatccgattggatctgtggcttctcgtgacgacgattgacgaagaaaggaaccacgtggtgaggatttagacgacggattgtgaaa  24444500                                                                                                    <                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                =====                                                                                                <----             --------->ALFIN1                                                                 <------ZmHOX2a(1)           <---------ANAC46                                                                 ---------         <---------ANAC58                                                                   ---------         <---------ANAC58              <---------TOE1(3)                           <------MYB46(1)---       ------->TEIL         <---------ARR14(2)                                     <---------HSFB2a(1) ----------->HVH21          <---------GLK1(2)   --------->LBD16                    --------->HSFB2a(1) ----------->TGA1----------->GT1       <---------TOE2(3)                        <------ZmHOX2a(1)<--- ---->MYB52(1)  <---------AtMYB61<---------TOE2(3) <-------GAMYB        <------ZmHOX2a(1) <---------AtLEC2 >GT1  <---------ARR14(2)   --------->ARR14(2)<---------LBD16    ---------->TaMYB80<------MYB83 <----   acggtgacgaatcgtgtggaggtgaaatcggattcgaggttagggttttctggggttattgagagggaatatgaggagattaggaaggttttgcaaggac  24444600                                                                    <-----------TGA1                                                                   --------->ANAC55(2)                                                                   <<<<<<<<<<HY5                                                                   <---------ANAC55(2)                                                                   <---------bZIP60(1)                                                                   <---------TGA2(1)                                                                   --------->O2                                                                   <---------O2                                                                   --------->bZIP60(1)    <---------MYB46(3)                                             --------->TGA2(1)   <---------AtMYB61                                               >>>>>>>>>>HY5   <---------DEAR3(1)                                            <---------TGA2(2)   --------->ALFIN1                                       <---------TOE2(1) <---------ANAC46           --------->ANAC58              <---------TOE1(1) ---------DEAR3(1)       ========================HOX2a_HOX2a    ----------->TGA1 --->PIF5                <------ZmHOX2a(1) ------>ZmHOX2a(2)  --------->YAB1 ------SPL7              =========================HOX2a_HOX2a <---------ICU4 -----ANAC58          xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)  <-------TEIL ---->TGA1a       <---------WOX13(1)  <------NtERF2      --------->SPL7 ====================================bZIP_DOF        <---------TOE1(2) -----ANAC58    --------->ATHB12     ------>NtERF2   <---------------AtSPL8 >ANAC58        <---------MYB46(3)  <---------DEAR3(1) <---------SPL7--------->TGA2(2) >ANAC58     <---------MYB46(3)  ----------->HVH21   <---------TOE2(2)  --------->ICU4 ------>ALFIN1 <---------YAB1 --------->TOE1(2) --------->ARR14(2)----------->STF1              <<<<< ----PIF5<---------AtMYB61---------->DOF2 <------ZmHOX2a(2)  --------->ICU4<---------YAB1    <<<<<<<< -----TGA1a --------->ALFIN1--------->ANAC58    <---------ARR14(2)<-----------STF1 <----------DOF2 <<   gtgcggtggtgatggtggtgattgagaggaaagctacgacggcgatcgcaaatcggaggtacgatgatgacgtcattgttatcgtctttgacttcttctt  24444700                                      --------->CCA1(2)                                      --------->GLK1(2)                                     <---------ARR14(2)                                     --------->ARR14(2)                                <---------YAB1                                     <---------GLK1(2)                       <---------ANAC55(1)                                     --------->ARR11(1)                      <---------ANAC55(2)                                    --------->HSFC1(2)                       <---------ANAC58                                    <---------HSFB2a(1)                      <---------ANAC58                                    *TSS                                     <---------ANAC46                                    <---------HSFC1(2)                       --------->ANAC55(2)                                    --------->HSFB2a(1)                     <-------TEIL    ----------->HVH21      >>>>>>>>>MYB98                                 --------->ARR11(1)    ----------->TGA1      ------>MYB46(1)   <---------WRKY12              --------->ARR14(2)  --------->At4g35610     --------->MYB52(1)<---------WRKY38(1) <---------GLK1(2)    --------->YAB1  <---------At4g35610     ------>MYB83--------->ARR14(1)        --------->ARR11(3)  --------->ICU4 <<<<TBF1               <---------MYB59<-------TEIL             <---------ARR11(3)  <---------YAB1 <TBF1                  --------->AtMYB61<---------ANAC46--------->AHL20(2)--------->CCA1(2) <<<<<<<TBF1    <----------ID1     ----------->ARR10  ----------->GT1     <---------ARR14(2) <-------   cttcttctgacgattttgaagacaaacctaacccaagaagattcggtgaacgaagaagattaaaaagattttctaagatacgtgttattatgaaataacc  24444800                                                                         <---------ICU4                                                                     <---------AHL20(2)                                                                <---------AHL20(2)                                                             <---------ARR11(3)                                                             --------->AHL20(2)                                                             <---------AHL20(1)                                               <---------YAB1--------->AHL20(1)  <-----------GT1                                       <----------DOF2  <------NtERF2--------->AHL20(2)                                 <-----------GT1   --------->DAG2   --------->AHL20(2)    <----------DOF2             <---------CCA1(2)---------->DOF2<---------YAB1 <---------MYB59 ----GT1                     <----------DOF2--------------->AGL15--------->AHL20(2)     <---------AHL20(2)   cctctacttttgtatttgatcatataggtcccttttatcttcttttcttataaaaggtgccaaaatattatttaattttgacttaactattttaagtcta  24444900                                    <---------AHL20(2)                                   --------->AHL20(2)                         --------->ANAC58     --------->ATHB51--------->ANAC58                                        <---------WOX13(1)     --------->AHL20(2)  --------->ANAC58                              ----------->GT1    --------->ICU4   --------->ANAC46    <-----------GT1            --------->MYB52(2)    <---------YAB1   --------->ANAC58  <-----------GT1          ----------->GT1       ------->TEIL   aatctcattatttatactcacataagcaaacaatagatttatttctctatttatctaattttcaataggttaattgttaattgatatgaattttgtccaa  24445000                                                       --------->ZAT2                                                       --------->ANAC46                                                       <---------ZAT2                                                       --------->TGA1a                                                       --------->O2                                                       <---------O2                                                      ------>MYB83                                                      ------>MYB46(1)                                                     <---------ALFIN1                                                    --------->MYB46(3)                                                  <xxxxxxxxxxxxxxxxsmallRNA(s)                <---------------AGL15             ------->TEIL  <---------AHL20(2)                --------------->AGL15            <xxxxxxxxxxxxxxxxsmallRNA(s)              --------->YAB1               ----------------->AGL2          <xxxxxxxxxxxxxxxxsmallRNA(s)     ----------->GT1  <---               ----------------->AGL3   xxxxxxxxxxxxxxxx>smallRNA(s)        <---------HSFB2a(2)  ----               <----------ID1          xxxxxxxxxxxxxxxx>smallRNA(s) --------->YAB1        <-------TEIL       <---------ARR11(3)           ----------->GT1--------->DEAR3(2)       --------->HSFB2a(2)  <---   gttatacaagttctaataccacaaatagtttgtgtaatatgtgaatagtctgaacccacctcgcatataatcaaacttctagtagttataaattcataag  24445100                                                                          ----------->GT1            --------->ANAC58                                            --------->ZAT14            --------->ANAC46   --------->YAB1                           <---------ZAT14            --------->ANAC58  <-------TEIL                       <---------YAB1                   <--       <---------YAB1  -------->HAHB4                           <---------AHL20(2)                --- ------GLK1(2)        --------->ICU4                          <---------YAB1                     ---- ----->ARR11(3)       <---------ATHB12                        <---------------AGL15              ---- ------ARR11(3)      <---------TOE2(3)           <-----------GT1--------->AHL20(2)         <---------AHL20(2)   atttttgttattctaagcaagttaatgatgcattcatggtcaatatcaagttaaccatttgtttattaatatagtatagtcaaactttcacattttatat  24445200  Previous    Next  AGI:  At1g65720.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN83711.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22167.1); similar to unknown [Populus trichocarpa] (GB:ABK94059.1) Range:  from: 24443922    to: 24444736    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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