Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------------->AtSPL8                    --------->AHL20(2)                     <---------TOE2(3)                    <---------AHL20(1)                     <---------TOE1(3)                    --------->AHL20(1)                     --------------->AtSPL3                    <---------AHL20(2)                    --------->MYB52(1)           <---------ARR11(3)                   <---------AHL20(2)               --------->AHL20(2)                 --------->ARR11(3)                   --------->AHL20(2)          ----------->GT1                        --------->RVE1(1)     <---------AHL20(2)             --------->AHL20(2)    <---------DOF5.7(2)     --------->AHL20(2)    --------->AHL20(2)              <---------AHL20(2)    <-----------GT1       ----------->GT1    <---------AHL20(2)             <---------AHL20(1)--------->AHL20(2)    --------->ANAC58 -------->AHL20(2)<---------------AGL15       <---------WOX13(1)           --------->ANAC46   <------ -------->GT1  <---------AHL20(2)  <---------AHL20(2)<---------AHL20(2)    --------->ANAC58   ------- -->DOF2       <---------YAB1      --------->AHL20(2)--------->AHL20(1)    <----------ID1 <---------LBD16   aagtaaataaatcgatttttattaaattagaaaacaatttaattttggattgaaaaaaattaacgtactagttcaaaacgccaagttaatatctcggata  24295700           <---------YAB1           --------->ICU4         --------->YAB1    <----------DOF2                                                                   --------->MYB52(1)  <---------TOE1(2)                                   <---------AGP1               <---------YAB1 ------>ZmHOX2a(1)                                    ------->TEIL              --------->ICU4 ---ARR14(2)          <----------DOF2    --------->WOX13(1)                   --------->YAB1 -->ARR14(2)--------->ATHB12           <---------ATHB12 ------>ZmHOX2a(2) <---------MYB52(2)   gtcctactttctcatgattcagttctttatagaccatctaaatcaatccgtctatggatctaaaatcgttcttgaaactaacatgatgaaacggtcccta  24295800                                                                                                   --         <------NtERF2                                                                             <-     <------MYB83             <---------At4g35610                                                  <-     <------MYB46(1)          --------->At4g35610          ---------->DOF2                       <---   <--------P             <-----------HVH21          ----------->GT1                      <---------ARR11(3) <------MYB46(1)     >>>>>>>>>TBF1    --------->ZAT6 <----------ID1     <---------MYB59   --------->ARR11(3) <------MYB83 ---------->DOF2 <---------ZAT2      ---------->DOF2<-----------HVH21      --------->ICU4   gataggttggccgaggcaaagaagaagaagtcagctcttaactctaaaaaccaaaaggaaaaaaagaagtcagaccttactcgttttgtaaagatttagt  24295900                                                                       ---------->DOF2                                                             --------->WRKY12                                                             --------->WRKY38(1)         --------->ZAT18              <-----------HVH21      --------->WRKY45 ------->At4g35610                 <-------MYC3              ----------->HVH21                ------- --------At4g35610         ----------->GT1              <---------ARR11(3)                   <------- -----NtERF2            --------->ALFIN1                --------->ARR11(3)             <---------ZAT18 ------WRKY38(1)<---------ZAT6     ------->MYC3        <---------CCA1(2)               --------->ZAT18   cagcgaagaagtcgactagtgttcgagtggggaaacacgttgtcaactcttaagtctaaatctttgaccccaaaaaagagagcaagttgtccactataat  24296000                                                                                    <---------ICU4                                                                                    --------->YAB1                                                                                   --------->ICU4                                                                                 --------->YAB1                                                                                <---------YAB1                                                                               --------->AHL20(1)                                                                             <---------YAB1                                                                           <---------ICU4                                                                           --------->ATHB51                                                                           -------->HAHB4                                                                           <---------AHL20(2)                                                                           -------->ATHB1                                                                           --------->YAB1                                                                           <--------HAHB4                                                                          <---------ATHB51                                                                          --------->ICU4                                                                          <---------YAB1                                                                        <--------HAHB4                                                                        <---------ICU4                                                                        --------->YAB1                                                        --------->YAB1 --------->ICU4  --------->MYB52(1)                                            --------->YAB1             --------->AHL20(2)                                          --------->ANAC58        --------->HSFB2a(2)  <---------ICU4                                          --------->AtLEC2    ------>ZmHOX2a(2)<---------AHL20(2)                                 ---------->DOF2  ----------->RAV1(1)--------->YAB1<---------YAB1                             ------>NtERF2--------->ANAC46  --------->ARR11(3) --------->AHL20(2) -->YAB1         <-----------------AGL1   --------->ANAC58  <---------ARR11(3) <---------AHL20(1) --YAB1        <----------DOF2 --------->AtMYB61 <----------ID1<----------DOF2--------->YAB1      <--   tctgtcttcttatgcaactttcatttttggccacctaaagtttcaagcaaaacaacaaaaatgatcttttagaataattattataataataacgacgatt  24296100                                              ------->GAMYB                                             --------->MYB46(3)           --------->ARR11(3)               -------->P--------->CCA1(2)           <---------ARR11(3)               ------>MYB83                                       <-----          <---------CCA1(2)                 --------->ANAC58                                ---------        ----------->TBP                     ------>MYB46(1)              ---------->DOF2    <--------   --------->ZAT6                        *TSS<---------ATHB12--------->TOE1(3)     --------->ARR11(3)  ------->TEIL            <------ZmHOX2a(1) --------->ANAC58 --------->TOE2(3)     <---------ARR11(3) -------TOE2(3)    ---------->DOF2 ------------>CBF  XXXXXXXXXXXXXXXXXXXX>MIR852   --------->AHL20(1)   aatgaactctatatatctcacaaaagaaggacatgtttgcaatcccaaccaagaagataaacaccttagcaaattcaaagaagaatatatcaaacatctt  24296200                                                                                   --------->ANAC46                               <------NtERF2                                      <---------LBD16                             <---------LBD16                                     --------->STY1(1)                             --------->ETT(1)                         <---------YAB1  <---------PCF5                             <---------ANAC46                        ------->TEIL<---------STY1(1)                          <-----------RAV1(1)                    <---------TOE2(3)--------->SPL7 -----DOF2              <---------ICU4                       ========================HOX2a_HOX2a >ARR11(3)          <---------YAB1                           ------>ZmHOX2a(1)------>ZmHOX2a(2) -ARR11(3)    --------->At4g35610                        ---------->ID1--------->ATHB12        <-----   ttgtttctaagaaataagctctctgattatgtcgggagcatcttctgtttcttctatttgttcctctaatgtatcattgatccctacgggacctcaagtg  24296300                    --------->CCA1(2)                   <---------ARR11(3)                   --------->ARR11(3)                                             <---------YAB1           --------->LBD16                                                    <-------MYC3          --------->LBD16                                                ============================          <---------LBD16                                                <------ZmHOX2a(2)         <---------LBD16                                                <---------ARR11(3)         <---------ANAC46  ---------->DOF2<----------DOF2           ---------->DOF2        <---------LBD16 --------->ANAC46--------->At4g35610    ---------->DOF2------->MYC3 ----ZAT6<---------HSFB2a(2) --------->DAG2             <----------DOF2 --------->ARR11(3)         <-   ttcatcaatttccgggggaaagatttacgaaaaggcttcatgagctttcttaagcctgctttgaaaaaagaaaagatcaacgtgtttattgacgaacaag  24296400                ------>MYB46(1)              <---------MYB59              <---------MYB111(1)             ----------------->AG                                              --------->TOE1(2)             --------->ANAC55(2)                                            --------->ARR11(3)             <---------ANAC55(2)                                            --------->ARR14(2)     ----------->GT1                  <------MYB83                          <---------ARR14(2)  --------->ALFIN1      <----------DOF2      ----------->GT1     <----------DOF2 =====HOX2a_HOX2a <---------ATHB12    <------MYB46(1)         <---------ARR11(3) -----ZmHOX2a(1)------>MYB83     <---------YAB1        <----------DOF2     <------ZmHOX2a(1)   <-----   aggagaggggcaaatacctaatcagtctttttgatacgataggtgagtcgaaaatcgctttggttatcttttctgaaggatactgcgagtcacattggtg  24296500                                                                                              =======                                                                                              ------>ZmHOX2a(2)                                                                                             ========                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                   --------->YAB1                           <--------                                                   <---------ICU4                           ---------                                                  <---------YAB1                    ----------->GT1                                                  --------->ICU4            =========================                                                --------->YAB1              ------>ZmHOX2a(2)<------ZmHOX2a(2)         ----------->GT1         <------ZmHOX2a(2)<---------ATHB12        --------->ARR11(3)<--------      --------->ZAT2<---------TOE2(3)           <---------ICU4            <---------ARR11(3)<--------      <---------ZAT2--------->ANAC58           --------->ICU4         <---------ANAC58     --------->RVE1(1) ----ANAC46         --------->ANAC58         --------->YAB1           <---------ANAC58  ---------->DOF2   tatggacgagctggtgaaaatcaaggaatacatggatcaaaacagactcataatcattccaatattctacaggcttgatctcgatgtggtaaaagatctt  24296600  Previous    Next  AGI:  At1g65390.1    Description:  ATPP2-A5; carbohydrate binding. Identical to Protein PHLOEM PROTEIN 2-LIKE A5 (PP2A5) [Arabidopsis Thaliana] (GB:Q9C5Q9;GB:O80811;GB:Q84JG0;GB:Q84K23;GB:Q84VK8); similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT2G32140.1); similar to unknown [Arabidopsis lyrata] (GB:AAO42473.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 24296141    to: 24298294    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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