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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<---------
DAG2
<---------
AHL20(2)
------>
NtERF2
<----------
DOF2
----------->
GT1
<---------
RAP2.6(2)
------->
TEIL
--------->
ZAT14
--------->
RAP2.6(3)
--------------->
AtSPL3
<---------
HSFB2a(2)
<----------
DOF2
--------------->
AtSPL8
--------->
HSFB2a(2)
--------->
TOE2(3)
<-----------
GT1
<-----------
GT1
----------------->
AGL3
<---------
ATHB12
<---------
AHL20(2)
<---------
ICU4
<----------
DOF2
<---------
ZAT14
---
cccaaacattaatgggcttttttatttcggcccaattgtacattatttctgtactttttcttcttttcatttttagaactgtagtaaatttcgaaatgca
23844200
<---------
ZAT2
--------->
LBD16
--------->
At4g35610
--------->
At5g28300
---
<---------
At4g35610
--------->
GLK1(2)
----------------
<---------
At4g35610
--------->
ANAC46
----------->
GT1
<--
------>
ICU4
<-----------
HVH21
--------->
ZAT2
<---------
LBD16
<------
ZmHOX2a(1)
---
atatttgtgagtttcccttgtcatatgatgttcttgcagctgtcttcacatcaccggagaaattcttgagaggacagtgaaattacttccatttctgaaa
23844300
----------->
GT1
<---------
At4g35610
--------->
ZAT2
<---------
ZAT2
--------->
At4g35610
<-----------
RAV1(2)
<-------
TEIL
<---------
ZAT2
--------->
ANAC46
<---------
MYB52(1)
--------->
ZAT2
--------->
ANAC58
--------------->
AGL15
--------->
ZAT14
------>
ARR14(2)
--------->
ANAC58
<---------------
AGL15
<---------
ZAT6
<---------
ZAT14
->
AGL1
<---------
ETT(2)
=============================================================
-------
ARR14(2)
------>
NtERF2
<----------
DOF2
<----------
DOF2
<-----------
GT1
------>
GLK1(2)
<---------
ALFIN1
<-----------------
AGL1
<-----------
GT1
<---------
YAB1
<--
aatccgagcttgatatcgacacccagctggtaaatctcccttctttttcaggtacttggaactttactagtcttagtttgagtatcactgttcagggttt
23844400
------>
ZmHOX2a(1)
<---------------
AGL15
--------------->
AGL15
--------->
TOE2(3)
--------->
CCA1(2)
<-----------------
AGL1
<----------
DOF2
----------------->
AGL1
<---------
ARR11(3)
--------->
ARR11(1)
----------------->
AG
--------->
GLK1(2)
<---------
ARR14(2)
===================
MADS_MADS
--------->
RVE1(1)
--------->
ARR11(3)
-------
YAB1
<---------
At4g35610
--------->
ARR11(3)
<<<<<<<<<
RAP2.2
<---------
ZAT6
<---------
YAB1
atgtttcctaaatgggtttatctgcttctgtccctaaaaatctttagcctttgtttttagatatggagttttctagtgttttgtatgttatgagttcagg
23844500
<---------
At4g35610
<-------
GAMYB
<---------
ZAT14
<-----------
GT1
<-----------
RAV1(1)
<-
--------->
DAG2
<-----------
GT1
<---------
ZAT18
<-
---------->
DOF2
<----------
DOF2
<------
ZmHOX2a(1)
*
TSS
<-----------
RAV1(1)
<-
cccaaaaagtttacatttttctttgattttacttcaggactgttgtgctc
atggcgatggaaaccttgagagaacatgttatgttgctgtgttatacgaa
23844600
==============
HOX2a_HOX2a
--------->
ARR14(2)
<---------
ARR14(2)
--------->
ARR11(3)
--------->
GLK1(2)
<---------
ARR11(3)
<---------
AGP1
<-----------
ARR10
<------
ZmHOX2a(2)
<------
ZmHOX2a(1)
<---------
ARR11(3)
=========================
HOX2a_HOX2a
<---------
ZAT14
--------->
ARR11(3)
<---------
ANAC58
------>
ZmHOX2a(2)
<---------
ANAC55(2)
--------->
ARR14(2)
---------->
DOF2
--------->
ICU4
<---------
TOE2(3)
<---------
ARR14(2)
===============
HOX2a_HOX2a
--------
ANAC58
<---------
ANAC58
<------
ZmHOX2a(2)
<---------
ZAT6
<-----------
GT1
--------
ANAC46
<---------
ANAC46
===============
HOX2a_HOX2a
--------->
ZAT18
--------
ANAC58
<---------
YAB1
<---------
YAB1
------>
ZmHOX2a(1)
--------->
ANAC46
tgcttgtattaagtatggttctgatggcgtatactatgaaggatctagtcctaaaaagatcagagttaagcgcaatactgagtttaacacactgttgaat
23844700
<---------
ANAC55(1)
<---------
ANAC58
--------->
ANAC55(2)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR11(3)
<------
MYB46(1)
--------->
GLK1(2)
<------
MYB83
<---------
AGP1
<------
--------->
MYB111(2)
<---------
ARR14(2)
--------->
MYB59
--------->
ARR14(2)
<---------
ARR11(3)
<----------
DOF2
<---------
ANAC46
--------->
ARR11(3)
--------->
ARR14(2)
<---------
ANAC58
<------
ZmHOX2a(2)
--------->
MYB111(1)
<---------
ARR11(1)
--------->
ARR11(3)
<---------
MYB46(3)
<-----------
ARR10
<---------
ARR11(3)
--------->
MYB46(2)
<---------
LBD16
------->
TEIL
--------->
ICU4
<---------------
AtSPL8
--------->
LBD16
<------
---------->
DOF2
<--------
P
<---------
ARR14(2)
<---------
TOE2(3)
<---------
DAG2
--------->
ANAC58
<---------
MYB55(1)
<-----------
HVH21
<---------
ANAC55(2)
<---------
DAG2
--------->
ANAC58
--------->
ATHB12
--------->
ZAT14
<---------
ARR14(1)
<----------
DOF2
--------->
At4g35610
<---------
ATHB12
<---------
ZAT14
<---------
CCA1(2)
gggctttatccaatttttggattagctaagcaaagatcaaagatttcaatctttggtaggtaccctgcagttctttcaccggatctgtttacgtatttac
23844800
<---------
YAB1
<-----------
GT1
--------->
YAB1
--------->
WOX13(1)
--------->
ANAC46
--------->
AtLEC2
<---------
DOF5.7(2)
--------->
ANAC58
<---------
MYB46(3)
<---------
ARR14(2)
<---------
MYB52(1)
<---------
TOE1(3)
--------->
LBD16
<---------
TOE2(3)
------>
ZmHOX2a(1)
<---------
LBD16
<---------
ANAC58
--------->
ICU4
-----
GT1
<---------
WRKY12
<---------
ANAC58
<---------
ATHB12
---
AHL20(2)
<---------
YAB1
--------->
ANAC58
----------->
GT1
attttccggtggtaaacgactctagtttggagactatgcttgaggttccaagcaattatccttctattaaacttgtggagttgtatttggaagtgaaatc
23844900
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<-----------------------
TaNAC69(2)
<---------
ANAC46
<---------
MYB46(3)
------>
ZmHOX2a(2)
<--------
P
--------->
ARR11(3)
<-----------
ARR10
--------->
ANAC58
--------->
ATHB12
--------->
ARR14(3)
--------->
ANAC46
==================
HOX2a_HOX2a
<---------
ARR11(3)
--------->
ANAC58
<------
ZmHOX2a(1)
<---------
ANAC58
--------->
GLK1(2)
<------
ZmHOX2a(1)
----------->
HVH21
<---------
At4g35610
<---------
ARR14(2)
--------->
At4g35610
<----
<---------
At4g35610
<---------
ZAT2
--------->
ARR11(3)
<---------
At4g35610
-----
--------->
At4g35610
------>
ZmHOX2a(1)
<---------
ARR14(3)
---------->
DOF2
---------->
DOF2
---
gacatctgaaggagttattgatcctgctgcttgttcatcgccattagaaaatcttggtagttccttgaaaagacagaggacccaagaagcaactggttat
23845000
>>>>>>>>>
GATA-4
<--------
>>>>>>>>>
GATA-2
<---------
----------->
GT1
--------->
MYB52(1)
--------->
At4g35610
<---------
At4g35610
--------->
ALFIN1
>>>>>>>>>
GATA-3
<---------
GLK1(2)
<-------
TEIL
<-------
GAMYB
<-----------
RAV1(2)
<---------
ANAC46
<---------
ARR14(2)
-----
ANAC55(2)
----------->
GT1
<-------
TEIL
--------->
ZAT6
--------->
At4g35610
---->
ANAC55(2)
<---------
AHL20(2)
<---------
TOE2(3)
--------->
MYB52(1)
<-----------
RAV1(2)
-------->
HVH21
--------->
AHL20(2)
----------->
GT1
<---------
ANAC46
>>>>>>>>>
GATA-1
<---------
At4g35610
gtgacacattcatctgttaaattagagagggttaatggtttaaaggttcagggagtggataacagtaacgggtggattgaagacgaggcagatgctgcat
23845100
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AGI:
At1g64250.1
Description:
transposable element gene. Mutator-like transposase family, has a 2.2e-20 P-value blast match to GB:AAA21566 mudrA of transposon=""MuDR"" (MuDr-element) (Zea mays)
Range:
from: 23844551
to: 23846914
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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