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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                  <---------DAG2                 <---------AHL20(2)
                         ------>NtERF2            <----------DOF2             ----------->GT1
                       <---------RAP2.6(2)      ------->TEIL                --------->ZAT14
                      --------->RAP2.6(3)   --------------->AtSPL3   <---------HSFB2a(2)
             <----------DOF2                --------------->AtSPL8   --------->HSFB2a(2)
   --------->TOE2(3) <-----------GT1      <-----------GT1     ----------------->AGL3
 <---------ATHB12<---------AHL20(2)    <---------ICU4      <----------DOF2  <---------ZAT14      ---
 
cccaaacattaatgggcttttttatttcggcccaattgtacattatttctgtactttttcttcttttcatttttagaactgtagtaaatttcgaaatgca  23844200
                                  <---------ZAT2   --------->LBD16
                                  --------->At4g35610                   --------->At5g28300      ---
                                  <---------At4g35610     --------->GLK1(2)         ----------------
                   <---------At4g35610      --------->ANAC46           ----------->GT1           <--
------>ICU4    <-----------HVH21  --------->ZAT2 <---------LBD16    <------ZmHOX2a(1)            ---
 
atatttgtgagtttcccttgtcatatgatgttcttgcagctgtcttcacatcaccggagaaattcttgagaggacagtgaaattacttccatttctgaaa  23844300
                        ----------->GT1
                     <---------At4g35610
                     --------->ZAT2
                     <---------ZAT2
                     --------->At4g35610
                   <-----------RAV1(2)           <-------TEIL
   <---------ZAT2--------->ANAC46              <---------MYB52(1)
   --------->ZAT2--------->ANAC58      --------------->AGL15                         --------->ZAT14
------>ARR14(2)  --------->ANAC58      <---------------AGL15      <---------ZAT6     <---------ZAT14
->AGL1      <---------ETT(2)           =============================================================
-------ARR14(2) ------>NtERF2          <----------DOF2    <----------DOF2        <-----------GT1
------>GLK1(2) <---------ALFIN1       <-----------------AGL1<-----------GT1     <---------YAB1   <--
 
aatccgagcttgatatcgacacccagctggtaaatctcccttctttttcaggtacttggaactttactagtcttagtttgagtatcactgttcagggttt  23844400
    ------>ZmHOX2a(1)
   <---------------AGL15
   --------------->AGL15
   --------->TOE2(3)                                     --------->CCA1(2)
  <-----------------AGL1                     <----------DOF2
  ----------------->AGL1           <---------ARR11(3)   --------->ARR11(1)
  ----------------->AG             --------->GLK1(2)    <---------ARR14(2)
===================MADS_MADS      --------->RVE1(1)     --------->ARR11(3)
-------YAB1     <---------At4g35610--------->ARR11(3)  <<<<<<<<<RAP2.2  <---------ZAT6<---------YAB1
 
atgtttcctaaatgggtttatctgcttctgtccctaaaaatctttagcctttgtttttagatatggagttttctagtgttttgtatgttatgagttcagg  23844500
                                          <---------At4g35610
                                     <-------GAMYB
                                     <---------ZAT14
       <-----------GT1              <-----------RAV1(1)                                           <-
  --------->DAG2         <-----------GT1  <---------ZAT18                                         <-
 ---------->DOF2 <----------DOF2 <------ZmHOX2a(1)*TSS                       <-----------RAV1(1)  <-
 
cccaaaaagtttacatttttctttgattttacttcaggactgttgtgctcatggcgatggaaaccttgagagaacatgttatgttgctgtgttatacgaa  23844600
                                        ==============HOX2a_HOX2a
                                      --------->ARR14(2)
                                      <---------ARR14(2)
                                      --------->ARR11(3)
                                      --------->GLK1(2)
                                      <---------ARR11(3)
                                      <---------AGP1
                                      <-----------ARR10<------ZmHOX2a(2)
                                     <------ZmHOX2a(1)<---------ARR11(3)
                                     =========================HOX2a_HOX2a
                          <---------ZAT14             --------->ARR11(3)
                       <---------ANAC58 ------>ZmHOX2a(2)
       <---------ANAC55(2)--------->ARR14(2)      ---------->DOF2      --------->ICU4
       <---------TOE2(3)  <---------ARR14(2)   ===============HOX2a_HOX2a
--------ANAC58         <---------ANAC58<------ZmHOX2a(2)   <---------ZAT6        <-----------GT1
--------ANAC46         <---------ANAC46===============HOX2a_HOX2a  --------->ZAT18
--------ANAC58   <---------YAB1 <---------YAB1 ------>ZmHOX2a(1)  --------->ANAC46
 
tgcttgtattaagtatggttctgatggcgtatactatgaaggatctagtcctaaaaagatcagagttaagcgcaatactgagtttaacacactgttgaat  23844700
                                                                                       <---------ANAC55(1)
                                                                                       <---------ANAC58
                                                                                       --------->ANAC55(2)
                                                                                ------>ZmHOX2a(2)
                                                                               <------ZmHOX2a(2)
                                                                              <---------ARR11(3)
                                                      <------MYB46(1)         --------->GLK1(2)
                                                      <------MYB83            <---------AGP1 <------
                                                     --------->MYB111(2)      <---------ARR14(2)
                                                     --------->MYB59          --------->ARR14(2)
                                      <---------ARR11(3)             <----------DOF2   <---------ANAC46
                                      --------->ARR11(3)          --------->ARR14(2)   <---------ANAC58
                                <------ZmHOX2a(2)    --------->MYB111(1)      <---------ARR11(1)
                               --------->ARR11(3)    <---------MYB46(3)       <-----------ARR10
                               <---------ARR11(3)    --------->MYB46(2)   <---------LBD16 ------->TEIL
                             --------->ICU4          <---------------AtSPL8 --------->LBD16  <------
                           ---------->DOF2          <--------P    <---------ARR14(2)  <---------TOE2(3)
         <---------DAG2 --------->ANAC58            <---------MYB55(1)<-----------HVH21<---------ANAC55(2)
<---------DAG2          --------->ANAC58      --------->ATHB12--------->ZAT14<---------ARR14(1)
<----------DOF2     --------->At4g35610      <---------ATHB12 <---------ZAT14<---------CCA1(2)
 
gggctttatccaatttttggattagctaagcaaagatcaaagatttcaatctttggtaggtaccctgcagttctttcaccggatctgtttacgtatttac  23844800
                                                      <---------YAB1
                                                     <-----------GT1
                                                    --------->YAB1
                                                 --------->WOX13(1)
                                              --------->ANAC46
                                              --------->AtLEC2
          <---------DOF5.7(2)                 --------->ANAC58
      <---------MYB46(3)                 <---------ARR14(2)
    <---------MYB52(1)                <---------TOE1(3)
   --------->LBD16                    <---------TOE2(3)  ------>ZmHOX2a(1)
 <---------LBD16                  <---------ANAC58 --------->ICU4
-----GT1 <---------WRKY12         <---------ANAC58 <---------ATHB12
---AHL20(2)                     <---------YAB1--------->ANAC58                         ----------->GT1
 
attttccggtggtaaacgactctagtttggagactatgcttgaggttccaagcaattatccttctattaaacttgtggagttgtatttggaagtgaaatc  23844900
                                                           <---------ANAC46
                                                           <---------ANAC58
                                                           <---------ANAC58
                         <---------ANAC58                 <-----------------------TaNAC69(2)
                         <---------ANAC46             <---------MYB46(3)
                  ------>ZmHOX2a(2)                  <--------P
                --------->ARR11(3)            <-----------ARR10                    --------->ANAC58
           --------->ATHB12                   --------->ARR14(3)                   --------->ANAC46
       ==================HOX2a_HOX2a          <---------ARR11(3)                   --------->ANAC58
       <------ZmHOX2a(1) <---------ANAC58     --------->GLK1(2)           <------ZmHOX2a(1)
  ----------->HVH21  <---------At4g35610      <---------ARR14(2)       --------->At4g35610     <----
<---------At4g35610  <---------ZAT2           --------->ARR11(3)       <---------At4g35610     -----
--------->At4g35610 ------>ZmHOX2a(1)         <---------ARR14(3)---------->DOF2  ---------->DOF2 ---
 
gacatctgaaggagttattgatcctgctgcttgttcatcgccattagaaaatcttggtagttccttgaaaagacagaggacccaagaagcaactggttat  23845000
                                                                       >>>>>>>>>GATA-4     <--------
                                                                       >>>>>>>>>GATA-2    <---------
          ----------->GT1                                     --------->MYB52(1)         --------->At4g35610
        <---------At4g35610                        --------->ALFIN1    >>>>>>>>>GATA-3 <---------GLK1(2)
     <-------TEIL         <-------GAMYB     <-----------RAV1(2) <---------ANAC46       <---------ARR14(2)
-----ANAC55(2)           ----------->GT1   <-------TEIL   --------->ZAT6              --------->At4g35610
---->ANAC55(2)<---------AHL20(2)       <---------TOE2(3)--------->MYB52(1)          <-----------RAV1(2)
-------->HVH21--------->AHL20(2)----------->GT1  <---------ANAC46      >>>>>>>>>GATA-1<---------At4g35610
 
gtgacacattcatctgttaaattagagagggttaatggtttaaaggttcagggagtggataacagtaacgggtggattgaagacgaggcagatgctgcat  23845100
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AGI:  At1g64250.1   
Description:  transposable element gene. Mutator-like transposase family, has a 2.2e-20 P-value blast match to GB:AAA21566 mudrA of transposon=""MuDR"" (MuDr-element) (Zea mays)
Range:  from: 23844551    to: 23846914    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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