Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
--------->
ARR11(3)
--------->
ANAC58
<---------
ARR14(3)
---------->
DOF2
<---------
ANAC58
--------->
TOE1(3)
<---------
ANAC58
--------->
TOE2(3)
<---------
WOX13(1)
XXX
<----------
DOF2
<-------
TEIL
<-----------
GT1
--------->
ARR14(3)
-------
MYB52(2)
---------->
DOF2
<----------
DOF2
--------->
ATHB12
<---------
ARR11(3)
>
GT1
--------->
AHL20(2)
----------->
GT1
<---------
AHL20(2)
------->
TEIL
<---------
HSFB2a(2)
actaactttaaatacaaaagcaatcccttcaatattgtaaagttcatgttttattcttttttgtcaatgtaacttcattgacttgttcaagaagaccttg
23765600
------>
MYB83
----------->
RAV1(1)
--------->
AtMYB61
--------->
DEAR3(2)
--------->
MYB46(3)
<---------
ARR14(2)
------->
GAMYB
--------->
ANAC46
--------->
MYB52(1)
--------->
GLK1(2)
------>
MYB46(1)
<---------
DOF5.7(2)
-
--------->
ARR11(3)
--------->
DOF5.7(2)
<
<---------
ARR11(3)
<---------
ANAC46
--------->
TOE2(3)
<-
----------->
GT1
--------->
MYB52(1)
------->
GAMYB
<---------
At4g35610
-----
XXXXXXXXXXXXXXXXX>
MIR846
<---------
DOF5.7(2)
--------->
MYB52(1)
--------->
CCA1(2)
------
aaccgaaatagttaaatcaaaaatctgttaacggaaccaacacaatctaacggcgttaacattcagataagggataatttcgtcaaaatcaaaaacaccc
23765700
<---------
ARR14(2)
----------->
RAV1(2)
=======================
RAV
--------->
AtLEC2
--------->
ANAC58
<<<<<<<<<<<<<<<<<
LFY
<---------
ANAC58
--------->
ANAC46
>>>>>>>>>>>>>>>>>
LFY
--------->
ANAC55(2)
--------->
ANAC58
----------->
RAV1(1)
<---------
ANAC55(2)
-------->
At4g35610
--------->
GLK1(2)
--------->
ARR11(3)
---------
At4g35610
--------->
ARR14(2)
<---------
ARR11(3)
--------
ALFIN1
--------->
TOE1(2)
<---------
ARR14(2)
--------->
GLK1(1)
<--------
---->
ANAC46
<---------
ALFIN1
--------->
ARR14(2)
------->
TEIL
<---------
ANAC55(1)
--->
MYB46(3)
--------->
At4g35610
<---------
ANAC46
<---------
CCA1(2)
----------->
GT1
<---------
ANAC58
tccgctccaagcaaacacctgagaatccaccagtggcatatttggaaactcatatcaaaccacatgaaccaagtgaaatcttcacttgaatacgtgtcac
23765800
<-----------
TGA1
--------->
bZIP60(1)
--------->
ANAC58
--------->
ANAC58
--------->
bZIP60(2)
<---------
bZIP60(1)
--------->
YAB1
--------->
ANAC46
<------
ZmHOX2a(2)
<---------
O2
--------->
ARR11(3)
<---------
WRKY38(1)
--------->
O2
------>
MYB46(1)
--------->
WRKY18(1)
<<<<<<<<<<
AtbZIP1
-------->
P
--------->
WOX13(1)
===============
------>
MYB83
--------->
At4g35610
<---------
TOE2(3)
------->
GAMYB
<-----------
HVH21
--------->
YAB1
<-----------
HVH21
--------->
MYB46(3)
<-----------
TGA1
--------->
MYB52(1)
<---------
ATHB12
---
<-----------
GT1
--------->
bZIP60(2)
<---------
ATHB51
-----
<<<<<<<<<
GT-1
--------->
ANAC46
--------->
MYB46(3)
--------->
ICU4
--------->
TGA1a
---
HVH21
<---------
ARR11(3)
<---------
At4g35610
<---------
MYB52(1)
<---------
TGA1a
tctattaaccaacaagatcataaaaaccccgtcatcagtcaacatccaacggttctaaatcactccgtttcgcaataatgtagtagccacgtcagagtta
23765900
<---------
DEAR3(1)
--------->
ATERF1(1)
<---------
ATERF1(1)
<---------
DEAR3(1)
--------->
KAN4(1)
<---------
KAN4(1)
--------->
ANAC46
----------->
HVH21
<---------
LBD16
--------->
DEAR3(1)
--------->
MYB52(1)
<---------
ETT(2)
--------->
LBD16
<---------
At4g35610
<---------
WRKY12
--------->
LBD16
--------->
At4g35610
--------->
ETT(2)
--------->
ANAC46
<---------
ZAT14
<---------
KAN4(2)
------>
NtERF2
<---------
HSFB2a(2)
--------->
ZAT14
--------->
LBD16
--------->
WRKY12
--------->
HSFB2a(2)
====
MYC_MYB
----------->
HVH21
<-----------
HVH21
<---------
LBD16
<-
------>
ZAT6
--------->
ZAT18
--------->
DEAR3(1)
<---------
AHL20(2)
<---------
--->
P
--------->
ZAT2
<---------
At5g28300
----------->
GT1
----------->
TBP
<---
ccagtacagacgagctcaccggaacaatctcaccgtcgacggcttatctaaaacaaggccaaagttaatttcccgaaaactataaatactcatctttttt
23766000
--------->
ATHB12
----------->
RAV1(1)
<---------
ALFIN1
--------->
DEAR3(1)
--------->
RAP2.6(2)
--------->
RAP2.3(2)
--------->
RAP2.3(1)
--------->
ATERF1(1)
<---------
ATERF1(1)
--------->
ZAT2
------>
NtERF2
<---------------
AGL15
<---------
ZAT2
--------->
ARR14(2)
--------->
At4g35610
--------->
ANAC58
<---------
ARR14(2)
<----------
DOF2
*
TSS
--------->
ANAC46
<---------
ANAC46
------>
ZmHOX2a(1)
--------->
AHL20(2)
<---------
At4g35610
<------
ZmHOX2a(1)
--------->
WOX13(1)
----------
GT1
<---------
AHL20(2)
--------->
DEAR3(1)
--------------->
AGL15
<---------
ATHB12
-
DOF2
<---------
ANAC58
--------->
ANAC58
<---------
ANAC58
------>
MYB83
--------
GT1
<---------
ANAC58
<---------
LBD16
<---------
ANAC58
------>
MYB46(1)
ttctcctctttcattttcttgccctag
attaaaatccctcgattcacgcagccgcaccattgcgtttcttcatcgaggaaaaaaaaaccaaatcaatctc
23766100
--------->
HSFB2a(1)
<---------
HSFC1(2)
--------->
LBD16
<---------
HSFB2a(2)
--------->
HSFB2a(2)
<---------
LBD16
--------->
ZAT14
<----------
DOF2
<---------
ZAT18
<---------
HSFB2a(1)
<-
--------->
ZAT18
--------->
HSFC1(2)
---------->
DOF2
--------->
ICU4
--------->
At4g35610
--------->
ARR11(3)
---------->
DOF2
<---
<---------
At4g35610
<---------
TOE2(3)
<---------
AtMYB61
<---
actcttgtagctcactattctccagaaatttctaagatttagctttctctaaagctcgatcgaactatctgggttttggtttaaaaggagatgatgagtt
23766200
<--------
<------
NtERF2
--------->
LBD16
------>
NtERF2
<------
NtERF2
<---------
RAP2.6(2)
<---------
ZAT2
<---------
ATERF1(2)
--------->
ZAT2
--------->
ATERF1(1)
--------->
At4g35610
<---------
ANAC58
<---------
At4g35610
<---------
LBD16
--------->
ANAC58
--------->
RAP2.6(3)
<---------
LBD16
<---------
ATERF1(1)
<---------
REM1(2)
<---------
GLK1(1)
<-------
GAMYB
<---------
At4g35610
--------->
GLK1(1)
<---------
ANAC58
--------->
At4g35610
<---------
ARR11(3)
--------->
HSFC1(2)
--------->
ZAT2
--------->
ARR11(3)
<---------
HSFC1(2)
<---------
ZAT2
<---------
MYB46(3)
--------------------->
WRI1
<---------
TOE1(2)
<------
MYB46(1)
<---------
ANAC46
<---------
ANAC58
--------
CCA1(2)
<---------
DEAR3(1)
<------
MYB83
<---------
ANAC58
--------->
MYB52(2)
------
ANAC58
--------->
ANAC58
<---------
MYB46(3)
------>
ZmHOX2a(1)
--------->
ATERF1(2)
------
ANAC58
--------->
ANAC46
<---------
WOX13(1)
<---------
ANAC58
<---------
ANAC58
cgtatcgcagcttacacggctgcgatgttttcgatttgggtttgtg
atggatggtttgaagatttcttgtcctgtggatgtttcgttgccggctaagctt
23766300
<---------
MYB46(3)
<---------
DEAR3(1)
--------->
ALFIN1
<---------
AtMYB61
<---------
ANAC46
<---------
AtMYB61
--------->
ALFIN1
----------->
HVH21
------>
ZmHOX2a(2)
<---------
ANAC58
----------->
GT1
--------->
At4g35610
<---------
ANAC46
--------->
ANAC58
<---------
ZAT6
<---------
At4g35610
<---------
ANAC58
--------->
ANAC58
<------
MYB83
<------
ZmHOX2a(2)
<---------
TOE1(3)
--------->
MYB46(3)
<---------
AtMYB61
<---------
ARR14(2)
<---------
ANAC46
--------->
DAG2
<---------
bZIP60(2)
<------
MYB46(1)
--------->
ARR14(2)
--------->
ALFIN1
---------->
DOF2
----------->
HVH21
--------->
ATHB12
-
TOE1(3)
--------->
ALFIN1
<---------
TOE2(3)
--------->
At4g35610
<-------
TEIL
<---------
MYB46(3)
atgggatctgaagggtgtggtggtggagttagggtttcgtcgaataaagcagataacaactgtgacaaggctcgtgtctcgattggtgttaattcttcaa
23766400
---------->
DOF2
--------->
ANAC58
<---------
ATHB51
--------->
ANAC58
<----------
DOF2
--------->
ICU4
--------->
YAB1
<-----------
GT1
--------->
ARR14(2)
--
<---------
ATHB12
--------->
At4g35610
<---------
ARR14(2)
<-----
<-------
GAMYB
--------->
WOX13(1)
<---------
At4g35610
<---------
LBD16
<---------
YAB1
ttgagcgttgtagtagtgcttcaatcaacaagaaag
gttagctaatttctcttcactttgacttcaaatttcatttggggattttgaaattattcttctt
23766500
Previous
Next
AGI:
At1g64050.1
Description:
similar to unnamed protein product [Vitis vinifera] (GB:CAO65897.1)
Range:
from: 23766028
to: 23769696
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version