Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------RVE1(1)                                       <---------ARR11(3)                                       <---------GLK1(2)                                <------ZmHOX2a(2)                                --------->CCA1(2)                               <---------ARR14(2)                               <---------ARR11(3)                               --------->ARR14(2)                       --------->ATHB12                   ---------->DOF2     --------->ARR11(3)              <---------YAB1            --------->ARR11(3) --------->ARR11(3)           ----------->HVH21    <----------DOF2          <---------YAB1   --------->YAB1      ---------->DOF2       --------->YAB1   caatgcaagtatatgattttgtaaagctatgaagatccaaagatttttaaaaagaagaaatcgtgacccatttatcatttggactttgggctaagagaaa  23474500                                                                     <---------GLK1(2)                                                                    ---------->DOF2                                                                  <---------HSFB2a(2)                                                             --------->YAB1   ------>MYB83                                             <---------ATHB12                      <--   ------>MYB46(1)                            --------->GLK1(2)   --------->HSFB2a(2)       --------- <---------MYB59  --------->YAB1            --------->HSFB2a(1) ------>ZmHOX2a(2)         --------->MYB52(1)   ataccaaatacaagacttaagcataacaaattcagactattttcaaagattccattaatccaatgatcccagaagctcgaattggagaacataaacggta  23474600                                                                                                   <-                                                                                                  <--                                                                                --------->LBD16   ---                                                                              <---------LBD16     <--                                                                             -------->P         <----                                                                          <---------MYB52(2)    -----                                                                    --------->ANAC58   ---------->DOF2                              --------->ARR14(2)                 XXXXXXXXXXXXXXXXXXXX>MIR169H-N<-----   <---------YAB1             <---------ARR14(2)                 XXXXXXXXXXXXXXXXXXXX>MIR169B/C<-----   --------->ICU4            <---------CCA1(2)  <---------DEAR3(1)  --------->ANAC58  <------ZmHOX2a(1) -------ZAT6          ------->TEIL           <---------DEAR3(1) XXXXXXXXXXXXXXXXXXXX>MIR169A<-------- >ANAC46           <---------YAB1   <----------TaMYB80        <-----------GT1--------->MYB52(1)------   ctgtgaagattaaaacagagtatgaatgctcaaatctgatattcccatcggcgatgaacaaaattaacccaagacaacttaccggagaggaaagacggtg  23474700  <---------MYB46(3)  ----------->GT1 <---------AtMYB61 <---------ANAC46 --------->ALFIN1 --------MYB46(3) -------AtMYB61 ------>ALFIN1 -------DEAR3(1) -----MYB46(3)                                         --------->YAB1 ---->MYB55(2)                            --------->ARR14(2)         --------->GLK1(1) ----DEAR3(1)                             <---------ARR14(2)         <---------GLK1(1)              < ----AtMYB61 --------->ZAT2              <---------At4g35610--------->ANAC58                        - -DEAR3(1)   <---------ZAT2              --------->At4g35610--------->ANAC58                  ------>ZmHOX2a(1) --->ALFIN1  --------->At4g35610      <-------TEIL    <---------ATHB12               <---------YAB1<-   gtggtggtgataacgagctcagagattggattgaagaagatgcagatgcgatttcaatgaaaacgaaatggaaatcgatagtcgattttgatagtcctgg  23474800                                          --------->RVE1(1)                                         <---------ARR11(3)                                         --------->ARR11(3)                                         --------->GLK1(2)                                         <-----------ARR10                                        <---------GLK1(2)                                    <------NtERF2                                   ------>NtERF2                                   ----------->RAV1(1)                            <-----------RAV1(1)                                  --------->PCF5                                 ------>ZmHOX2a(2)                                  --------->RAP2.3(3)                           <------ZmHOX2a(2)                                 <---------ATERF1(1)                           <---------ARR14(2)                                 --------->ATERF1(1)                           --------->ARR14(2)                                 <------NtERF2                                 --------->ARR11(3)                                 ------>NtERF2                                 --------->GLK1(2)                                ------>NtERF2  --------->ZAT14                 <---------ARR11(3)                                <---------DEAR3(2)                             <---------AGP1                                <---------ORA47(2)                        ---------->DOF2       --------->TOE1(3)        <---------RAP2.3(1)                     ===============HOX2a_HOX2a       --------->TOE2(3)        <---------DEAR4(2)                      ================HOX2a_HOX2a     --------->ANAC58           <---------ATERF1(1)               ===================HOX2a_HOX2a     --------->ANAC58          <---------RAP2.3(2)                ------>ZmHOX2a(2)                 < ------>NtERF2                 <---------RAP2.3(3)                =============HOX2a_HOX2a    <------ ---------ETT(1)               <---------RAP2.6(2)          <----------DOF2   <------ZmHOX2a(1)     < ---------->HVH21              <---------DEAR3(1)  <---------ATHB12     ------>ZmHOX2a(1)     ------- -----NtERF2                  --------->RAP2.6(3)--------->WOX13(1)    --------->TOE2(3)      -------   ctccgacaagcttaacgctgtctagtaagaagggcggccccaaaatctctgcaatcactcccctttgatccctccttaaaggatctgttggagaaatttt  23474900                           <---------TOE2(3)             <---------CCA1(1)                          --------->YAB1                 <---------RVE1(1)                         <---------YAB1 --------->ARR11(3)       <----------DOF2  <---------AHL20(1)              --------->ARR11(3)  *TSS <---------DAG2   --------->AHL20(2)    <---------TOE1(3)                         --------->YAB1 ---------TOE1(3)       <---------AHL20(2)    <---------TOE2(3)            <---------ANAC58 ---AHL20(2)           --------->YAB1   <---------AHL20(1)                 <---------ANAC46     ----- ---------TOE2(3)     <---------YAB1    --------->AHL20(1)              --------->DAG2 <---------YAB1 -->AHL20(1)      <---------DAG2        <---------ARR11(3)          --------->YAB1   --------->YAB1 - -->AHL20(2)      <----------DOF2  <---------TOE2(3)    <---------ARR11(3) <---------ANAC58--------->YAB1   ttaaggctacttttgctcaactttattataatgttttaagaatattttagggttttgagatatttgttaaacataaggcttgtagttttataataatcct  23475000                                                <---------At4g35610                                                --------->At4g35610                                         <-----------HVH21              --------->ANAC46    ---------                                        <---------ANAC58             <------ZmHOX2a(2)      <--------   <---------bZIP60(2)                  <---------ANAC58            <-----------HVH21  --------->YAB1 ->ZmHOX2a(1)                          <-------TEIL        <---------ZAT18            <---------YAB1 ---------->HVH21                     --------->ALFIN1     --------->ZAT18    <---------ATHB12   ctctgacatggtttttggttttgttttgaaggctgtacaagtgcgtcaagagctgaataagtgggcttccgatcacaccaatggtctcatcatagacctt  23475100                ---------->DOF2             <---------MYB52(1)         <------ZmHOX2a(2)        --------->ARR14(2)        <---------ARR14(2)                  --------->ANAC58        --------->TCP20<---------ARR14(2)   --------->ANAC58  ------>ZmHOX2a(1)    --------->ARR14(2)--------->ARR14(2)  ===============HOX2a_HOX2a          <---------TOE2(3)  ==============HOX2a_HOX2a    <---------TOE2(3)                   ----------->GT1              ----- >ARR11(3) ----------->GT1     <---------TOE1(3)--------------->AtSPL8                         ------ -ARR11(3)------>ZmHOX2a(2)   <-----------RAV1(2)        ---------->DOF2                      -------   cttcctcgtggatccgttaaaagcgaaaccgttcaggtttatggaaacgcattgtacttcaaaggagcatgggaaaacaaatttgacaagtcttcaacca  23475200                                                                                <---------MYB46(3)                                                                               <---------AtMYB61                                  ------->TEIL                             <---------------------WRI1                                <-------MYC2                            <---------ANAC58                                ------->MYC4                   <---------AHL20(1)                                <-------MYC3   --------->ANAC58<---------ARR11(3)                            <-------TEIL--------->YAB1---------->DOF2   <---------ANAC46 ----->DOF2         ---------->DOF2  <----------DOF2<---------YAB1      <---------ANAC58 ->GAMYB        --------->ANAC58------->MYC3   --------->GLK1(2)  <---------AHL20(2)         ------>ZmHOX2a(1) -->MYB46(3)    --------->ANAC58------->MYC2   --------->ANAC58--------->AHL20(1)        <---------ARR11(3)   aagacaacgagtttcaccaaggcaaagaagtacatgtgcctttcatgagaagctatgaaagtcaatatataatggcttgcgatggtttcaaggtccttgg  23475300                                    --------->KAN4(2)                                               -                                   <---------HSFC1(2)                                              <-                                   <---------HSFB2a(1)                                           <---                                   --------->HSFB2a(1)                                           ----                               --------->ANAC58                                                 -----                               --------->ANAC58                         <---------WOX13(1)      <----                             ------>MYB46(1)                          --------->ATHB12        <------                             ------>MYB83                          --------->YAB1             <------                             --------->MYB52(1)              ------>NtERF2--------->ATHB12    -------         ------>MYB46(1)    --------->MYB55(1)              --------->LBD16                   -------         ------>MYB83      <---------MYB59                 --------->HSFB2a(2)               <-------         -------->P        <---------MYB46(2)       <---------CCA1(2)--------->ICU4          <-------  --------->AtMYB61  <---------YAB1--------->HSFC1(2)      <---------HSFB2a(2)               --------   actaccataccaacaaggccttgatgataccaaacgaaaattctcaatctatttctatcttcccgactagaatgatggattggatagtcttgtcaatgat  23475400  Previous    Next  AGI:  At1g63270.1    Description:  ATNAP10 (Arabidopsis thaliana non-intrinsic ABC protein 10). Identical to Putative non-intrinsic ABC protein 10 (NAP10) [Arabidopsis Thaliana] (GB:Q9C8T1); similar to ATNAP14 (Non-intrinsic ABC protein 14) [Arabidopsis thaliana] (TAIR:AT5G14100.1); similar to ABC transporter family protein [Olimarabidopsis pumila] (GB:ABA18088.1); contains InterPro domain ABC transporter, heme export, CcmA; (InterPro:IPR005895); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 23473329    to: 23474902    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g63280.1    Description:  serpin-related / serine protease inhibitor-related. similar to serpin family protein / serine protease inhibitor family protein [Arabidopsis thaliana] (TAIR:AT2G14540.1); similar to serpin-like protein [Citrus x paradisi] (GB:AAN76362.1); contains InterPro domain Protease inhibitor I4, serpin; (InterPro:IPR000215); contains InterPro domain Protease inhibitor I4, serpin, plant (InterPro:IPR015554) Range:  from: 23475008    to: 23475370    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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