Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->YAB1     <<<<<<<<<ARR2                                         <---------GLK1(2)     <---------ATHB12     <-------MYC3               --------->ZAT14     <<<<<<<<<ARR1        ------->MYC3               <---------ZAT14 -------->ANAC58  --------->YAB1                     --------->ZAT18 -------->ANAC58  <---------ICU4                ---------->DOF2 -------->ANAC46 --------->ICU4            <------ZmHOX2a(2)                 ----------->GT1 --ANAC58        <---------ATHB12         --------->ARR11(3)                <-----------------------TaNAC69(2) --ANAC58   --------->ANAC46              <---------ARR11(3)          <---------ATHB12           <---   acacacaatcataaacccaataatcacacatggataacaaatgagatcactaaagttcacagaaactttccaattagtaatgtaaaatcgctggaaacca  23234200                                                                           <---------TOE1(2)      ---                                                                           <---------TOE2(2)  -------                                                ----------->GT1           ------>ZmHOX2a(1)  <-------                                         <---------------AGL15            ===========================               --------->MYB52(1)        =================================================MADS_MADS         ----------->RAV1(1)             --------->TOE2(3)                ===========================    <---------ANAC58                   -------->P                         <---------------AGL15   ---    <---------ANAC58                <---------DAG2                        --------------->AGL15   ---    <---------ANAC46    --------->ANAC58 --------->TOE1(3)      <-------TEIL              ------->TEIL <-----------RAV1(1)    --------->ANAC58<-----------------AGL1 --------->GLK1(2)          --------->ARR14(2) ------YAB1 --------->YAB1          --------->AtMYB61          --------->CCA1(2)   <------ZmHOX2a(1)   ttaatgtcgtccaacaataacgaaacgagcaaaaaacaccttaccctaactcgaaaaactctgagattcaagtttcctatgtttaggaactgaatctacc  23234300                              --------->ANAC58                             ----------------->AG                             ----------------->AGL2                             <-----------------AG                             ----------------->AGL3                             <-----------------AGL1                               <---------WRKY12                     <---------DAG2     <---------GLK1(1)        <------NtERF2    <---------WRKY38(1) ------>AtLEC2     ------->TEIL--------->LBD16                  --------->LBD16  --------->WRKY18(1) ->P               -------->P<-----------------AGL3            <---------ANAC46<------MYB83 ----GT1    <---------AHL20(2)<---------------AGL15           <---------LBD16  <---------ANAC46 ==============================================MADS_MADS  <---------ANAC58     <------MYB46(1) ==============================================MADS_MADS  --------->YAB1      <---------MYB46(3)    < --->MYB83  --------->AHL20(2)--------->ANAC58        --------->MYB46(3)      --------->MYB55(2) ---- --->MYB46(1)     <-----------GT1       --------->GLK1(1) <---------ANAC58  <---------MYB52(1)  <----   atccaaaatccaaataaaatcaacctttcgacccgaaaatggaaatcgaactctgaacaatcgtgccggagaagaagcgttgggtcaatgtagagaaata  23234400                                               --------->At4g35610                                           --------->ARR14(2)                                           <---------ARR14(2)                                         <---------DEAR3(2)                                         <---------MYB46(3)                                      <-----------HVH21                                     --------->bZIP60(1)                                     <---------bZIP60(1)                                     --------->O2                                           ------>NtERF2            ----------->TBP          <---------TGA1a                     ----------->GT1   --------->DEAR3(1)  <------NtERF2                      --------->TGA1a                  <---------MYB52(1)----------->HVH21 *TSS    <---------YAB1              <---------O2 --------->ZAT14   <------MYB83<---------AHL20(2) ---------DEAR3(1)                --------->ANAC46<---------ZAT14   <------MYB46(1)     --------->ANAC58 ----->ANAC46          <---------TOE2(3)<---------DEAR3(1)    <------ZmHOX2a(1)--------->AHL20(2) ---TEIL--------->AHL20(2)    <-----------GT1  <---------At4g35610  <---------DEAR3(2)  --------->ANAC58   cgtcgtcgattaatataaaaccactaatgttattacacgacgtcggttctgctacagtgtaacaggaagtcggttttgttataaaatgacacgacgacgt  23234500                                             <-----------GT1                                         <---------ZAT6                                       ----------->GT1                                --------->ICU4   --------->ANAC46               --------->AHL20(2)                  <---------TOE2(3) <------ZmHOX2a(1)    ------>MYB46(1)        ----------->TBP------                <---------AHL20(2) <---------YAB1--------->ANAC58              <---------AHL20(1)            ----------->GT1   --------->ATHB12   --------->ANAC58              --------->AHL20(1)     ---------->DOF2       --------->ANAC55(2)-------->P ------>MYB83         --------->AHL20(2)<----   ttttatgtaaagaactgtttaatgaataaacgtgattaggatagtattaacccgaaaccaaacactcttatatcgaacaaatatatatacactcgtattt  23234600                                                         <---------ARR14(2)                                             --------->ANAC46                                     ---                                             --------->ANAC58                                     ---                                             --------->ANAC58                                 -------                                         --------->HSFB2a(2)                                 <------NtERF2                                         <---------HSFC1(1)                                 <--------                                         --------->HSFC1(1)                                <---------RAP2.6(2)       --------->ANAC58                  <---------HSFB2a(2)                               <---------ANAC58       --------->ANAC58            --------->ARR14(2)    --------->ARR11(3)                <---------ANAC58     ---------->DOF2               <---------ARR14(2)    --------->ARR14(2)                <---------ANAC46 --->ICU4                          <---------ARR11(3)    <---------ARR11(3)               <---------LBD16 -----AHL20(2)       *TSS          --------->ARR11(3)  ----------->ARR10         <-------TEIL------>NtERF2   attcgcctaaagccaaaaacccattagcccctcaaggtatcttccagaagcaacgagaagacctgcaagagaaaattttcagattcaactatggcggacg  23234700                                                                                          ------>MYB83                                                                                      ------>MYB83                                                                                      ------>MYB46(1)                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                      -------->P                                                                                     --------->MYB55(1)                                                                                    --------->MYB46(3)                                                                               ------>MYB83<---------ATHB12                                                                               ------>MYB46(1)                                                                             <---------MYB46(2)                                                                   --------->ANAC46 --------->DEAR3(1)                      <----------DOF2                              --------->ANAC58 --------->AtMYB61                    <---------At4g35610                            --------->ANAC58 <---------MYB111(2)                    --------->At4g35610           <-------GAMYB --------->At1g77200 <---------MYB46(2)                    --------->ZAT2         --------->ARR14(2)   ----------->HVH21   <---------MYB111(1)                    <---------ZAT2         <---------ARR14(2)   --------->DEAR3(1)  <---------MYB55(2)                --------->ANAC58  ----------->HVH21     <---------ICU4       <---------MYB111(1)             <---------ARR14(2)  <---------MYB52(1)     <-----------GT1 <---------ATHB12  ------>MYB46(1)             --------->ARR14(2)  <-----------HVH21--------->At5g28300  --------->ANAC58<---------ATHB12  ---------->DOF2  ------->TEIL --------->At4g35610  --------->WOX13(1)--------->ANAC58--------->MYB46(3) ------>ANAC58  --------->ANAC46--------->LBD16--------->LBD16 --------->DEAR3(2)--------->ZAT6 ------>ANAC58  --------->ANAC58<---------At4g35610<---------MYB52(1) --------->WOX13(1) --------->WOX13(1) -->SPL7---------->DOF2       <---------LBD16<---------LBD16--------->ZAT14  <---------MYB59--------- -SPL7  --------->MYB52(1)   ------>ZmHOX2a(1) ------>NtERF2<---------ZAT14------->TEIL<---------MYB55(2)   aagcaaaagctaaaggaaacgcagctttctcctccggtgacttcaattccgccgttaatcacttcaccgacgcaatcaacctaacaccaaccaatcacgt  23234800                        --------->ANAC58                        <---------ANAC55(2)                        --------->ANAC46                        --------->ANAC55(2)                        --------->ANAC58                   <---------ZAT2                   <---------At4g35610                   --------->At4g35610                   --------->ZAT2                                                                   -                --------->At4g35610                                                                --                --------->LBD16                   <---------ARR11(3)                        <--------                <---------At4g35610               --------->ARR11(3)                     <---------GLK1(2)             --------->SPL7------->TEIL         ------->TEIL                             <---------ARR14(2)            --------->ARR14(2)       <---------ICU4                                      --------->ARR14(2)            <---------ARR14(2)       --------->ZAT6                                  <---------------    --------->HSFB2a(2) --------->ANAC55(1) <---------------------WRI1               ---------------- >YAB1      <---------MYB52(1)      <---------ATHB12                     <-------GAMYB---------------   tctcttctcaaaccgttccgctgctcacgcatcgcttaatcactacgacgaagctctctcagacgcgaagaagactgttgaacttaaaccagattgggga  23234900                                                                <---------ARR14(2)                                                             <---------ANAC58                      <-                       <---------ZAT18                       <---------ANAC46                      --                     <---------At4g35610                     <---------ANAC58                     <--                     --------->At4g35610                    <------NtERF2                         <--                  <---------At4g35610                   --------->REM1(2)                         <--                  --------->ABI4(2)                    --------->ALFIN1                   --------->ANAC58 ---------->GT1   <---------ZAT2                      --------->LBD16                     --------->ANAC46 ------->DAG2    --------->ALFIN1                    <---------ANAC46                     --------->ANAC58 -LBD16       <---------DEAR3(1)                     <---------ANAC58      <---------ANAC58  -------- --AG     <---------RAP2.6(3)              <XXXXXXXXXXXXXXXXXXXXMIR396A    <---------ANAC58<---------MYB52(2) ->AGL1  --------->RAP2.6(2) --------->MYB59         <---------ANAC58---------->DOF2   ------>ZmHOX2a(2) >AGL15  --------->DEAR3(1)<---------MYB52(1)   ---------->DOF2 --------->ARR14(2)<---------WOX13(1)   aaaggttatagccgtctcggtgctgctcacttaggtctaaatcagttcgatgaagccgtggaggcgtattcgaaagggcttgagattgatccaagtaacg  23235000                                                           <------NtERF2                                                         --------->ANAC46                                                        --------->LBD16        <----------DOF2                                                        <---------At4g35610   <---------ANAC58                                                       <---------ANAC58       <---------ANAC58                                                       <---------ANAC58<------MYB83                                                    <---------ARR14(2)--------->MYB55(2)                                               --------->ANAC55(2)    <---------MYB46(3)      <---------GLK1(1)                        --------->ANAC58       --------->MYB46(2) --------HSFB2a(1)                          ----------->HVH21        <---------MYB55(1) ------->HSFB2a(1)           <---------HSFC1(2)<---------ANAC55(2)  <---------MYB52(1) -------TOE2(2)              --------->HSFC1(2)--------->ANAC58--------->ARR14(2)                 <-- -------TOE1(2)           ---------->DOF2  <-----------HVH21   <---------ARR14(2)  <---------LBD16--- -------TOE2(3)  --------->At4g35610      --------->ANAC46------>NtERF2<------MYB46(1)----------->HVH21 ->MYB52(1)      <---------At4g35610<---------ANAC46--------->ARR14(2)<---------AtMYB61    --------->LBD16   aaggtttgaaatcaggtttagctgatgcgaaagcttctgcgtctaggtcacgcgcttccgcgcccaatccgtttggtgatgcttttcagggaccggagat  23235100  Previous    Next  AGI:  At1g62730.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN63693.1); contains InterPro domain Terpenoid synthase (InterPro:IPR008949) Range:  from: 23232724    to: 23234401    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g62740.1    Description:  stress-inducible protein, putative. similar to stress-inducible protein, putative [Arabidopsis thaliana] (TAIR:AT1G12270.1); similar to stress-inducible protein, putative [Arabidopsis thaliana] (TAIR:AT4G12400.1); similar to stress-inducible protein, putative [Arabidopsis thaliana] (TAIR:AT4G12400.2); similar to unknown [Picea sitchensis] (GB:ABK24283.1); similar to unknown [Populus trichocarpa] (GB:ABK95532.1); similar to hypothetical protein OsI_008103 [Oryza sativa (indica cultivar-group)] (GB:EAY86870.1); contains InterPro domain Heat shock chaperonin-binding (InterPro:IPR006636); contains InterPro domain Tetratricopeptide-like helical; ( Range:  from: 23234621    to: 23237208    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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