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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                              ------
                                                      --------->ATHB51                      --------
                                                      --------->ATHB12                      --------
                                                     <---------YAB1                    --------->GLK1(1)
                                                    --------->TOE2(3)                  <---------GLK1(1)
                  ----------->GT1             ----------->GT1                         --------->ARR11(3)
                  <---------ZAT6         ------>ZmHOX2a(1)                            <---------ARR11(3)
               --------->DAG2            --------->HSFB2a(2)               ------>ZmHOX2a(1)--------
              ---------->DOF2            <---------HSFB2a(2)              <---------ANAC46  --------
              <---------ZAT14        <---------ARR14(2)        --------->YAB1    ---------->DOF2
           ----------->GT1           --------->GLK1(2)<---------ICU4      --------->TOE2(3) <-------
      ---------->DOF2           ---------->DOF2  <-----------GT1     <---------ICU4  <------ZmHOX2a(1)
 
ctaaaatacaaaagaagtaaagtgttacacatttgaaaagaatcctagaatgttacattattgcaattttaaaaattccttataaaaaggatatcaagta  23085400
                                                             --------->HSFB2a(1)
                                                             <---------HSFC1(2)
                                                             --------->HSFC1(2)
                                                             <---------HSFB2a(1)
                                                          <------ZmHOX2a(1)
                                                        <---------TOE2(3)
                                                   <----------DOF2
                                                  <---------------AGL15
                                                  --------------->AGL15
               <---------------AGL15             ----------------->AGL1               <---------YAB1
               ===================================================MADS_MADS    <------MYB46(1)
--->AHL20(2)   --------------->AGL15             ========================================MADS_MADS
->ANAC58       ====================================================MADS_MADS   <------MYB83
--->GT1        ------>ZmHOX2a(1)                 <-----------------AG          ----------->GT1
->ANAC58       --------->LBD16                   <-----------------AGL3       --------->MYB59
->ANAC55(2)<---------ARR14(2)                    <-----------------AGL1----------------->AGL3
--ANAC55(2)--------->ARR14(2)                    ----------------->AGL3<-----------------AG
 
attttcgaaatcagtatcctgaaaatggaaaatgtaagtgatagaactagtctcctttttaggaagggtctcttctcaaatttggttatatgattcaaac  23085500
                                                            <---------YAB1
                                                          --------->ATHB12
                                                          --------->ATHB51
                                                          <---------ICU4
                                                         <---------YAB1
                                                         --------->ICU4   ----------->GT1
                         --------->YAB1                --------->YAB1     <---------ANAC46
                      --------->WOX13(1)        <---------GLK1(1)   <----------DOF2<-----------GT1
 
gatgggctcaactagtaaactttgtcattcagagttgtttcgaaatacttgaaatctctcattattgttctcttttttcgtaaatttttcaaactatttc  23085600
              --------->DAG2
            ---------->DOF2
        --------------->AGL15
        <---------------AGL15
        ------->GAMYB
       <-----------------AGL1
       <-----------------AG                                                              ---------->DOF2
     <-----------GT1                         --------->AHL20(2)                  --------->WOX13(1)
--------->AHL20(2)                       ----------->GT1                      ------->TEIL
<---------AHL20(2)      ---------->DOF2<---------ANAC46    ---------->DOF2 <---------ATHB12  -------
 
gaataaaataaccccaaaagggaagagaaaagaaaccaattgaagtgtataaatagagacccaaaaggaaaatgccaaatgaatcaatctcttaaagaaa  23085700
                                          --------->ANAC58
      <------MYB83                        --------->ANAC58    --------->TOE1(3)
      <------MYB46(1)                     --------->ANAC46    <----------DOF2    ------------>CBF
    <--------P                  <-------TEIL                  --------->TOE2(3) <-----------GT1
--->DOF2   <-------TEIL --------->At4g35610             <----------DOF2   <----------DOF2<---------AtLEC2
 
ggagatggtaggggtccatctatgatgtgctcacatacatgctccacgaactcttgtttcttttactttaacttcttcttttttaacaatttgaatgaaa  23085800
                                                                  --------->ANAC58
                                                          --------->AHL20(2)
                                                          --------->AHL20(1)
                                                          <---------AHL20(2)
                                                          <---------AHL20(1)
                                                      --------->AHL20(2)
                                                      <---------AHL20(2)
                                                     <---------AHL20(2)                    ---------
                                                 <---------AHL20(2)                      <----------
                                                 --------->AHL20(1)                      -----------
                                  *TSS           --------->AHL20(2)                     <-----------
    <-----------GT1         --------->ANAC58     <---------AHL20(1)                     ------------
  <---------AHL20(2)        --------->ANAC58    --------->AHL20(2)--------->ANAC58      ------------
<-----------TBP        <---------YAB1        <---------GLK1(2)  ---------->DOF2       ------>NtERF2
 
catatttatacatcttatctatgactatgactcgcacatattttctcagaattttatttattttattgaaagccaatctctctcatttgcgcctataaat  23085900
  ------->GAMYB
-------->P
>AHL20(2)                      --------->ANAC46
-----AGL15                     --------->ANAC58
---->AGL15                     --------->ANAC58
------AGL3                   ---------->DOF2  --------->ANAC46
----->AGL3        --------->ANAC46  <---------MYB52(2)                       ---------->DOF2    ----
----->AGL2    <---------HSFB2a(2) --------->WOX13(1) ----------->GT1     <----------DOF2    --------
 
agcaaccctctctcattctacaagtctcacatcaaagcaattaacaaatacacaacttgtaacttcaaatagattactttcaaagaagagagagagaaag  23086000
                                                                                        <---------ANAC58
                             <---------ZAT18                                            <---------ANAC58
                      <---------HSFB2a(2)                        ------>MYB83         ------->TEIL
                      --------->HSFB2a(2)                        ------>MYB46(1)   <---------ATHB12
------>DOF2      <---------HSFC1(2)                            <---------MYB59 <---------ATHB12
-->DOF2          --------->HSFC1(2)                            --------->AtMYB61 --------->WOX13(1)-
 
aaagatggagaagaacatgaagtttccagtagtagacttgtccaagctcaatggggaagagagagaccaaaccatggctctaatcaatgaagcttgtgag  23086100
                                                                                      <---------ARR11(3)
                                                                                    <-------TEIL
                                                                                   <--------P
                                                                                <---------TOE2(3)
                                                                     --------------->AGL15
                           <---------ARR11(3)                        <---------------AGL15
                     --------->ANAC46                               <-----------------AGL2
            --------------->AtSPL3                                  <-----------------AGL3
            <---------------AtSPL8                             --------->STY1(2)<---------TOE1(3)
            --------------->AtSPL8                   --------->CCA1(2)          <---------AtMYB61
            <---------TOE2(3)        <---------YAB1 <---------ARR11(3)          --------->DAG2
        <----------DOF2    --------->ARR11(3)       --------->ARR11(1)        <--------P------>ZmHOX2a(2)
     <----------DOF2<-------TEIL     <---------AHL20(2) >>>>>>>>>>WRKY63   <---------ZAT6<----------DOF2
-------->ALFIN1 <-------TEIL     --------->YAB1   ----------->ARR10 <---------ARR11(3)--------->ARR11(3)
 
aattggggcttctttgaggtacatacacaatatctaacatattattgtttgaaaagatttgactatagctagctcttagtggtaaggttgatcttttgtt  23086200
                                                                ---------->DOF2
                                                            <----------ID1         --------->AtLEC2
                                                     <---------HSFB2a(2)           --------->ANAC58
                                                     --------->HSFB2a(2)           --------->ANAC58
                                                   ========================HOX2a_HOX2a
                                                   <------ZmHOX2a(2)          --------->ANAC58
                                                  <---------ARR11(3)          --------->ANAC46
                <---------ZAT18         --------->MYB52(1)--------->At4g35610 --------->ANAC58
                --------->ZAT18 --------->O2      --------->ARR11(3)<------ZmHOX2a(1)         ------
 
aatttcatttttcagatagtgaaccatggattaccacatgacttaatggacaagatcgagaagatgacaaaggaccattacaagacatgccaagaacaaa  23086300
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AGI:  At1g62380.1   
Description:  ACO2 (ACC OXIDASE 2). similar to 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative [Arabidopsis thaliana] (TAIR:AT1G12010.1); similar to ACC oxidase [Brassica oleracea] (GB:CAA57284.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123)
Range:  from: 23085835    to: 23087918    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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