Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------ARR14(2)                                                               --------->ARR14(2)                                                              <------ZmHOX2a(1)       <---------ZAT2                                                        <---------GLK1(1)             --------->At4g35610                          <---------YAB1          --------->LBD16                     <---------At4g35610                    --------->ARR14(2)           <---------HSFB2a(2)                <---------ZAT18              --------->YAB1                     --------->HSFB2a(2)    --------->CCA1(2)   ---------   <----------DOF2  <---------ARR14(2)   <---------ALFIN1  <---------LBD16          --------->ZAT18 ----->YAB1 <---------ARR11(3)        <---------ZAT18  --------->ARR11(3)      <---------YAB1    ---- -->HSFB2a(2)<---------YAB1          ---------->ID1    <---------ARR11(3)<-------TEIL --------->ZAT2<   aatctctttaacaaaatcatagtatatgctgatagttttgtcccctctcttccccaagatttcaggaactgtagatacaatatgagtgagctcagacctt  22953400                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                   --------->YAB1                 <---------ARR14(2)                                                -------->HAHB4                 --------->ARR14(2)                                               <---------ATHB12             --------->At4g35610                                                  --------->ICU4             <---------At4g35610                                              --------->LBD16<-------        --------->ZAT14                                                      <---------ANAC55(2)        <---------ZAT14                               <---------At4g35610    --------->ANAC55(2)     ------>ZmHOX2a(1)    <---------ANAC58            --------->At4g35610 --------->GLK1(2) <-------- >ARR11(3)   <---------ZAT14             <---------GLK1(1)  --------->ANAC58 --------->ANAC46-------- ------>DOF2 --------->ZAT14           --------->ATHB12     --------->ANAC58 --------->TOE2(3)------- ---------At4g35610       <---------ANAC58      --------->At4g35610 <---------ANAC46 <---------YAB1   gaagctcctctggactgcagaaactgaagcttgggaccaattgatttctcagcatcagctactagcaattgtggataatccgtaatgatgcttgagatct  22953500                                                                                                    <                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                              <------       <---------ZAT14                                          <---------ZAT2               <------- --------->GLK1(2)                                              <---------At4g35610          <------- >ZmHOX2a(2)                                                    --------->ZAT2               -------- --ARR14(2)                                                =============================HOX2a_HOX2a < ->ARR14(2)                                         <----------DOF2                    --------->TOE1(2) ->AGP1--------->ZAT14                            <---------ANAC58        <----------DOF2 ----------- --ARR11(3)                                       <---------ANAC58    <----------DOF2--------->ARR14(2) --AGP1<---------ZAT18                       <------ZmHOX2a(1)  --------->At4g35610  <---------ARR14(2) -GLK1(1)------->TEIL                       <---------YAB1 --------->HSFB2a(2)       --------->GLK1(2) ->ARR11(3)                               --------->YAB1   <---------HSFB2a(2)      <---------GLK1(2) -->CCA1(2)                             --------->GLK1(2)  ------>ZmHOX2a(1)     <------ZmHOX2a(2)  -   gagaatcagtgaacccatgacttctcaatagactcagaacagaatcaggattgcctttgtcctcgaagctgactttctttgagatcgattctgcgacctt  22953600 ---------TOE1(3) -----DOF2 -------->AGL15 ---------AGL15 ---DAG2    <---------ATHB12                                             --------->At4g35610 ----------AGL1                                                      --------->ANAC58 ----------AG                                               <----------DOF2 --------->AGL1                                           --------->ZAT2 <---------At4g35610 ---------TOE2(3)                                         --------->At4g35610 >HVH21--------->ANAC46                         <----------DOF2      --------->ANAC58      <------ZmHOX2a(1) -------->MYB59------->TEIL      ----------->GT1<---------DAG2  <---------TOE2(3)    <---------YAB1   tttaggtaaacccaatgaatcaacgaggtaagagacagaaaaactcaacccttttcgaccagctctaaggctcgcatctgtagcattagcataggagaag  22953700                               <-------TEIL                                       <---------AtLEC2                          <------ZmHOX2a(1)        <---------TGA2(1)       <---------DAG2                       <---------LBD16             --------->TGA2(1)       --------->TOE2(3)                  <----------DOF2                  --------->bZIP60(1)   -------->P                 <---------DAG2--------->ZAT14     --------->ETT(2)      ------>MYB46(1)            <---------GLK1(1)  <---------ZAT14     <---------bZIP60(1)   ------>MYB83            --------->At4g35610--------->ZAT18     <---------ETT(2)    --------->AtMYB61       --------->DAG2  --------->HSFB2a(2)        ----------->STF1     <---------MYB59      ---------->DOF2  <---------HSFB2a(2)      ----------->TGA1       --------->MYB46(3) ----------->GT1----------------->AGL1   ----------->GT1        ----------->RAV1(2)   gaattggaaaaaggagatgccttttcgaggaggttcactggaacgcttaaatgacgacatttcttcaactggaccaacctttttccatggagtatcagag  22953800                   --------->ANAC58                 --------->At4g35610               <-----------RAV1(2)           <---------ATERF1(1)          <---------DEAR3(1)      <---------ANAC46     --------->RAP2.6(3)                                ------>ZmHOX2a(2)    --------->MYB52(1)                     <---------ANAC46                                         <   ----------->HVH21            <---------GLK1(2)     --------->ARR14(2)                            -   ----------->TGA1--------->ANAC58        <---------ANAC58   --------->ANAC58                      < <---------ANAC55(2)  --------->WOX13(1)   <---------ANAC58   --------->ANAC46                 <----- --------->ANAC55(2)------------>CBF       ----------->GT1    --------->ANAC58           ---------->DOF2   aatacatgacgggaggctcagaagcaatctatctgattcttcagttcgtgaaaatggatcgaccaggctacgaagattagtctcaaaattcaaaagttac  22953900                              <---------LBD16                           <------ZmHOX2a(2)                          --------->ARR11(3)                          <---------ARR11(3)                      ---------->DOF2                    <------NtERF2                   --------->LBD16                   ------>NtERF2                   <---------RAP2.6(3)                  --------->RAP2.3(2)                  --------->RAP2.3(3)                  >>>>>>>>>AtERF-4  <---------MYB46(3)                  >>>>>>>>>AtERF-3 <---------AtMYB61                  --------->RAP2.6(2)                                                     <---------LBD16                  --------->DEAR3(1)<------MYB46(1)                                    <------------CBF                  <---------ATERF1(2)                      --------->GLK1(1)      <-----------------AGL3                  --------->ATERF1(2)         --------->YAB1                    ------>MYB83 ---------ZAT18  --------->RAP2.3(1)<------MYB83 <---------GLK1(2)              ------>MYB46(1) -------->ZAT14  --------->ERF1 --------->MYB55(2)<---------ARR11(3)          --------->MYB46(3) ---------ZAT14 <---------ATERF1(1)--------->ALFIN1        <---------GLK1(1)  --------->DEAR3(1)    < ----At5g28300 --------->ALFIN1 <---------MYB46(3)--------->ARR11(3)         --------->DEAR3(2) -----   agtgaaccatagatcgagtgccgccaaagatcgacgggtggtcgactatcaaaatctcatgaaatccaaaatcacacagaccgaccctaaattggggaat  22954000                                                            <---------YAB1                                                           <---------ARR11(3)                                                           <---------AHL20(1)                                                           --------->AHL20(1)                                                         <---------ARR11(3)                                                         --------->ARR11(3)                                                         --------->AHL20(1)                                                         <---------AHL20(1)                                                    ----------->GT1                                                --------->ATHB12                                                <---------ICU4                                               <---------ATHB12                                               <---------YAB1                                      --                                              <---------TOE2(3)                                    --                                             <---------DOF5.7(2)                                   <-            --------->DAG2                --------->TOE2(3)--------->ARR11(3)                  >>>>>> ----------->GT1          <---------TOE1(3)--------->DOF5.7(2)                             ---------- ------ZmHOX2a(1)<---------YAB1  <---------YAB1--------->ICU4                        --------->TOE2(3) ---->ICU4---------->DOF2 <---------TOE2(3)<---------MYB52(1)          --------->AHL20(2)---------->DOF2   gaggagtaaaaaaaaaggtatgatttttagggtttatgattcttcgttaatgatttgaaaatatttttgaatataaaatacaaataacatcaaaagtaac  22954100                                                                                     ---------->DOF2                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                             <---------ZAT14                                ---------->DOF2                              --------->ZAT14 ------->MYB52(1)           <---------HSFB2a(2)                              --------->ZAT18     <--- ------->ARR14(2)           <---------ANAC46                              --------->GLK1(1)      ---- --------ARR14(2)     <---------TOE1(3)                                  --------->ARR14(2)      <--- >>>MYB98             <---------TOE2(3)                ----------->GT1   <---------ARR14(2)      <--- ->GT1    ----------->HVH21<---------LBD16    ----------->GT1 <-----------GT1<---------ZAT18     ----   atatcggactcactgacagagttcaaggtttcggaaaagagattgaaattgaaaatatagttattttccaagtcggaactgcacacaaaaagaaacatgt  22954200                                                          ----------->HVH21                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     --------->ARR14(2)                        <-----           ----------->GT1    --------->LBD16        <---------ARR14(2)                        <-----         ---------->DOF2 --------->GLK1(1)           <---------ARR11(3)                     --------- ------bZIP60(1)         <----------DOF2             --------->ARR11(3)                     --------- ----->bZIP60(1)         <---------GLK1(1)         ----------->ARR10                      <---------At4g35610 ------ANAC46           <---------ANAC58      --------->DAG2                              --------->At4g35610 ------ETT(2)           <---------ANAC58    ---------->DOF2                             <-----------RAV1(2) ------->GT1      --------->GLK1(2)<-------TEIL----------->GT1        <---------YAB1  --------->TOE2(3)   cgtcaaattacaaaagtaaaaatcgggctttccgagattcatacataaaaggtaagatccttgacaagacttctgatttatgacacaacctcaggtgaag  22954300  Previous    Next  AGI:  At1g62085.1    Description:  mitochondrial transcription termination factor family protein / mTERF family protein. similar to mitochondrial transcription termination factor family protein / mTERF family protein [Arabidopsis thaliana] (TAIR:AT1G62110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40592.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 22952422    to: 22953807    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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