Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------CCA1(2)                                                       <----------DOF2                                                   <---------GLK1(2)                                                  -------->HAHB4                                                 <---------ATHB12                                                 --------->ICU4         ------>ZmHOX2a(2)                       <---------YAB1        <------ZmHOX2a(2)                       <---------TOE2(3)        =============HOX2a_HOX2a              <---------AHL20(2)       --------->ARR11(3)                    <---------AHL20(2)              <---------GLK1(2)       --------->AGP1                        --------->AHL20(2)           --------->YAB1-------------       <---------ARR11(3)      <---------HSFB2a(2)<--------ATHB1        --------->GLK1(2) ------->AHL20(2)        <---------ARR11(3)  --------->AHL20(1)        --------->YAB1   <------------ ---WOX13(1)  <------ZmHOX2a(1)--------->HSFB2a(2)<---------ICU4<----------DOF2       <<<<<<<<<TBF1 -   ataaattgagatcttaggaagaaacaatttcttccaaaacatcgaaatttaatgattctttcttatctttcaagaatcagagtctttcttcttcttatgg  22938600                                                                           <------NtERF2                                                                          --------->LBD16                                                                          ------>NtERF2                                                                          <---------ATERF1(1)                                                                         --------->ATERF1(2)                                                                         --------->RAP2.3(3)                                                                         <---------ATERF1(2)                                                                         --------->RAP2.6(2)                                                                         --------->RRTF1(2)                                                                         --------->RAP2.3(2)                                                                         --------->DEAR3(1)                                                                         --------->RRTF1(3)                                                                         --------->DREB2C(2)                                                                        --------->ERF1                                                                        <---------LBD16                                                                        --------->RAP2.3(1)                                                                        --------->ATERF1(1)                                      <---------ICU4                   ------>NtERF2                                    --------->GLK1(2)                 --------->DEAR3(1)                                  --------->MYB46(3)                 --------->MYB46(3)                         --------->ANAC55(2)                         --------->DEAR3(2)    <---------AtMYB61   --------->GLK1(2)     --------->ANAC58                           <---------At5g28300 <----------DOF2  <---------GLK1(2)      --------->ANAC58                      --------->ARR11(3)      <---------ANAC58  <---------ARR11(3)     --------->ANAC46                      <---------ARR11(3)  <---------ANAC58 -->AGL15              --------->MYB52(1)                  --------------------->WRI1  <---------ANAC58 ---AGL15             --------->TOE2(2)           <------MYB83--------->GLK1(1) <----------DOF2 ---------->ARR10     --------->TOE1(2)           <------MYB46(1)  <-----------GT1 <---------ANAC58   acaagattcttcatccacttaaaacttacgaaatcaacaatcttggctgatttggtttggccagagttcttaccgccggcatctttcttgcttttggtgt  22938700                    --------->ARR14(2)                    <---------ARR14(2)                  --------->LBD16                 --------->LBD16            --------->At4g35610            --------->GLK1(1)                             <----------DOF2            <---------At4g35610                         <---------MYB46(3)            <---------GLK1(1)                       <---------DEAR3(1)        ------>NtERF2         --------->ARR14(2) <---------ZAT2                             ---------        --------->LBD16       <---------ARR14(2) --------->ZAT2                  <----------DOF2       --------->ANAC46     --------->LBD16     <---------ALFIN1              --------->ARR11(3)      <---------LBD16<------ZmHOX2a(2)    ------>ZmHOX2a(2)                   <---------ARR11(3)     ------>ZmHOX2a(1)    <---------LBD16--------->At4g35610                 <---------GLK1(1)     =======================HOX2a_HOX2a  <---------At4g35610                 --------->GLK1(1)   ----   tgtcttcctccggcatctccccgatccctccggttccccattgatctgcccaactcggtgcttcacttgccatattgcgatatcttttcgcaaactaaat  22938800                                                --------->YAB1                                         ---------->DOF2                   <---------ATHB51                                       --------->YAB1                      --------->AHL20(2)             <---------ARR11(3)       <---------ATHB12                <-------TEIL    --------->YAB1                   ------>MYB83                 <---------ZAT6   <---------YAB1--------->YAB1      ------>MYB46(1)           --------->HSFB2a(2)               <--- >AHL20(2) --------->MYB59          --------->WOX13(1)      --------->ARR11(3)    <---------MYB52(1) ------->GT1 --------->ARR11(3)   --------->MYB46(3)  --------->YAB1 --------->CCA1(2)  --------->YAB1   agaaaatcatagttagatatcaaaatgaattcttcaaccaatcaaaagaaacataataaaaacatctagagatacaaattattcgttttttcatattgga  22938900                --------->YAB1            <---------ANAC58            <---------ANAC58                       <---------ANAC46                  ---------->DOF2        <---------ANAC58                         <-----------GT1                  <------ZmHOX2a(1)        <---------ANAC58                 ----------->GT1             --------->ARR11(3)   <---------ICU4         --------->AHL20(2)  <---------ICU4         <---------ARR11(3) ---ZmHOX2a(2) <-------TEIL            ---------->DOF2    --------->ICU4   <----------DOF2      <----   tcaaaacatgacttacgttcataactaagaaaatagaagagaaaagaaaaattacctgtaatgttttgagaggtcttctttggaggagaaagacgatttt  22939000                                                                                  <------------CBF                       <------NtERF2                                            --------->ARR11(3)                      --------->LBD16                                           <---------AHL20(2)           <---------ANAC58                                 <----------DOF2     <---------AHL20(1)           <---------ANAC58    <----------ID1          <----------DOF2          --------->AHL20(1)  <        *TSS        <---------LBD16            <-----------RAV1(1)        ----------->GT1    <------- -----YAB1--------->ATHB12   ----------->GT1   --------->ALFIN1       ---------->DOF2       <--------   gatttagcaaaatgagtgccaacgcggagaatggagacaaatagtagatgtgttgttcttttctttattagacaaagtgtaaaatattgtagtttatgtt  22939100                                                           <---------TOE1(3)                                                           --------->MYB59                                                           <---------TOE2(3)  <---------DAG2      <------------------------ANAC81              <---------AHL20(2)         <----------DOF2      <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------CCA1(1)            ------->TEIL    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <---------RVE1(1)          <---------ZAT14 ----------DOF2                               <---------ARR11(3)          <---------ZAT18         --- ----RAV1(1)                                  <---------AHL20(1)          --------->ZAT18     <------ -TOE2(3)               <----------DOF2       --------->ARR11(3)   <----------DOF2  <-----------GT1   gtctttttttttttttttttttttatctttagatttgttaatgtgtaagatattttttttttaggttgtctttgaatgcactttattaactcaagtttgt  22939200              --------->ANAC58           <---------ANAC58                           --------->ARR11(3)              ---------->ID1           <---------ANAC58                           <---------ARR11(3)          <---------ICU4 <---------ARR14(2)                         ---------->DOF2                      --------->ICU4 --------->ARR14(2)                   <---------TOE2(3)                --------->ANAC46           --- ------>MYB52(2)                      --------->MYB59--------->YAB1    --------->ANAC58          <--- ---MYB46(3)  --------->ANAC58   --------->ICU4     <---------YAB1     --------->ANAC58         -----   tcgtttccgacttgcgaagcaaacattgttttggaatatttaggtataaagcatatgatattggtcgtgatttaagccatctaattatgtcccattccat  22939300      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    --------->ARR11(3)                                                                              -    <---------ARR11(3)                                                                           ----    <---------ARR14(2)                                                                           <---    <-----------ARR10                                                                            <---    --------->AGP1                                                                      <------------    --------->ARR14(2)         <---------At4g35610                                      ------->TEIL<    <---------AGP1          <---------At5g28300                                         ------------- -------->HVH21            <-----------GT1<----------DOF2                            <---------ANAC55(2) --------HVH21     <----------DOF2  ---------->DOF2      <---------ARR11(3)          <---------YAB1 < ---->O2     <---------TOE1(2) --------->At4g35610       --------->ARR11(3) --------->ZAT18      ----   gtgacagatctatcttatgttctttagatttacagctaaaaagactttattttcacataaatcttatgcaattctaagtgttctattatgtatgtactat  22939400                                                                                                 ----     <-----------GT1                                                                             ---- -------->AHL20(2)                                                                          --------- ----->AHL20(1)                         --------->ANAC55(2)                                 --------- ------ARR11(3)                         <---------ANAC55(2)                          --------->CCA1(2) ------AHL20(1)                         <------MYB83                                 --------->GLK1(1) ---AtSPL8                              ----------->GT1                     --------->AHL20(2)   <--- ---------AHL20(2)                      <------MYB46(1)       <----------DOF2       --------->ARR14(2) -->AtSPL8                             --------->MYB59    ---------->ID1    <---------AHL20(2)   <--- ---------YAB1                    <---------YAB1  <---------TOE1(2)    <---------ARR11(3) ---------->DOF2 ----->AHL20(2)              <------ZmHOX2a(1)    <---------TOE2(2)  ----------->GT1<---------ARR14(2)   atattattaacttcaacttctagtctcttaaggactctcattaggtaattcataggttttgtagctttgtcaagttatttaaatcggatatacaaagcca  22939500  Previous    Next  AGI:  At1g62045.1    Description:  similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT1G11740.1); similar to unknown [Brassica rapa] (GB:ABL97958.1); contains domain PTHR12447 (PTHR12447) Range:  from: 22938353    to: 22939008    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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