Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->CCA1(2)                                                                              =======================HOX2a_HOX2a                                                                              <------ZmHOX2a(2)                               <---------ANAC58                              --------->ARR14(2)                               <---------ANAC58                        ------->PIF5                              --------->ZAT2                           <-------PIF5<---------ARR14(2)                           <---------ANAC58                          <---------LBD16                           <---------ANAC58                 =========================HOX2a_HOX2a                         <-----------GT1                    --------->LBD16  <---------ARR14(2)                     <---------AHL20(1)                     <---------HSFB2a(2)    --------->ARR14(2)                     --------->AHL20(1)                     ------>ZmHOX2a(1)--------->AGP1        --                     <---------AHL20(2)                    --------->TOE1(2) --------->ARR11(3)   --- --AHL20(2)       --------->AHL20(1)                    --------->ARR14(2)   <---------ARR11(3)   --- ->AHL20(2)       --------->AHL20(2)   --------->ARR11(3)  <---------LBD16  --------->GLK1(1)    ---- >AHL20(2)        <---------AHL20(2)   <---------ARR11(3)  --------->TOE2(2)<---------GLK1(1)   <---- -AHL20(2)     --------->YAB1------>ZmHOX2a(1)          <---------ARR14(2) ----------->ARR10  <------ZmHOX2a(1)   ttcgagtttgtatacaaaaataaaatatttcctgcttgcaagataattttcagaaacaaatcctgggagaccacggggagatccaaattcgacgaaggag  22843300          <---------ANAC58          <---------ANAC58          <---------ANAC46         <-------TEIL  <---------HSFB2a(2)                                             <---------ANAC46               ----  --------->HSFB2a(2)                                             <---------ANAC58              ----- ---->NtERF2 --------->SPL7                                       <---------ANAC58              ----- ------>ANAC58            ----------->TGA1                       ------->TEIL                   ----- ------>ANAC58       --------->ANAC46                     <----------DOF2       <---------ARR14(2) ----->ATERF1(1)   --------->At4g35610                <---------GLK1(2)  <----------ID1      <------- -----ATERF1(1)<-----------HVH21               --------->ARR11(3)<-------TEIL   --------->ARR14(2)<--   acgcctagaagtgcgtatgtcatccgaaatgacgaaaactatatgcgaagaaattggattctttatgtacgtggaaagacaaaatccacttcgtttacac  22843400        --------->ARR11(3)    <-----------GT1               --------->ANAC55(2)   <---------AHL20(2)             --------->ANAC46                                  --------->ANAC58   --------->AHL20(2)             <---------ANAC55(2)      --------->DAG2    <---------ANAC58      <- ----->TOE2(3)                   <---------LBD16          ---------->DOF2    <---------AtLEC2    <--- ---->ANAC58          --------->YAB1                 ---------->DOF2         <---------ANAC58 ------- ---->ANAC58          <------ZmHOX2a(1)           --------->ANAC46          <<<<<<<<<<ABI3   <------- ---->ANAC46        <---------TOE2(2)             --------->ANAC58          <<<<<<<<<<FUS3--------->ICU4 --REM1(2)          <---------TOE1(2)            --------->SPL7        <---------AHL20(2) XXXXXXXXXXX -------MYB52(1)  --------->TOE1(2) <----------ID1--------->ANAC58   <----------DOF2--------->ANAC58   gttaattaactatcttgaatcgtaggataatttcatacgggacaaaaaccatacgcaaagaaaagttgattctttatttgcatggcaagaacattatgat  22843500   ---------->DOF2                                                       <---------MYB46(3) ---------ID1                     <-----------GT1                 <------------CBF ------ICU4         <-------TEIL  --------->ZAT6                 --------->ATHB12 -->YAB1   <----------ID1       <-----------GT1            --------->YAB1----------->GT1 --YAB1 ---------->DOF2   <---------ANAC58          <---------ATHB12   <------------CBF XXXXXXXXX>MIR3932A/B     <---------ANAC58    --------->GLK1(2) <-------TEIL                    <----   aactacaaagaaaagaacaaaattcatttcgtttttacactatataagaatccaatagttttcatattcattggattgttaaacatttgacttctgtata  22843600                                                  -------->P                                               --------->ZAT2                                               --------->At4g35610                                               <---------ZAT2                           <-------TEIL   <---------LBD16*TSS  <---------At5g28300               --------->TOE1(3)    ---------->DOF2     --------->YAB1                            <XX    <----------DOF2        ------------>CBF --------->LBD16--------->YAB1                       ----- <---------ALFIN1         --------->CCA1(2)--------->ANAC46<---------ICU4                ---------->DOF2 -------GT1    --------->TOE2(3)---------->DOF2<---------At4g35610               <---------YAB1------   acaacacttttaaaaaaccttaatagagatacaataaagaaagacccggagctaccatggataatgaccgtggaatatttcatatgatggagaaagatgg  22843700                                                       --------->LBD16                                                     <---------LBD16                                                    ------>ZmHOX2a(1)        <---------TOE1(2)                       --------->AtMYB61           <---------ICU4      --------->TOE2(3)                         ------->GAMYB              <---------ATHB51    <---------YAB1                             --------->MYB46(3)       ----------->GT1      <------- XXXXXXXXXXXXXXXXXXMIR169D-G                  ------>MYB46(1)  --------->YAB1--------->KAN4(2) ---->At5g28300                               ------>MYB83     ----------->GT1              --------- ----->GT1         --------->DEAR3(1)         -------->P<---------MYB52(1) --------->ICU4   <--------   taaattatccttggtatatcgccctcccataatacaaactcgaagtccaacctcctccggtagaatagtaagtagcgataattcccttcttcaacctttt  22843800                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                <----                                                   <---------ARR11(3)                           -----                                                   --------->ARR11(3)                           <----                                                   <---------GLK1(2)                            -----                                         <---------ARR14(2)                                     <----                                         --------->ARR14(2)                                     <----                                       --------->LBD16                                          -----                                      <---------ANAC58                                        <------ ---DOF2                              <---------ANAC58           <---------YAB1           --------->AHL20(2) >TOE2(3)                         <----------DOF2----------->ARR10                     --------->YAB1 -DAG2              ----------->GT1   <---------ANAC46          >>>>>>>>>>>>>>>>>LFY  <---------YAB1   tttcttatgccctatagtacgatggaaaaatagagactttccgtataccataagattttcttcaattaccaatgtcccattcggttctatcataaattac  22843900      <---------AHL20(2)     <---------AHL20(2)     --------->AHL20(2) --------->ICU4 ------>TGA2(2) --------TGA1               --------------->AtSPL8 ----->TOE2(3)          <---------ICU4 ---->ANAC46           <---------YAB1 -----ANAC55(2)       <---------ARR11(3) -----ANAC58          --------->ARR11(3)                                                  --------->ANAC58 ---->bZIP60(1)      --------->YAB1                                                       --------->AtLEC2 -----TGA2(1)       <---------YAB1                                                        --------->ANAC58 ---->TGA2(1)       --------->ICU4                                                      <---------ANAC58 -----bZIP60(1)   <---------ICU4                      --------->YAB1                    <---------ANAC58 -----ANAC58      --------->YAB1             <---------AtMYB61--------->GLK1(2)        <---------ZAT18 ---->ANAC55(2)  --------->ICU4       <----------DOF2 --------->TOE2(3)                --------->ZAT14 -----GT1        <---------YAB1       <---------MYB52(1) ---------->DOF2      <---------MYB46(3)   gtcagaattaaatatgctcatgatgatcattttgtactccctttgttttggtgcaacgataaagaatttgatgtcaatggtggatgcagtgcatgcaatg  22844000                                                                                                    -                          --------->HSFB2a(2)                                                   <----                          <---------HSFB2a(2)------->TEIL                                      ------                   <---------YAB1     <---------AHL20(2)                                      ------>MYB83                 <---------ICU4       <---------AHL20(1)     <---------ANAC58                 ------>MYB46(1)                --------->ICU4        --------->AHL20(2)     <---------ANAC58              --------->MYB46(3)                <---------YAB1        --------->AHL20(1)   <-----------HVH21   --------->AHL20(2)   <              --------->YAB1       --------->YAB1      --------->GLK1(2)  --------->AHL20(2)<--------             --------->ICU4     ----------->GT1   ---------->DOF2    <---------ALFIN1     -------->P<   gctcatattttggcactgattattatttctgtaactgtaataaaatgtatcacaaagaatgtgtcgagtctccacttaaaataaaacacccttaccaccc  22844100                                                            <---------HSFB2a(2)                                                            --------->HSFB2a(2)        <---------AHL20(2)                                                          <---------ANAC46             <---------YAB1 -------->ZAT14                                        <-----------RAV1(1)       ----------->GT1 ------CDC5 <---------TOE1(2)                          ===============================RAV <---------YAB1 ----->RAV1(2)                <----------DOF2  <---------ANAC46                 --------->MYB59 ----- ---------ZAT14       --------->YAB1           <---------ANAC58                <-----------RAV1(2) -ALFIN1--------->HSFB2a(2)------>ZmHOX2a(1)   <---------ANAC58              <-----------HVH21  <---- ---------ZAT18      <-------TEIL <---------At4g35610 <---------TOE2(3)   <-----------RAV1(2)  ------   tgagcactctctcgaatgttacattcatcctccttttgctcacaatattgagtgtttatgttgtggaagaatagcatcaggtcaggtatattattgttcc  22844200  Previous    Next  AGI:  At1g61830.1    Description:  pseudogene, CHP-rich zinc finger protein, putative, similar to putative CHP-rich zinc finger protein GI:9293934 from (Arabidopsis thaliana) Range:  from: 22843657    to: 22845525    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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